RNA–Protein interactions for RNA: ENST00000361246.6

CDC42BPB-201, Transcript of CDC42 binding protein kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPB, Length 6,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-201ENST00000361246 MAPKAP1Q9BPZ7 522 aa19.26■□□□□ 0.67
CDC42BPB-201ENST00000361246 DUSP23Q9BVJ7 150 aa19.26■□□□□ 0.67
CDC42BPB-201ENST00000361246 DNAJB11Q9UBS4 358 aa19.26■□□□□ 0.67
CDC42BPB-201ENST00000361246 THAP6Q8TBB0 222 aa19.26■□□□□ 0.67
CDC42BPB-201ENST00000361246 SCGB3A2Q96PL1 93 aa19.26■□□□□ 0.67
CDC42BPB-201ENST00000361246 OR6C70A6NIJ9 312 aa19.26■□□□□ 0.67
CDC42BPB-201ENST00000361246 FXYD4P59646 89 aa19.26■□□□□ 0.67
CDC42BPB-201ENST00000361246 SCD5Q86SK9 330 aa19.26■□□□□ 0.67
CDC42BPB-201ENST00000361246 ARL14Q8N4G2 192 aa19.26■□□□□ 0.67
CDC42BPB-201ENST00000361246 GJE1A6NN92 205 aa19.26■□□□□ 0.67
CDC42BPB-201ENST00000361246 IL32P24001 234 aa19.26■□□□□ 0.67
CDC42BPB-201ENST00000361246 SIRPAP78324 504 aa19.26■□□□□ 0.67
CDC42BPB-201ENST00000361246 ROR2Q01974 943 aaKnown RBP19.26■□□□□ 0.67
CDC42BPB-201ENST00000361246 PLBD1Q6P4A8 553 aa19.26■□□□□ 0.67
CDC42BPB-201ENST00000361246 TIMP2P16035 220 aa19.25■□□□□ 0.67
CDC42BPB-201ENST00000361246 HSD11B2P80365 405 aa19.25■□□□□ 0.67
CDC42BPB-201ENST00000361246 SERINC2Q96SA4 455 aa19.25■□□□□ 0.67
CDC42BPB-201ENST00000361246 NUDT15Q9NV35 164 aa19.25■□□□□ 0.67
CDC42BPB-201ENST00000361246 NUDT21O43809 227 aaKnown RBP19.25■□□□□ 0.67
CDC42BPB-201ENST00000361246 HOXC5Q00444 222 aa19.25■□□□□ 0.67
CDC42BPB-201ENST00000361246 RAB12Q6IQ22 244 aa19.25■□□□□ 0.67
CDC42BPB-201ENST00000361246 ZFAND4Q86XD8 727 aa19.25■□□□□ 0.67
CDC42BPB-201ENST00000361246 MDGA1Q8NFP4 955 aa19.25■□□□□ 0.67
CDC42BPB-201ENST00000361246 SLC6A18Q96N87 628 aa19.25■□□□□ 0.67
CDC42BPB-201ENST00000361246 SECISBP2Q96T21 854 aaKnown RBP19.25■□□□□ 0.67
CDC42BPB-201ENST00000361246 ZNF559Q9BR84 538 aa19.25■□□□□ 0.67
CDC42BPB-201ENST00000361246 MED16Q9Y2X0 877 aa19.25■□□□□ 0.67
CDC42BPB-201ENST00000361246 ETV5P41161 510 aa19.25■□□□□ 0.67
CDC42BPB-201ENST00000361246 KLF16Q9BXK1 252 aaPredicted RBP19.25■□□□□ 0.67
CDC42BPB-201ENST00000361246 DPH1Q9BZG8 443 aa19.25■□□□□ 0.67
CDC42BPB-201ENST00000361246 TMEM184CQ9NVA4 438 aa19.25■□□□□ 0.67
CDC42BPB-201ENST00000361246 BDH1Q02338 343 aa19.25■□□□□ 0.67
CDC42BPB-201ENST00000361246 PPP1R3BQ86XI6 285 aa19.25■□□□□ 0.67
CDC42BPB-201ENST00000361246 ZSWIM9Q86XI8 627 aa19.25■□□□□ 0.67
CDC42BPB-201ENST00000361246 OR9A4Q8NGU2 314 aa19.25■□□□□ 0.67
CDC42BPB-201ENST00000361246 TAS2R10Q9NYW0 307 aa19.25■□□□□ 0.67
CDC42BPB-201ENST00000361246 MGAT4BQ9UQ53 548 aa19.25■□□□□ 0.67
CDC42BPB-201ENST00000361246 GPR26Q8NDV2 337 aa19.25■□□□□ 0.67
CDC42BPB-201ENST00000361246 NANOS1Q8WY41 292 aaKnown RBP19.25■□□□□ 0.67
CDC42BPB-201ENST00000361246 NELL2Q99435 816 aa19.25■□□□□ 0.67
CDC42BPB-201ENST00000361246 HSD17B12Q53GQ0 312 aa19.24■□□□□ 0.67
CDC42BPB-201ENST00000361246 KIAA1614Q5VZ46 1190 aa19.24■□□□□ 0.67
CDC42BPB-201ENST00000361246 FAM230AA0A1W2PPH8 454 aa19.24■□□□□ 0.67
CDC42BPB-201ENST00000361246 TPPPO94811 219 aa19.24■□□□□ 0.67
CDC42BPB-201ENST00000361246 GJA4P35212 333 aa19.24■□□□□ 0.67
CDC42BPB-201ENST00000361246 LSSP48449 732 aa19.24■□□□□ 0.67
CDC42BPB-201ENST00000361246 COMMD6Q7Z4G1 85 aa19.24■□□□□ 0.67
CDC42BPB-201ENST00000361246 FCGR1BQ92637 280 aa19.24■□□□□ 0.67
CDC42BPB-201ENST00000361246 SLC41A3Q96GZ6 507 aa19.24■□□□□ 0.67
CDC42BPB-201ENST00000361246 MED11Q9P086 117 aa19.24■□□□□ 0.67
CDC42BPB-201ENST00000361246 ALG5Q9Y673 324 aa19.24■□□□□ 0.67
CDC42BPB-201ENST00000361246 LRP6O75581 1613 aa19.24■□□□□ 0.67
CDC42BPB-201ENST00000361246 SCRG1O75711 98 aa19.24■□□□□ 0.67
CDC42BPB-201ENST00000361246 EIF2B1Q14232 305 aaKnown RBP19.24■□□□□ 0.67
CDC42BPB-201ENST00000361246 GLT8D1Q68CQ7 371 aa19.24■□□□□ 0.67
CDC42BPB-201ENST00000361246 ENPP6Q6UWR7 440 aa19.24■□□□□ 0.67
CDC42BPB-201ENST00000361246 PHOSPHO2Q8TCD6 241 aa19.24■□□□□ 0.67
CDC42BPB-201ENST00000361246 FCAMRQ8WWV6 532 aa19.24■□□□□ 0.67
CDC42BPB-201ENST00000361246 MFRPQ9BY79 579 aa19.24■□□□□ 0.67
CDC42BPB-201ENST00000361246 R3HDMLQ9H3Y0 253 aa19.24■□□□□ 0.67
CDC42BPB-201ENST00000361246 PRSS21Q9Y6M0 314 aa19.24■□□□□ 0.67
CDC42BPB-201ENST00000361246 SULT2B1O00204 365 aa19.24■□□□□ 0.67
CDC42BPB-201ENST00000361246 HRH2P25021 359 aa19.24■□□□□ 0.67
CDC42BPB-201ENST00000361246 RBPJQ06330 500 aa19.24■□□□□ 0.67
CDC42BPB-201ENST00000361246 CFAP77Q6ZQR2 320 aa19.24■□□□□ 0.67
CDC42BPB-201ENST00000361246 SAMD12Q8N8I0 201 aa19.24■□□□□ 0.67
CDC42BPB-201ENST00000361246 CDS1Q92903 461 aa19.24■□□□□ 0.67
CDC42BPB-201ENST00000361246 ADOQ96SZ5 270 aa19.24■□□□□ 0.67
CDC42BPB-201ENST00000361246 POLE4Q9NR33 117 aa19.24■□□□□ 0.67
CDC42BPB-201ENST00000361246 EURLQ9NYK6 297 aa19.24■□□□□ 0.67
CDC42BPB-201ENST00000361246 CHD2O14647 1828 aaKnown RBP19.24■□□□□ 0.67
CDC42BPB-201ENST00000361246 CLCA1A8K7I4 914 aa19.24■□□□□ 0.67
CDC42BPB-201ENST00000361246 HSPB6O14558 160 aa19.24■□□□□ 0.67
CDC42BPB-201ENST00000361246 DOK2O60496 412 aa19.24■□□□□ 0.67
CDC42BPB-201ENST00000361246 EPOP01588 193 aa19.24■□□□□ 0.67
CDC42BPB-201ENST00000361246 KCTD18Q6PI47 426 aaPredicted RBP19.24■□□□□ 0.67
CDC42BPB-201ENST00000361246 MRPL21Q7Z2W9 205 aaKnown RBP19.24■□□□□ 0.67
CDC42BPB-201ENST00000361246 MRPL10Q7Z7H8 261 aaKnown RBP19.24■□□□□ 0.67
CDC42BPB-201ENST00000361246 SCML1Q9UN30 329 aa19.24■□□□□ 0.67
CDC42BPB-201ENST00000361246 ITGB7P26010 798 aa19.24■□□□□ 0.67
CDC42BPB-201ENST00000361246 FNTBP49356 437 aa19.24■□□□□ 0.67
CDC42BPB-201ENST00000361246 PCDHB16Q9NRJ7 776 aa19.24■□□□□ 0.67
CDC42BPB-201ENST00000361246 M0R3H8 397 aa19.23■□□□□ 0.67
CDC42BPB-201ENST00000361246 ARL6IP5O75915 188 aa19.23■□□□□ 0.67
CDC42BPB-201ENST00000361246 FGF3P11487 239 aaPredicted RBP19.23■□□□□ 0.67
CDC42BPB-201ENST00000361246 ATF6P18850 670 aa19.23■□□□□ 0.67
CDC42BPB-201ENST00000361246 HK3P52790 923 aa19.23■□□□□ 0.67
CDC42BPB-201ENST00000361246 FAM217AQ8IXS0 508 aa19.23■□□□□ 0.67
CDC42BPB-201ENST00000361246 MFSD8Q8NHS3 518 aa19.23■□□□□ 0.67
CDC42BPB-201ENST00000361246 GCDHQ92947 438 aaPredicted RBP19.23■□□□□ 0.67
CDC42BPB-201ENST00000361246 ECHDC3Q96DC8 303 aa19.23■□□□□ 0.67
CDC42BPB-201ENST00000361246 PPP1R14DQ9NXH3 145 aa19.23■□□□□ 0.67
CDC42BPB-201ENST00000361246 ACTR3BQ9P1U1 418 aa19.23■□□□□ 0.67
CDC42BPB-201ENST00000361246 SAGE2PA6NJ88 616 aa19.23■□□□□ 0.67
CDC42BPB-201ENST00000361246 AKR1C4P17516 323 aa19.23■□□□□ 0.67
CDC42BPB-201ENST00000361246 ENDOUP21128 410 aaKnown RBP19.23■□□□□ 0.67
CDC42BPB-201ENST00000361246 CTBSQ01459 385 aa19.23■□□□□ 0.67
CDC42BPB-201ENST00000361246 TCEAL8Q8IYN2 117 aa19.23■□□□□ 0.67
CDC42BPB-201ENST00000361246 OR5J2Q8NH18 312 aa19.23■□□□□ 0.67
CDC42BPB-201ENST00000361246 MYH4Q9Y623 1939 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms