RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 YIPF4Q9BSR8 244 aa12.93□□□□□ -0.34
PDLIM5-203ENST00000359265 CHID1Q9BWS9 393 aa12.93□□□□□ -0.34
PDLIM5-203ENST00000359265 ADAP2Q9NPF8 381 aa12.93□□□□□ -0.34
PDLIM5-203ENST00000359265 AGPAT4Q9NRZ5 378 aa12.93□□□□□ -0.34
PDLIM5-203ENST00000359265 EXD2Q9NVH0 621 aa12.93□□□□□ -0.34
PDLIM5-203ENST00000359265 OCIAD1Q9NX40 245 aa12.93□□□□□ -0.34
PDLIM5-203ENST00000359265 TOR4AQ9NXH8 423 aa12.93□□□□□ -0.34
PDLIM5-203ENST00000359265 CALML5Q9NZT1 146 aa12.93□□□□□ -0.34
PDLIM5-203ENST00000359265 KIF26BQ2KJY2 2108 aa12.92□□□□□ -0.34
PDLIM5-203ENST00000359265 B4E171 279 aa12.92□□□□□ -0.34
PDLIM5-203ENST00000359265 POLR1CO15160 346 aaPredicted RBP12.92□□□□□ -0.34
PDLIM5-203ENST00000359265 SUV39H1O43463 412 aa12.92□□□□□ -0.34
PDLIM5-203ENST00000359265 CPNE3O75131 537 aaKnown RBP12.92□□□□□ -0.34
PDLIM5-203ENST00000359265 DEAF1O75398 565 aaPredicted RBP12.92□□□□□ -0.34
PDLIM5-203ENST00000359265 JRKO75564 520 aa12.92□□□□□ -0.34
PDLIM5-203ENST00000359265 TIAF1O95411 115 aa12.92□□□□□ -0.34
PDLIM5-203ENST00000359265 LDLRP01130 860 aa12.92□□□□□ -0.34
PDLIM5-203ENST00000359265 IFNA16P05015 189 aa12.92□□□□□ -0.34
PDLIM5-203ENST00000359265 CT62P0C5K7 136 aa12.92□□□□□ -0.34
PDLIM5-203ENST00000359265 MAOAP21397 527 aa12.92□□□□□ -0.34
PDLIM5-203ENST00000359265 PEX2P28328 305 aa12.92□□□□□ -0.34
PDLIM5-203ENST00000359265 TSPAN7P41732 249 aa12.92□□□□□ -0.34
PDLIM5-203ENST00000359265 CRISP3P54108 245 aa12.92□□□□□ -0.34
PDLIM5-203ENST00000359265 RAB15P59190 212 aa12.92□□□□□ -0.34
PDLIM5-203ENST00000359265 MC2RQ01718 297 aa12.92□□□□□ -0.34
PDLIM5-203ENST00000359265 MGAT2Q10469 447 aa12.92□□□□□ -0.34
PDLIM5-203ENST00000359265 EIF3IQ13347 325 aaKnown RBP12.92□□□□□ -0.34
PDLIM5-203ENST00000359265 ATP6AP1Q15904 470 aa12.92□□□□□ -0.34
PDLIM5-203ENST00000359265 GRAMD1BQ3KR37 738 aa12.92□□□□□ -0.34
PDLIM5-203ENST00000359265 MINDY4Q4G0A6 757 aa12.92□□□□□ -0.34
PDLIM5-203ENST00000359265 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.92□□□□□ -0.34
PDLIM5-203ENST00000359265 TRMT12Q53H54 448 aaKnown RBP12.92□□□□□ -0.34
PDLIM5-203ENST00000359265 CRB2Q5IJ48 1285 aa12.92□□□□□ -0.34
PDLIM5-203ENST00000359265 OGFRL1Q5TC84 451 aaPredicted RBP12.92□□□□□ -0.34
PDLIM5-203ENST00000359265 PRAMEF8Q5VWM4 474 aa12.92□□□□□ -0.34
PDLIM5-203ENST00000359265 PRAMEF7Q5VXH5 474 aa12.92□□□□□ -0.34
PDLIM5-203ENST00000359265 HMBOX1Q6NT76 420 aa12.92□□□□□ -0.34
PDLIM5-203ENST00000359265 PWWP2BQ6NUJ5 590 aa12.92□□□□□ -0.34
PDLIM5-203ENST00000359265 ZCCHC12Q6PEW1 402 aa12.92□□□□□ -0.34
PDLIM5-203ENST00000359265 C16orf62Q7Z3J2 963 aa12.92□□□□□ -0.34
PDLIM5-203ENST00000359265 BMPERQ8N8U9 685 aa12.92□□□□□ -0.34
PDLIM5-203ENST00000359265 BBS10Q8TAM1 723 aa12.92□□□□□ -0.34
PDLIM5-203ENST00000359265 FAM110BQ8TC76 370 aa12.92□□□□□ -0.34
PDLIM5-203ENST00000359265 RIT1Q92963 219 aa12.92□□□□□ -0.34
PDLIM5-203ENST00000359265 CTHRC1Q96CG8 243 aa12.92□□□□□ -0.34
PDLIM5-203ENST00000359265 C16orf58Q96GQ5 468 aa12.92□□□□□ -0.34
PDLIM5-203ENST00000359265 LIN37Q96GY3 246 aaPredicted RBP12.92□□□□□ -0.34
PDLIM5-203ENST00000359265 TPD52L3Q96J77 140 aa12.92□□□□□ -0.34
PDLIM5-203ENST00000359265 HSH2DQ96JZ2 352 aa12.92□□□□□ -0.34
PDLIM5-203ENST00000359265 PTCHD1Q96NR3 888 aa12.92□□□□□ -0.34
PDLIM5-203ENST00000359265 ANKRA2Q9H9E1 313 aa12.92□□□□□ -0.34
PDLIM5-203ENST00000359265 CXorf21Q9HAI6 301 aa12.92□□□□□ -0.34
PDLIM5-203ENST00000359265 NECTIN3Q9NQS3 549 aa12.92□□□□□ -0.34
PDLIM5-203ENST00000359265 FBXO8Q9NRD0 319 aa12.92□□□□□ -0.34
PDLIM5-203ENST00000359265 C14orf105Q9NVL8 296 aa12.92□□□□□ -0.34
PDLIM5-203ENST00000359265 LIPT1Q9Y234 373 aa12.92□□□□□ -0.34
PDLIM5-203ENST00000359265 CLDN16Q9Y5I7 305 aa12.92□□□□□ -0.34
PDLIM5-203ENST00000359265 PTPRBP23467 1997 aa12.92□□□□□ -0.34
PDLIM5-203ENST00000359265 CSO75390 466 aaKnown RBP12.91□□□□□ -0.34
PDLIM5-203ENST00000359265 DKK1O94907 266 aa12.91□□□□□ -0.34
PDLIM5-203ENST00000359265 MT-CO3P00414 261 aa12.91□□□□□ -0.34
PDLIM5-203ENST00000359265 OPN1SWP03999 348 aa12.91□□□□□ -0.34
PDLIM5-203ENST00000359265 ALOX5P09917 674 aa12.91□□□□□ -0.34
PDLIM5-203ENST00000359265 FTH1P19P0C7X4 201 aa12.91□□□□□ -0.34
PDLIM5-203ENST00000359265 SOX18P35713 384 aa12.91□□□□□ -0.34
PDLIM5-203ENST00000359265 MAN2A2P49641 1150 aa12.91□□□□□ -0.34
PDLIM5-203ENST00000359265 DCDP81605 110 aaKnown RBP12.91□□□□□ -0.34
PDLIM5-203ENST00000359265 HPCAP84074 193 aa12.91□□□□□ -0.34
PDLIM5-203ENST00000359265 ZNF155Q12901 538 aaPredicted RBP12.91□□□□□ -0.34
PDLIM5-203ENST00000359265 NKG7Q16617 165 aa12.91□□□□□ -0.34
PDLIM5-203ENST00000359265 ISXQ2M1V0 245 aa12.91□□□□□ -0.34
PDLIM5-203ENST00000359265 NKAIN1Q4KMZ8 207 aa12.91□□□□□ -0.34
PDLIM5-203ENST00000359265 RPS26P11Q5JNZ5 115 aaPredicted RBP12.91□□□□□ -0.34
PDLIM5-203ENST00000359265 HES3Q5TGS1 186 aa12.91□□□□□ -0.34
PDLIM5-203ENST00000359265 LPCAT4Q643R3 524 aa12.91□□□□□ -0.34
PDLIM5-203ENST00000359265 DHRS13Q6UX07 377 aa12.91□□□□□ -0.34
PDLIM5-203ENST00000359265 FKBP9P1Q75LS8 142 aa12.91□□□□□ -0.34
PDLIM5-203ENST00000359265 COX15Q7KZN9 410 aa12.91□□□□□ -0.34
PDLIM5-203ENST00000359265 AMIGO2Q86SJ2 522 aa12.91□□□□□ -0.34
PDLIM5-203ENST00000359265 KRT73Q86Y46 540 aa12.91□□□□□ -0.34
PDLIM5-203ENST00000359265 CDRT4Q8N9R6 151 aa12.91□□□□□ -0.34
PDLIM5-203ENST00000359265 TAMM41Q96BW9 452 aa12.91□□□□□ -0.34
PDLIM5-203ENST00000359265 OTUB1Q96FW1 271 aaPredicted RBP12.91□□□□□ -0.34
PDLIM5-203ENST00000359265 CENPNQ96H22 339 aaPredicted RBP12.91□□□□□ -0.34
PDLIM5-203ENST00000359265 ZNF607Q96SK3 696 aa12.91□□□□□ -0.34
PDLIM5-203ENST00000359265 BDH2Q9BUT1 245 aa12.91□□□□□ -0.34
PDLIM5-203ENST00000359265 KLHL4Q9C0H6 718 aa12.91□□□□□ -0.34
PDLIM5-203ENST00000359265 SEMA6AQ9H2E6 1030 aa12.91□□□□□ -0.34
PDLIM5-203ENST00000359265 VCXQ9H320 206 aa12.91□□□□□ -0.34
PDLIM5-203ENST00000359265 APMAPQ9HDC9 416 aa12.91□□□□□ -0.34
PDLIM5-203ENST00000359265 GIN1Q9NXP7 522 aa12.91□□□□□ -0.34
PDLIM5-203ENST00000359265 DTNAQ9Y4J8 743 aa12.91□□□□□ -0.34
PDLIM5-203ENST00000359265 USP9XQ93008 2570 aaPredicted RBP12.91□□□□□ -0.34
PDLIM5-203ENST00000359265 NINQ8N4C6 2090 aa12.9□□□□□ -0.34
PDLIM5-203ENST00000359265 IGLV3-12A0A075B6K2 115 aa12.9□□□□□ -0.34
PDLIM5-203ENST00000359265 CCDC187A0A096LP49 1063 aa12.9□□□□□ -0.34
PDLIM5-203ENST00000359265 IGKV3D-11A0A0A0MRZ8 115 aa12.9□□□□□ -0.34
PDLIM5-203ENST00000359265 M0QX08 132 aa12.9□□□□□ -0.34
PDLIM5-203ENST00000359265 DYRK3O43781 588 aa12.9□□□□□ -0.34
PDLIM5-203ENST00000359265 PEX1O43933 1283 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms