RNA–Protein interactions for RNA: ENST00000363313.1

RNU6-238P-201, Transcript of RNA, U6 small nuclear 238, pseudogene, humanhuman

BASIC

Gene RNU6-238P, Length 106 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-238P-201ENST00000363313 OR1A2Q9Y585 309 aa0.64□□□□□ -2.31
RNU6-238P-201ENST00000363313 FAM169AQ9Y6X4 670 aa0.64□□□□□ -2.31
RNU6-238P-201ENST00000363313 MUC16Q8WXI7 14507 aa0.64□□□□□ -2.31
RNU6-238P-201ENST00000363313 IGHV7-81A0A0B4J1V7 117 aa0.63□□□□□ -2.31
RNU6-238P-201ENST00000363313 IGHV3-64DA0A0J9YX35 117 aa0.63□□□□□ -2.31
RNU6-238P-201ENST00000363313 CYB561D2O14569 222 aa0.63□□□□□ -2.31
RNU6-238P-201ENST00000363313 FCER2P06734 321 aa0.63□□□□□ -2.31
RNU6-238P-201ENST00000363313 CYP3A5P20815 502 aa0.63□□□□□ -2.31
RNU6-238P-201ENST00000363313 OR1D2P34982 312 aa0.63□□□□□ -2.31
RNU6-238P-201ENST00000363313 BTDP43251 543 aa0.63□□□□□ -2.31
RNU6-238P-201ENST00000363313 IER3P46695 156 aa0.63□□□□□ -2.31
RNU6-238P-201ENST00000363313 RPS9P46781 194 aaKnown RBP0.63□□□□□ -2.31
RNU6-238P-201ENST00000363313 HSPA14Q0VDF9 509 aa0.63□□□□□ -2.31
RNU6-238P-201ENST00000363313 CAMK4Q16566 473 aa0.63□□□□□ -2.31
RNU6-238P-201ENST00000363313 BMP2KLQ5H9B9 411 aa0.63□□□□□ -2.31
RNU6-238P-201ENST00000363313 ZNF311Q5JNZ3 666 aa0.63□□□□□ -2.31
RNU6-238P-201ENST00000363313 MEDAGQ5VYS4 303 aa0.63□□□□□ -2.31
RNU6-238P-201ENST00000363313 C1orf122Q6ZSJ8 110 aa0.63□□□□□ -2.31
RNU6-238P-201ENST00000363313 SMC5Q8IY18 1101 aa0.63□□□□□ -2.31
RNU6-238P-201ENST00000363313 MCOLN2Q8IZK6 566 aa0.63□□□□□ -2.31
RNU6-238P-201ENST00000363313 LINC00304Q8N9R0 145 aa0.63□□□□□ -2.31
RNU6-238P-201ENST00000363313 DUSP18Q8NEJ0 188 aa0.63□□□□□ -2.31
RNU6-238P-201ENST00000363313 UBALD1Q8TB05 177 aa0.63□□□□□ -2.31
RNU6-238P-201ENST00000363313 CKAP2Q8WWK9 683 aa0.63□□□□□ -2.31
RNU6-238P-201ENST00000363313 PRCCQ92733 491 aaPredicted RBP0.63□□□□□ -2.31
RNU6-238P-201ENST00000363313 SMARCD2Q92925 531 aa0.63□□□□□ -2.31
RNU6-238P-201ENST00000363313 MCHR2Q969V1 340 aa0.63□□□□□ -2.31
RNU6-238P-201ENST00000363313 NUSAP1Q9BXS6 441 aaKnown RBP0.63□□□□□ -2.31
RNU6-238P-201ENST00000363313 ULBP2Q9BZM5 246 aa0.63□□□□□ -2.31
RNU6-238P-201ENST00000363313 CCDC68Q9H2F9 335 aa0.63□□□□□ -2.31
RNU6-238P-201ENST00000363313 CXXC4Q9H2H0 198 aa0.63□□□□□ -2.31
RNU6-238P-201ENST00000363313 LMAN1LQ9HAT1 526 aa0.63□□□□□ -2.31
RNU6-238P-201ENST00000363313 EML4Q9HC35 981 aaKnown RBP0.63□□□□□ -2.31
RNU6-238P-201ENST00000363313 ESM1Q9NQ30 184 aa0.63□□□□□ -2.31
RNU6-238P-201ENST00000363313 NSMCE4AQ9NXX6 385 aa0.63□□□□□ -2.31
RNU6-238P-201ENST00000363313 LIPGQ9Y5X9 500 aa0.63□□□□□ -2.31
RNU6-238P-201ENST00000363313 TRAV40A0A0B4J280 105 aa0.62□□□□□ -2.31
RNU6-238P-201ENST00000363313 ANKRD18BA2A2Z9 1011 aa0.62□□□□□ -2.31
RNU6-238P-201ENST00000363313 PSMB11A5LHX3 300 aa0.62□□□□□ -2.31
RNU6-238P-201ENST00000363313 DHRS7CA6NNS2 312 aa0.62□□□□□ -2.31
RNU6-238P-201ENST00000363313 COLCA2A8K830 154 aa0.62□□□□□ -2.31
RNU6-238P-201ENST00000363313 NPIPB7O75200 414 aa0.62□□□□□ -2.31
RNU6-238P-201ENST00000363313 PDE5AO76074 875 aa0.62□□□□□ -2.31
RNU6-238P-201ENST00000363313 RCBTB2O95199 551 aa0.62□□□□□ -2.31
RNU6-238P-201ENST00000363313 SLC25A27O95847 323 aa0.62□□□□□ -2.31
RNU6-238P-201ENST00000363313 HOXB7P09629 217 aa0.62□□□□□ -2.31
RNU6-238P-201ENST00000363313 ARL14EPLP0DKL9 152 aa0.62□□□□□ -2.31
RNU6-238P-201ENST00000363313 MYBL1P10243 752 aa0.62□□□□□ -2.31
RNU6-238P-201ENST00000363313 MBL2P11226 248 aaPredicted RBP0.62□□□□□ -2.31
RNU6-238P-201ENST00000363313 TIA1P31483 386 aaKnown RBP eCLIP0.62□□□□□ -2.31
RNU6-238P-201ENST00000363313 NF2P35240 595 aa0.62□□□□□ -2.31
RNU6-238P-201ENST00000363313 SAA4P35542 130 aa0.62□□□□□ -2.31
RNU6-238P-201ENST00000363313 ZNF85Q03923 595 aa0.62□□□□□ -2.31
RNU6-238P-201ENST00000363313 SRSF5Q13243 272 aaKnown RBP0.62□□□□□ -2.31
RNU6-238P-201ENST00000363313 DPYSL3Q14195 570 aa0.62□□□□□ -2.31
RNU6-238P-201ENST00000363313 GK2Q14410 553 aaPredicted RBP0.62□□□□□ -2.31
RNU6-238P-201ENST00000363313 PRSS8Q16651 343 aa0.62□□□□□ -2.31
RNU6-238P-201ENST00000363313 LRRC36Q1X8D7 754 aa0.62□□□□□ -2.31
RNU6-238P-201ENST00000363313 ABCA11PQ4W5N1 156 aa0.62□□□□□ -2.31
RNU6-238P-201ENST00000363313 ERMARDQ5T6L9 678 aa0.62□□□□□ -2.31
RNU6-238P-201ENST00000363313 PM20D1Q6GTS8 502 aa0.62□□□□□ -2.31
RNU6-238P-201ENST00000363313 KRT80Q6KB66 452 aa0.62□□□□□ -2.31
RNU6-238P-201ENST00000363313 UFSP1Q6NVU6 142 aa0.62□□□□□ -2.31
RNU6-238P-201ENST00000363313 CXCL17Q6UXB2 119 aa0.62□□□□□ -2.31
RNU6-238P-201ENST00000363313 MAATS1Q7Z4T9 603 aa0.62□□□□□ -2.31
RNU6-238P-201ENST00000363313 PRPF39Q86UA1 669 aaKnown RBP0.62□□□□□ -2.31
RNU6-238P-201ENST00000363313 LUZP1Q86V48 1076 aa0.62□□□□□ -2.31
RNU6-238P-201ENST00000363313 TTC5Q8N0Z6 440 aa0.62□□□□□ -2.31
RNU6-238P-201ENST00000363313 SMYD1Q8NB12 490 aa0.62□□□□□ -2.31
RNU6-238P-201ENST00000363313 TRPV3Q8NET8 790 aa0.62□□□□□ -2.31
RNU6-238P-201ENST00000363313 OR51G1Q8NGK1 321 aa0.62□□□□□ -2.31
RNU6-238P-201ENST00000363313 OR9A1PQ8NGU1 263 aa0.62□□□□□ -2.31
RNU6-238P-201ENST00000363313 OCC1Q8TAD7 63 aa0.62□□□□□ -2.31
RNU6-238P-201ENST00000363313 C18orf25Q96B23 403 aaPredicted RBP0.62□□□□□ -2.31
RNU6-238P-201ENST00000363313 SPATA17Q96L03 361 aa0.62□□□□□ -2.31
RNU6-238P-201ENST00000363313 PELOQ9BRX2 385 aaKnown RBP0.62□□□□□ -2.31
RNU6-238P-201ENST00000363313 PLA2G2FQ9BZM2 168 aa0.62□□□□□ -2.31
RNU6-238P-201ENST00000363313 TPK1Q9H3S4 243 aa0.62□□□□□ -2.31
RNU6-238P-201ENST00000363313 ZHX3Q9H4I2 956 aa0.62□□□□□ -2.31
RNU6-238P-201ENST00000363313 ZDHHC11Q9H8X9 412 aa0.62□□□□□ -2.31
RNU6-238P-201ENST00000363313 LHX9Q9NQ69 397 aa0.62□□□□□ -2.31
RNU6-238P-201ENST00000363313 MRPL17Q9NRX2 175 aaKnown RBP0.62□□□□□ -2.31
RNU6-238P-201ENST00000363313 RBAKQ9NYW8 714 aaPredicted RBP0.62□□□□□ -2.31
RNU6-238P-201ENST00000363313 ERVK-19Q9WJR5 959 aa0.62□□□□□ -2.31
RNU6-238P-201ENST00000363313 SYNJ2O15056 1496 aa0.61□□□□□ -2.31
RNU6-238P-201ENST00000363313 MYO16Q9Y6X6 1858 aa0.61□□□□□ -2.31
RNU6-238P-201ENST00000363313 A0A0J9YXY3 114 aa0.61□□□□□ -2.31
RNU6-238P-201ENST00000363313 ANXA2P2A6NMY6 339 aa0.61□□□□□ -2.31
RNU6-238P-201ENST00000363313 SPAG7O75391 227 aa0.61□□□□□ -2.31
RNU6-238P-201ENST00000363313 CABYRO75952 493 aa0.61□□□□□ -2.31
RNU6-238P-201ENST00000363313 OAS1P00973 400 aaKnown RBP0.61□□□□□ -2.31
RNU6-238P-201ENST00000363313 GHRP10912 638 aa0.61□□□□□ -2.31
RNU6-238P-201ENST00000363313 GJB2P29033 226 aa0.61□□□□□ -2.31
RNU6-238P-201ENST00000363313 NPBWR1P48145 328 aa0.61□□□□□ -2.31
RNU6-238P-201ENST00000363313 ACTA1P68133 377 aa0.61□□□□□ -2.31
RNU6-238P-201ENST00000363313 PUDPQ08623 228 aa0.61□□□□□ -2.31
RNU6-238P-201ENST00000363313 MADCAM1Q13477 382 aa0.61□□□□□ -2.31
RNU6-238P-201ENST00000363313 FAM83EQ2M2I3 478 aa0.61□□□□□ -2.31
RNU6-238P-201ENST00000363313 TWISTNBQ3B726 338 aaPredicted RBP0.61□□□□□ -2.31
RNU6-238P-201ENST00000363313 GPR139Q6DWJ6 353 aa0.61□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms