RNA–Protein interactions for RNA: ENST00000361781.6

SGMS1-202, Transcript of sphingomyelin synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGMS1, Length 3,744 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-202ENST00000361781 EXOSC1Q9Y3B2 195 aaKnown RBP12.92□□□□□ -0.34
SGMS1-202ENST00000361781 WASH3PC4AMC7 463 aa12.91□□□□□ -0.34
SGMS1-202ENST00000361781 H3BNC9 293 aa12.91□□□□□ -0.34
SGMS1-202ENST00000361781 CA12O43570 354 aa12.91□□□□□ -0.34
SGMS1-202ENST00000361781 SOX30O94993 753 aa12.91□□□□□ -0.34
SGMS1-202ENST00000361781 HMGA1P17096 107 aaKnown RBP12.91□□□□□ -0.34
SGMS1-202ENST00000361781 PRKACBP22694 351 aa12.91□□□□□ -0.34
SGMS1-202ENST00000361781 STAT5AP42229 794 aa12.91□□□□□ -0.34
SGMS1-202ENST00000361781 NNATQ16517 81 aa12.91□□□□□ -0.34
SGMS1-202ENST00000361781 SLCO4C1Q6ZQN7 724 aa12.91□□□□□ -0.34
SGMS1-202ENST00000361781 LSRQ86X29 649 aaPredicted RBP12.91□□□□□ -0.34
SGMS1-202ENST00000361781 COX18Q8N8Q8 333 aa12.91□□□□□ -0.34
SGMS1-202ENST00000361781 OR6T1Q8NGN1 323 aa12.91□□□□□ -0.34
SGMS1-202ENST00000361781 C16orf58Q96GQ5 468 aa12.91□□□□□ -0.34
SGMS1-202ENST00000361781 CASD1Q96PB1 797 aa12.91□□□□□ -0.34
SGMS1-202ENST00000361781 OR4K3Q96R72 315 aa12.91□□□□□ -0.34
SGMS1-202ENST00000361781 MKRN2Q9H000 416 aaKnown RBP12.91□□□□□ -0.34
SGMS1-202ENST00000361781 LMAN2LQ9H0V9 348 aa12.91□□□□□ -0.34
SGMS1-202ENST00000361781 TEX10Q9NXF1 929 aaPredicted RBP12.91□□□□□ -0.34
SGMS1-202ENST00000361781 CCL26Q9Y258 94 aa12.91□□□□□ -0.34
SGMS1-202ENST00000361781 LOC100509620A0A075B734 347 aa12.91□□□□□ -0.34
SGMS1-202ENST00000361781 TBC1D3DA0A087WVF3 549 aa12.91□□□□□ -0.34
SGMS1-202ENST00000361781 TBC1D3IA0A087WXS9 549 aa12.91□□□□□ -0.34
SGMS1-202ENST00000361781 TBC1D3EA0A087X179 549 aa12.91□□□□□ -0.34
SGMS1-202ENST00000361781 TBC1D3KA0A087X1G2 549 aa12.91□□□□□ -0.34
SGMS1-202ENST00000361781 NPIPA5A0A0B4J1W7 369 aa12.91□□□□□ -0.34
SGMS1-202ENST00000361781 TBC1D3FA6NER0 549 aaPredicted RBP12.91□□□□□ -0.34
SGMS1-202ENST00000361781 A8MUA0 341 aa12.91□□□□□ -0.34
SGMS1-202ENST00000361781 TBC1D3LB9A6J9 549 aa12.91□□□□□ -0.34
SGMS1-202ENST00000361781 NPIPA7E9PJI5 369 aa12.91□□□□□ -0.34
SGMS1-202ENST00000361781 M0R233 179 aa12.91□□□□□ -0.34
SGMS1-202ENST00000361781 GATBO75879 557 aaKnown RBP12.91□□□□□ -0.34
SGMS1-202ENST00000361781 IFNA7P01567 189 aa12.91□□□□□ -0.34
SGMS1-202ENST00000361781 SOD2P04179 222 aa12.91□□□□□ -0.34
SGMS1-202ENST00000361781 HMGN1P05114 100 aa12.91□□□□□ -0.34
SGMS1-202ENST00000361781 TBC1D3HP0C7X1 549 aa12.91□□□□□ -0.34
SGMS1-202ENST00000361781 NPIPA8P0DM63 369 aa12.91□□□□□ -0.34
SGMS1-202ENST00000361781 ELAVL4P26378 380 aaKnown RBP12.91□□□□□ -0.34
SGMS1-202ENST00000361781 SOX18P35713 384 aa12.91□□□□□ -0.34
SGMS1-202ENST00000361781 WNT3P56703 355 aa12.91□□□□□ -0.34
SGMS1-202ENST00000361781 MGAT3Q09327 533 aa12.91□□□□□ -0.34
SGMS1-202ENST00000361781 MLLT11Q13015 90 aaPredicted RBP12.91□□□□□ -0.34
SGMS1-202ENST00000361781 TBC1D3GQ6DHY5 549 aa12.91□□□□□ -0.34
SGMS1-202ENST00000361781 TBC1D3CQ6IPX1 549 aa12.91□□□□□ -0.34
SGMS1-202ENST00000361781 GDPGP1Q6ZNW5 385 aa12.91□□□□□ -0.34
SGMS1-202ENST00000361781 TBC1D3Q8IZP1 549 aaPredicted RBP12.91□□□□□ -0.34
SGMS1-202ENST00000361781 FTMTQ8N4E7 242 aa12.91□□□□□ -0.34
SGMS1-202ENST00000361781 TRAM1L1Q8N609 369 aa12.91□□□□□ -0.34
SGMS1-202ENST00000361781 LMLNQ96KR4 655 aa12.91□□□□□ -0.34
SGMS1-202ENST00000361781 CD180Q99467 661 aa12.91□□□□□ -0.34
SGMS1-202ENST00000361781 DPH1Q9BZG8 443 aa12.91□□□□□ -0.34
SGMS1-202ENST00000361781 OR10A4Q9H209 315 aa12.91□□□□□ -0.34
SGMS1-202ENST00000361781 HCN3Q9P1Z3 774 aa12.91□□□□□ -0.34
SGMS1-202ENST00000361781 RBBP6Q7Z6E9 1792 aaKnown RBP12.91□□□□□ -0.34
SGMS1-202ENST00000361781 LY75O60449 1722 aa12.91□□□□□ -0.34
SGMS1-202ENST00000361781 B4DXG7 233 aa12.91□□□□□ -0.34
SGMS1-202ENST00000361781 POLR1CO15160 346 aaPredicted RBP12.91□□□□□ -0.34
SGMS1-202ENST00000361781 PRAMEF4O60810 478 aa12.91□□□□□ -0.34
SGMS1-202ENST00000361781 F11P03951 625 aa12.91□□□□□ -0.34
SGMS1-202ENST00000361781 OMPP47874 163 aa12.91□□□□□ -0.34
SGMS1-202ENST00000361781 DEFA5Q01523 94 aa12.91□□□□□ -0.34
SGMS1-202ENST00000361781 RHAGQ02094 409 aa12.91□□□□□ -0.34
SGMS1-202ENST00000361781 ATXN7L3Q14CW9 347 aaPredicted RBP12.91□□□□□ -0.34
SGMS1-202ENST00000361781 FCN2Q15485 313 aa12.91□□□□□ -0.34
SGMS1-202ENST00000361781 NDUFA9Q16795 377 aa12.91□□□□□ -0.34
SGMS1-202ENST00000361781 PRAMEF9Q5VWM5 478 aa12.91□□□□□ -0.34
SGMS1-202ENST00000361781 KHDRBS2Q5VWX1 349 aaKnown RBP12.91□□□□□ -0.34
SGMS1-202ENST00000361781 LINC00299Q6ZSB3 139 aa12.91□□□□□ -0.34
SGMS1-202ENST00000361781 OR4E2Q8NGC2 313 aa12.91□□□□□ -0.34
SGMS1-202ENST00000361781 OR52I1Q8NGK6 324 aa12.91□□□□□ -0.34
SGMS1-202ENST00000361781 CXorf40BQ96DE9 158 aa12.91□□□□□ -0.34
SGMS1-202ENST00000361781 SAMD11Q96NU1 681 aa12.91□□□□□ -0.34
SGMS1-202ENST00000361781 CAMK1GQ96NX5 476 aa12.91□□□□□ -0.34
SGMS1-202ENST00000361781 ERMAPQ96PL5 475 aaPredicted RBP12.91□□□□□ -0.34
SGMS1-202ENST00000361781 SGIP1Q9BQI5 828 aa12.91□□□□□ -0.34
SGMS1-202ENST00000361781 FBXL12Q9NXK8 326 aa12.91□□□□□ -0.34
SGMS1-202ENST00000361781 STOML2Q9UJZ1 356 aa12.91□□□□□ -0.34
SGMS1-202ENST00000361781 GNG8Q9UK08 70 aa12.91□□□□□ -0.34
SGMS1-202ENST00000361781 L7N2F9 121 aa12.9□□□□□ -0.34
SGMS1-202ENST00000361781 SLC9A3R1O14745 358 aaPredicted RBP12.9□□□□□ -0.34
SGMS1-202ENST00000361781 FMO6PO60774 539 aa12.9□□□□□ -0.34
SGMS1-202ENST00000361781 CSF3P09919 207 aa12.9□□□□□ -0.34
SGMS1-202ENST00000361781 GKN3PP0CG01 181 aa12.9□□□□□ -0.34
SGMS1-202ENST00000361781 ARSBP15848 533 aa12.9□□□□□ -0.34
SGMS1-202ENST00000361781 STARP49675 285 aa12.9□□□□□ -0.34
SGMS1-202ENST00000361781 TLE2Q04725 743 aa12.9□□□□□ -0.34
SGMS1-202ENST00000361781 SSX1Q16384 188 aa12.9□□□□□ -0.34
SGMS1-202ENST00000361781 ZNF805Q5CZA5 627 aa12.9□□□□□ -0.34
SGMS1-202ENST00000361781 FIGNL1Q6PIW4 674 aa12.9□□□□□ -0.34
SGMS1-202ENST00000361781 VRK2Q86Y07 508 aa12.9□□□□□ -0.34
SGMS1-202ENST00000361781 OR2T33Q8NG76 320 aa12.9□□□□□ -0.34
SGMS1-202ENST00000361781 UBTD2Q8WUN7 234 aa12.9□□□□□ -0.34
SGMS1-202ENST00000361781 LINC01599Q8WXQ3 324 aa12.9□□□□□ -0.34
SGMS1-202ENST00000361781 ZNF689Q96CS4 500 aaPredicted RBP12.9□□□□□ -0.34
SGMS1-202ENST00000361781 HYLS1Q96M11 299 aa12.9□□□□□ -0.34
SGMS1-202ENST00000361781 THAP7Q9BT49 309 aaPredicted RBP12.9□□□□□ -0.34
SGMS1-202ENST00000361781 RBCK1Q9BYM8 510 aa12.9□□□□□ -0.34
SGMS1-202ENST00000361781 BRF2Q9HAW0 419 aa12.9□□□□□ -0.34
SGMS1-202ENST00000361781 TMEM27Q9HBJ8 222 aa12.9□□□□□ -0.34
SGMS1-202ENST00000361781 OR1A2Q9Y585 309 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms