RNA–Protein interactions for RNA: ENST00000359895.6

PDLIM7-203, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-203ENST00000359895 PTCHD4Q6ZW05 846 aa17.15■□□□□ 0.34
PDLIM7-203ENST00000359895 COMTD1Q86VU5 262 aa17.15■□□□□ 0.34
PDLIM7-203ENST00000359895 CROCCP3Q8IVE0 287 aa17.15■□□□□ 0.34
PDLIM7-203ENST00000359895 ZNF687Q8N1G0 1237 aa17.15■□□□□ 0.34
PDLIM7-203ENST00000359895 SLC7A13Q8TCU3 470 aa17.15■□□□□ 0.34
PDLIM7-203ENST00000359895 SLC6A18Q96N87 628 aa17.15■□□□□ 0.34
PDLIM7-203ENST00000359895 WFDC6Q9BQY6 131 aa17.15■□□□□ 0.34
PDLIM7-203ENST00000359895 NECTIN3Q9NQS3 549 aa17.15■□□□□ 0.34
PDLIM7-203ENST00000359895 CNOT2Q9NZN8 540 aaKnown RBP17.15■□□□□ 0.34
PDLIM7-203ENST00000359895 MRPS17Q9Y2R5 130 aaKnown RBP17.15■□□□□ 0.34
PDLIM7-203ENST00000359895 IFT52Q9Y366 437 aa17.15■□□□□ 0.34
PDLIM7-203ENST00000359895 HEMK1Q9Y5R4 338 aaPredicted RBP17.15■□□□□ 0.34
PDLIM7-203ENST00000359895 SCN2AQ99250 2005 aa17.14■□□□□ 0.33
PDLIM7-203ENST00000359895 A0A087WV62 115 aa17.14■□□□□ 0.33
PDLIM7-203ENST00000359895 FAM227AF5H4B4 570 aa17.14■□□□□ 0.33
PDLIM7-203ENST00000359895 TLR4O00206 839 aa17.14■□□□□ 0.33
PDLIM7-203ENST00000359895 GALR3O60755 368 aaPredicted RBP17.14■□□□□ 0.33
PDLIM7-203ENST00000359895 ZNF182P17025 639 aaPredicted RBP17.14■□□□□ 0.33
PDLIM7-203ENST00000359895 GSTM3P21266 225 aa17.14■□□□□ 0.33
PDLIM7-203ENST00000359895 POU1F1P28069 291 aa17.14■□□□□ 0.33
PDLIM7-203ENST00000359895 CNR2P34972 360 aa17.14■□□□□ 0.33
PDLIM7-203ENST00000359895 SNRPGP62308 76 aaKnown RBP17.14■□□□□ 0.33
PDLIM7-203ENST00000359895 SNRPNP63162 240 aaKnown RBP17.14■□□□□ 0.33
PDLIM7-203ENST00000359895 FOXD4Q12950 439 aaPredicted RBP17.14■□□□□ 0.33
PDLIM7-203ENST00000359895 TARDBPQ13148 414 aaKnown RBP eCLIP17.14■□□□□ 0.33
PDLIM7-203ENST00000359895 C1orf61Q13536 156 aa17.14■□□□□ 0.33
PDLIM7-203ENST00000359895 CTF1Q16619 201 aa17.14■□□□□ 0.33
PDLIM7-203ENST00000359895 ARHGAP11BQ3KRB8 267 aa17.14■□□□□ 0.33
PDLIM7-203ENST00000359895 ZNF628Q5EBL2 1059 aa17.14■□□□□ 0.33
PDLIM7-203ENST00000359895 FAM111BQ6SJ93 734 aa17.14■□□□□ 0.33
PDLIM7-203ENST00000359895 OLIG3Q7RTU3 272 aa17.14■□□□□ 0.33
PDLIM7-203ENST00000359895 P2RY8Q86VZ1 359 aa17.14■□□□□ 0.33
PDLIM7-203ENST00000359895 C9orf43Q8TAL5 461 aaPredicted RBP17.14■□□□□ 0.33
PDLIM7-203ENST00000359895 TRUB1Q8WWH5 349 aaKnown RBP17.14■□□□□ 0.33
PDLIM7-203ENST00000359895 Q96MT0 163 aa17.14■□□□□ 0.33
PDLIM7-203ENST00000359895 LRRC61Q9BV99 259 aa17.14■□□□□ 0.33
PDLIM7-203ENST00000359895 PCED1AQ9H1Q7 454 aa17.14■□□□□ 0.33
PDLIM7-203ENST00000359895 CHRDQ9H2X0 955 aa17.14■□□□□ 0.33
PDLIM7-203ENST00000359895 ANKRD19PQ9H560 264 aa17.14■□□□□ 0.33
PDLIM7-203ENST00000359895 MTHFD2LQ9H903 347 aaPredicted RBP17.14■□□□□ 0.33
PDLIM7-203ENST00000359895 IL21RQ9HBE5 538 aa17.14■□□□□ 0.33
PDLIM7-203ENST00000359895 PRDM6Q9NQX0 595 aa17.14■□□□□ 0.33
PDLIM7-203ENST00000359895 C19orf53Q9UNZ5 99 aaPredicted RBP17.14■□□□□ 0.33
PDLIM7-203ENST00000359895 MRPS2Q9Y399 296 aaKnown RBP17.14■□□□□ 0.33
PDLIM7-203ENST00000359895 TMX2-CTNND1H3BSU7 103 aa17.13■□□□□ 0.33
PDLIM7-203ENST00000359895 GPR75O95800 540 aa17.13■□□□□ 0.33
PDLIM7-203ENST00000359895 ATP1B1P05026 303 aa17.13■□□□□ 0.33
PDLIM7-203ENST00000359895 CD27P26842 260 aa17.13■□□□□ 0.33
PDLIM7-203ENST00000359895 IFNGR2P38484 337 aa17.13■□□□□ 0.33
PDLIM7-203ENST00000359895 OLR1P78380 273 aa17.13■□□□□ 0.33
PDLIM7-203ENST00000359895 ELOCQ15369 112 aa17.13■□□□□ 0.33
PDLIM7-203ENST00000359895 ZCCHC12Q6PEW1 402 aa17.13■□□□□ 0.33
PDLIM7-203ENST00000359895 SFTPA2Q8IWL1 248 aa17.13■□□□□ 0.33
PDLIM7-203ENST00000359895 CA13Q8N1Q1 262 aa17.13■□□□□ 0.33
PDLIM7-203ENST00000359895 STX19Q8N4C7 294 aa17.13■□□□□ 0.33
PDLIM7-203ENST00000359895 FRMD1Q8N878 549 aa17.13■□□□□ 0.33
PDLIM7-203ENST00000359895 TBC1D15Q8TC07 691 aa17.13■□□□□ 0.33
PDLIM7-203ENST00000359895 SLC38A4Q969I6 547 aa17.13■□□□□ 0.33
PDLIM7-203ENST00000359895 CRELD1Q96HD1 420 aa17.13■□□□□ 0.33
PDLIM7-203ENST00000359895 ITPAQ9BY32 194 aa17.13■□□□□ 0.33
PDLIM7-203ENST00000359895 ANKRA2Q9H9E1 313 aa17.13■□□□□ 0.33
PDLIM7-203ENST00000359895 MAN2C1Q9NTJ4 1040 aa17.13■□□□□ 0.33
PDLIM7-203ENST00000359895 ZNF232Q9UNY5 417 aa17.13■□□□□ 0.33
PDLIM7-203ENST00000359895 ZNF860A6NHJ4 632 aa17.12■□□□□ 0.33
PDLIM7-203ENST00000359895 B4DGG1 531 aa17.12■□□□□ 0.33
PDLIM7-203ENST00000359895 CYR61O00622 381 aa17.12■□□□□ 0.33
PDLIM7-203ENST00000359895 RAB38P57729 211 aa17.12■□□□□ 0.33
PDLIM7-203ENST00000359895 VSX2P58304 361 aaPredicted RBP17.12■□□□□ 0.33
PDLIM7-203ENST00000359895 TAS2R41P59536 307 aa17.12■□□□□ 0.33
PDLIM7-203ENST00000359895 TRAM2Q15035 370 aa17.12■□□□□ 0.33
PDLIM7-203ENST00000359895 SMAD2Q15796 467 aaKnown RBP17.12■□□□□ 0.33
PDLIM7-203ENST00000359895 MOGQ16653 247 aa17.12■□□□□ 0.33
PDLIM7-203ENST00000359895 INAVAQ3KP66 663 aa17.12■□□□□ 0.33
PDLIM7-203ENST00000359895 FHL5Q5TD97 284 aa17.12■□□□□ 0.33
PDLIM7-203ENST00000359895 TMEM236Q5W0B7 351 aa17.12■□□□□ 0.33
PDLIM7-203ENST00000359895 C12orf73Q69YU5 71 aa17.12■□□□□ 0.33
PDLIM7-203ENST00000359895 C1orf94Q6P1W5 598 aa17.12■□□□□ 0.33
PDLIM7-203ENST00000359895 CASP12Q6UXS9 341 aa17.12■□□□□ 0.33
PDLIM7-203ENST00000359895 IQCHQ86VS3 1027 aa17.12■□□□□ 0.33
PDLIM7-203ENST00000359895 GKN2Q86XP6 184 aa17.12■□□□□ 0.33
PDLIM7-203ENST00000359895 OR4N5Q8IXE1 308 aa17.12■□□□□ 0.33
PDLIM7-203ENST00000359895 SLC16A11Q8NCK7 471 aa17.12■□□□□ 0.33
PDLIM7-203ENST00000359895 OR4K5Q8NGD3 323 aa17.12■□□□□ 0.33
PDLIM7-203ENST00000359895 OR52P1PQ8NH57 321 aa17.12■□□□□ 0.33
PDLIM7-203ENST00000359895 RLN3Q8WXF3 142 aa17.12■□□□□ 0.33
PDLIM7-203ENST00000359895 SLC9A6Q92581 669 aa17.12■□□□□ 0.33
PDLIM7-203ENST00000359895 CDS1Q92903 461 aa17.12■□□□□ 0.33
PDLIM7-203ENST00000359895 TPSD1Q9BZJ3 242 aa17.12■□□□□ 0.33
PDLIM7-203ENST00000359895 PIGUQ9H490 435 aa17.12■□□□□ 0.33
PDLIM7-203ENST00000359895 UCK1Q9HA47 277 aa17.12■□□□□ 0.33
PDLIM7-203ENST00000359895 CA14Q9ULX7 337 aa17.12■□□□□ 0.33
PDLIM7-203ENST00000359895 CLDN24A6NM45 220 aa17.11■□□□□ 0.33
PDLIM7-203ENST00000359895 METTL12A8MUP2 240 aa17.11■□□□□ 0.33
PDLIM7-203ENST00000359895 H3BN98 237 aa17.11■□□□□ 0.33
PDLIM7-203ENST00000359895 MAN1A2O60476 641 aa17.11■□□□□ 0.33
PDLIM7-203ENST00000359895 PLOD3O60568 738 aa17.11■□□□□ 0.33
PDLIM7-203ENST00000359895 DNAJB6O75190 326 aa17.11■□□□□ 0.33
PDLIM7-203ENST00000359895 CLPXO76031 633 aa17.11■□□□□ 0.33
PDLIM7-203ENST00000359895 CSF2P04141 144 aa17.11■□□□□ 0.33
PDLIM7-203ENST00000359895 PIPP12273 146 aaPredicted RBP17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms