RNA–Protein interactions for RNA: ENST00000360642.7

CLCN3-202, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2 BASIC

Gene CLCN3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-202ENST00000360642 NFE2L1Q14494 772 aa6.9□□□□□ -1.31
CLCN3-202ENST00000360642 DGUOKQ16854 277 aa6.9□□□□□ -1.31
CLCN3-202ENST00000360642 ZNF630Q2M218 657 aaPredicted RBP6.9□□□□□ -1.31
CLCN3-202ENST00000360642 HNRNPA1L2Q32P51 320 aaKnown RBP6.9□□□□□ -1.31
CLCN3-202ENST00000360642 TMEM52BQ4KMG9 183 aa6.9□□□□□ -1.31
CLCN3-202ENST00000360642 RAET1GQ6H3X3 334 aa6.9□□□□□ -1.31
CLCN3-202ENST00000360642 LCTLQ6UWM7 567 aa6.9□□□□□ -1.31
CLCN3-202ENST00000360642 FAM83HQ6ZRV2 1179 aaPredicted RBP6.9□□□□□ -1.31
CLCN3-202ENST00000360642 AHSA2Q719I0 299 aa6.9□□□□□ -1.31
CLCN3-202ENST00000360642 S100ZQ8WXG8 99 aa6.9□□□□□ -1.31
CLCN3-202ENST00000360642 ING5Q8WYH8 240 aa6.9□□□□□ -1.31
CLCN3-202ENST00000360642 LGALS12Q96DT0 336 aa6.9□□□□□ -1.31
CLCN3-202ENST00000360642 ZNF717Q9BY31 904 aaPredicted RBP6.9□□□□□ -1.31
CLCN3-202ENST00000360642 SLIRPQ9GZT3 109 aaKnown RBP6.9□□□□□ -1.31
CLCN3-202ENST00000360642 HMG20AQ9NP66 347 aa6.9□□□□□ -1.31
CLCN3-202ENST00000360642 ACER3Q9NUN7 267 aa6.9□□□□□ -1.31
CLCN3-202ENST00000360642 TAAR2Q9P1P5 351 aa6.9□□□□□ -1.31
CLCN3-202ENST00000360642 OSGIN1Q9UJX0 560 aa6.9□□□□□ -1.31
CLCN3-202ENST00000360642 POFUT2Q9Y2G5 429 aa6.9□□□□□ -1.31
CLCN3-202ENST00000360642 SPTBN5Q9NRC6 3674 aaKnown RBP6.9□□□□□ -1.31
CLCN3-202ENST00000360642 PRAMEF33A0A0G2JMD5 474 aa6.89□□□□□ -1.31
CLCN3-202ENST00000360642 A0A1W2PRB8 838 aa6.89□□□□□ -1.31
CLCN3-202ENST00000360642 M0R3G1 203 aa6.89□□□□□ -1.31
CLCN3-202ENST00000360642 VEGFDO43915 354 aa6.89□□□□□ -1.31
CLCN3-202ENST00000360642 PRAMEF10O60809 474 aa6.89□□□□□ -1.31
CLCN3-202ENST00000360642 HNRNPCP07910 306 aaKnown RBP eCLIP6.89□□□□□ -1.31
CLCN3-202ENST00000360642 IL3P08700 152 aa6.89□□□□□ -1.31
CLCN3-202ENST00000360642 ERGP11308 486 aa6.89□□□□□ -1.31
CLCN3-202ENST00000360642 ADRB3P13945 408 aa6.89□□□□□ -1.31
CLCN3-202ENST00000360642 ITGA2P17301 1181 aa6.89□□□□□ -1.31
CLCN3-202ENST00000360642 C21orf33P30042 268 aaPredicted RBP6.89□□□□□ -1.31
CLCN3-202ENST00000360642 CASRP41180 1078 aa6.89□□□□□ -1.31
CLCN3-202ENST00000360642 CAMK1Q14012 370 aa6.89□□□□□ -1.31
CLCN3-202ENST00000360642 OXA1LQ15070 435 aa6.89□□□□□ -1.31
CLCN3-202ENST00000360642 TBCEQ15813 527 aaPredicted RBP6.89□□□□□ -1.31
CLCN3-202ENST00000360642 EXOC3L2Q2M3D2 409 aa6.89□□□□□ -1.31
CLCN3-202ENST00000360642 ANGPTL8Q6UXH0 198 aa6.89□□□□□ -1.31
CLCN3-202ENST00000360642 TMIGD1Q6UXZ0 262 aa6.89□□□□□ -1.31
CLCN3-202ENST00000360642 TRMT11Q7Z4G4 463 aaKnown RBP6.89□□□□□ -1.31
CLCN3-202ENST00000360642 SLC9B2Q86UD5 537 aa6.89□□□□□ -1.31
CLCN3-202ENST00000360642 DNAJC22Q8N4W6 341 aa6.89□□□□□ -1.31
CLCN3-202ENST00000360642 TMCO5AQ8N6Q1 288 aa6.89□□□□□ -1.31
CLCN3-202ENST00000360642 OR6Q1Q8NGQ2 317 aa6.89□□□□□ -1.31
CLCN3-202ENST00000360642 FCGR1BQ92637 280 aa6.89□□□□□ -1.31
CLCN3-202ENST00000360642 GGHQ92820 318 aa6.89□□□□□ -1.31
CLCN3-202ENST00000360642 UBE2E3Q969T4 207 aa6.89□□□□□ -1.31
CLCN3-202ENST00000360642 ZNF707Q96C28 371 aaPredicted RBP6.89□□□□□ -1.31
CLCN3-202ENST00000360642 COPS4Q9BT78 406 aa6.89□□□□□ -1.31
CLCN3-202ENST00000360642 ITPAQ9BY32 194 aa6.89□□□□□ -1.31
CLCN3-202ENST00000360642 MROQ9BYG7 248 aa6.89□□□□□ -1.31
CLCN3-202ENST00000360642 ZNF226Q9NYT6 803 aa6.89□□□□□ -1.31
CLCN3-202ENST00000360642 CLCA1A8K7I4 914 aa6.89□□□□□ -1.31
CLCN3-202ENST00000360642 J3KTA2 159 aa6.89□□□□□ -1.31
CLCN3-202ENST00000360642 M0QYG6 137 aa6.89□□□□□ -1.31
CLCN3-202ENST00000360642 PLK4O00444 970 aa6.89□□□□□ -1.31
CLCN3-202ENST00000360642 TOR1BO14657 336 aa6.89□□□□□ -1.31
CLCN3-202ENST00000360642 NADKO95544 446 aaPredicted RBP6.89□□□□□ -1.31
CLCN3-202ENST00000360642 KRT75O95678 551 aa6.89□□□□□ -1.31
CLCN3-202ENST00000360642 CDK1P06493 297 aa6.89□□□□□ -1.31
CLCN3-202ENST00000360642 CD36P16671 472 aa6.89□□□□□ -1.31
CLCN3-202ENST00000360642 NTSR1P30989 418 aa6.89□□□□□ -1.31
CLCN3-202ENST00000360642 LIPAP38571 399 aa6.89□□□□□ -1.31
CLCN3-202ENST00000360642 LIMK1P53667 647 aa6.89□□□□□ -1.31
CLCN3-202ENST00000360642 CDH12P55289 794 aa6.89□□□□□ -1.31
CLCN3-202ENST00000360642 LSM3P62310 102 aaKnown RBP6.89□□□□□ -1.31
CLCN3-202ENST00000360642 IFITM3Q01628 133 aa6.89□□□□□ -1.31
CLCN3-202ENST00000360642 SPIBQ01892 262 aa6.89□□□□□ -1.31
CLCN3-202ENST00000360642 TSTA3Q13630 321 aaPredicted RBP6.89□□□□□ -1.31
CLCN3-202ENST00000360642 NIPAL1Q6NVV3 410 aa6.89□□□□□ -1.31
CLCN3-202ENST00000360642 SLC22A25Q6T423 547 aa6.89□□□□□ -1.31
CLCN3-202ENST00000360642 ERN2Q76MJ5 926 aaKnown RBP6.89□□□□□ -1.31
CLCN3-202ENST00000360642 ARMC8Q8IUR7 673 aa6.89□□□□□ -1.31
CLCN3-202ENST00000360642 P3H2Q8IVL5 708 aa6.89□□□□□ -1.31
CLCN3-202ENST00000360642 MMP21Q8N119 569 aa6.89□□□□□ -1.31
CLCN3-202ENST00000360642 DENND6BQ8NEG7 585 aa6.89□□□□□ -1.31
CLCN3-202ENST00000360642 OR52J3Q8NH60 311 aa6.89□□□□□ -1.31
CLCN3-202ENST00000360642 OR5AK3PQ8NH89 298 aa6.89□□□□□ -1.31
CLCN3-202ENST00000360642 APOBEC4Q8WW27 367 aaKnown RBP6.89□□□□□ -1.31
CLCN3-202ENST00000360642 GEMIN6Q8WXD5 167 aaKnown RBP6.89□□□□□ -1.31
CLCN3-202ENST00000360642 RPL3LQ92901 407 aaKnown RBP6.89□□□□□ -1.31
CLCN3-202ENST00000360642 SLC38A4Q969I6 547 aa6.89□□□□□ -1.31
CLCN3-202ENST00000360642 COX14Q96I36 57 aa6.89□□□□□ -1.31
CLCN3-202ENST00000360642 PAWRQ96IZ0 340 aaKnown RBP6.89□□□□□ -1.31
CLCN3-202ENST00000360642 WDR92Q96MX6 357 aa6.89□□□□□ -1.31
CLCN3-202ENST00000360642 DACH2Q96NX9 599 aa6.89□□□□□ -1.31
CLCN3-202ENST00000360642 RAD9AQ99638 391 aa6.89□□□□□ -1.31
CLCN3-202ENST00000360642 PIP5K1AQ99755 562 aa6.89□□□□□ -1.31
CLCN3-202ENST00000360642 RHBGQ9H310 441 aa6.89□□□□□ -1.31
CLCN3-202ENST00000360642 C11orf49Q9H6J7 331 aa6.89□□□□□ -1.31
CLCN3-202ENST00000360642 SPASTQ9UBP0 616 aa6.89□□□□□ -1.31
CLCN3-202ENST00000360642 CFAP20Q9Y6A4 193 aaKnown RBP6.89□□□□□ -1.31
CLCN3-202ENST00000360642 EDDM13A0A1B0GTR0 161 aa6.89□□□□□ -1.31
CLCN3-202ENST00000360642 ARRDC5A6NEK1 342 aa6.89□□□□□ -1.31
CLCN3-202ENST00000360642 OTOL1A6NHN0 477 aaPredicted RBP6.89□□□□□ -1.31
CLCN3-202ENST00000360642 PRR19A6NJB7 356 aa6.89□□□□□ -1.31
CLCN3-202ENST00000360642 PCDH17O14917 1159 aa6.89□□□□□ -1.31
CLCN3-202ENST00000360642 TBX19O60806 448 aa6.89□□□□□ -1.31
CLCN3-202ENST00000360642 UQCRC2P22695 453 aa6.89□□□□□ -1.31
CLCN3-202ENST00000360642 ALDH4A1P30038 563 aa6.89□□□□□ -1.31
CLCN3-202ENST00000360642 CHI3L1P36222 383 aaPredicted RBP6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms