RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 BCHEP06276 602 aa5.79□□□□□ -1.48
VPS13B-203ENST00000358544 CD3GP09693 182 aa5.79□□□□□ -1.48
VPS13B-203ENST00000358544 RAB4AP20338 218 aa5.79□□□□□ -1.48
VPS13B-203ENST00000358544 PRKCZQ05513 592 aa5.79□□□□□ -1.48
VPS13B-203ENST00000358544 SIRPB2Q5JXA9 342 aa5.79□□□□□ -1.48
VPS13B-203ENST00000358544 PAQR8Q8TEZ7 354 aa5.79□□□□□ -1.48
VPS13B-203ENST00000358544 SPNS1Q9H2V7 528 aa5.79□□□□□ -1.48
VPS13B-203ENST00000358544 RNF19AQ9NV58 838 aa5.79□□□□□ -1.48
VPS13B-203ENST00000358544 WRAP73Q9P2S5 460 aaPredicted RBP5.79□□□□□ -1.48
VPS13B-203ENST00000358544 RASD1Q9Y272 281 aa5.79□□□□□ -1.48
VPS13B-203ENST00000358544 SMIM28A0A1B0GU29 152 aa5.79□□□□□ -1.48
VPS13B-203ENST00000358544 GRPRP30550 384 aa5.79□□□□□ -1.48
VPS13B-203ENST00000358544 PRKAR1BP31321 381 aa5.79□□□□□ -1.48
VPS13B-203ENST00000358544 SOX2P48431 317 aa5.79□□□□□ -1.48
VPS13B-203ENST00000358544 HCCSP53701 268 aa5.79□□□□□ -1.48
VPS13B-203ENST00000358544 HERV-K104P61576 105 aa5.79□□□□□ -1.48
VPS13B-203ENST00000358544 SGCGQ13326 291 aa5.79□□□□□ -1.48
VPS13B-203ENST00000358544 GPR33Q49SQ1 333 aa5.79□□□□□ -1.48
VPS13B-203ENST00000358544 RBM23Q86U06 439 aaKnown RBP5.79□□□□□ -1.48
VPS13B-203ENST00000358544 CMIPQ8IY22 773 aa5.79□□□□□ -1.48
VPS13B-203ENST00000358544 DPEP2Q9H4A9 486 aa5.79□□□□□ -1.48
VPS13B-203ENST00000358544 PLEKHA1Q9HB21 404 aa5.79□□□□□ -1.48
VPS13B-203ENST00000358544 SARDHQ9UL12 918 aa5.79□□□□□ -1.48
VPS13B-203ENST00000358544 SLC6A5Q9Y345 797 aa5.79□□□□□ -1.48
VPS13B-203ENST00000358544 A0A0A6YYH2 397 aa5.79□□□□□ -1.48
VPS13B-203ENST00000358544 A6NJ64 397 aa5.79□□□□□ -1.48
VPS13B-203ENST00000358544 HOXA2O43364 376 aa5.79□□□□□ -1.48
VPS13B-203ENST00000358544 KLK1P06870 262 aa5.79□□□□□ -1.48
VPS13B-203ENST00000358544 CLEC2LP0C7M8 214 aa5.79□□□□□ -1.48
VPS13B-203ENST00000358544 ADRB3P13945 408 aa5.79□□□□□ -1.48
VPS13B-203ENST00000358544 PTBP1P26599 531 aaKnown RBP eCLIP5.79□□□□□ -1.481e-6■■■■■ 36.5
VPS13B-203ENST00000358544 GNMTQ14749 295 aa5.79□□□□□ -1.48
VPS13B-203ENST00000358544 C1orf220Q5T0J3 134 aa5.79□□□□□ -1.48
VPS13B-203ENST00000358544 TANGO2Q6ICL3 276 aa5.79□□□□□ -1.48
VPS13B-203ENST00000358544 NRROSQ86YC3 692 aa5.79□□□□□ -1.48
VPS13B-203ENST00000358544 USB1Q9BQ65 265 aaKnown RBP5.79□□□□□ -1.48
VPS13B-203ENST00000358544 SORBS1Q9BX66 1292 aaKnown RBP5.79□□□□□ -1.48
VPS13B-203ENST00000358544 SLC6A20Q9NP91 592 aa5.79□□□□□ -1.48
VPS13B-203ENST00000358544 LRFN1Q9P244 771 aa5.79□□□□□ -1.48
VPS13B-203ENST00000358544 SPATA31A1Q5TZJ5 1347 aa5.79□□□□□ -1.48
VPS13B-203ENST00000358544 PCDH8O95206 1070 aa5.79□□□□□ -1.48
VPS13B-203ENST00000358544 EBLN1P0CF75 366 aa5.79□□□□□ -1.48
VPS13B-203ENST00000358544 CPZQ66K79 652 aa5.79□□□□□ -1.48
VPS13B-203ENST00000358544 TMCO2Q7Z6W1 182 aaPredicted RBP5.79□□□□□ -1.48
VPS13B-203ENST00000358544 NLRP8Q86W28 1048 aa5.79□□□□□ -1.48
VPS13B-203ENST00000358544 NXPE1Q8N323 547 aa5.79□□□□□ -1.48
VPS13B-203ENST00000358544 CPA6Q8N4T0 437 aa5.79□□□□□ -1.48
VPS13B-203ENST00000358544 ACBD7Q8N6N7 88 aa5.79□□□□□ -1.48
VPS13B-203ENST00000358544 CLDN22Q8N7P3 220 aa5.79□□□□□ -1.48
VPS13B-203ENST00000358544 ZNF251Q9BRH9 671 aa5.79□□□□□ -1.48
VPS13B-203ENST00000358544 SLC5A7Q9GZV3 580 aa5.79□□□□□ -1.48
VPS13B-203ENST00000358544 DIMT1Q9UNQ2 313 aaKnown RBP5.79□□□□□ -1.48
VPS13B-203ENST00000358544 ATG4BQ9Y4P1 393 aa5.79□□□□□ -1.48
VPS13B-203ENST00000358544 NCR1O76036 304 aa5.79□□□□□ -1.48
VPS13B-203ENST00000358544 GIPP09681 153 aaPredicted RBP5.79□□□□□ -1.48
VPS13B-203ENST00000358544 PSMB1P20618 241 aaKnown RBP5.79□□□□□ -1.48
VPS13B-203ENST00000358544 NME2P22392 152 aa5.79□□□□□ -1.48
VPS13B-203ENST00000358544 KIAA0141Q14154 515 aaPredicted RBP5.79□□□□□ -1.48
VPS13B-203ENST00000358544 TCEA2Q15560 299 aa5.79□□□□□ -1.48
VPS13B-203ENST00000358544 RNF212Q495C1 297 aa5.79□□□□□ -1.48
VPS13B-203ENST00000358544 RNASE10Q5GAN6 216 aaKnown RBP5.79□□□□□ -1.48
VPS13B-203ENST00000358544 SLC35F2Q8IXU6 374 aa5.79□□□□□ -1.48
VPS13B-203ENST00000358544 RAB8BQ92930 207 aa5.79□□□□□ -1.48
VPS13B-203ENST00000358544 SPATC1LQ9H0A9 340 aa5.79□□□□□ -1.48
VPS13B-203ENST00000358544 FBXL4Q9UKA2 621 aa5.79□□□□□ -1.48
VPS13B-203ENST00000358544 MED31Q9Y3C7 131 aa5.79□□□□□ -1.48
VPS13B-203ENST00000358544 HYKKA2RU49 373 aa5.78□□□□□ -1.48
VPS13B-203ENST00000358544 PDYNP01213 254 aa5.78□□□□□ -1.48
VPS13B-203ENST00000358544 ARHGAP1Q07960 439 aa5.78□□□□□ -1.48
VPS13B-203ENST00000358544 COL13A1Q5TAT6 717 aaPredicted RBP5.78□□□□□ -1.48
VPS13B-203ENST00000358544 FAM171A1Q5VUB5 890 aa5.78□□□□□ -1.48
VPS13B-203ENST00000358544 LAX1Q8IWV1 398 aa5.78□□□□□ -1.48
VPS13B-203ENST00000358544 YAF2Q8IY57 180 aa5.78□□□□□ -1.48
VPS13B-203ENST00000358544 LGALS14Q8TCE9 139 aa5.78□□□□□ -1.48
VPS13B-203ENST00000358544 DDOQ99489 341 aa5.78□□□□□ -1.48
VPS13B-203ENST00000358544 SRRQ9GZT4 340 aa5.78□□□□□ -1.48
VPS13B-203ENST00000358544 NEUROD4Q9HD90 331 aa5.78□□□□□ -1.48
VPS13B-203ENST00000358544 TMEM39AQ9NV64 488 aa5.78□□□□□ -1.48
VPS13B-203ENST00000358544 OSER1Q9NX31 292 aa5.78□□□□□ -1.48
VPS13B-203ENST00000358544 A6NIN4 97 aa5.78□□□□□ -1.48
VPS13B-203ENST00000358544 TO15178 435 aa5.78□□□□□ -1.48
VPS13B-203ENST00000358544 ACSM4P0C7M7 580 aa5.78□□□□□ -1.48
VPS13B-203ENST00000358544 SLC35G4P0C7Q5 338 aa5.78□□□□□ -1.48
VPS13B-203ENST00000358544 CKBP12277 381 aa5.78□□□□□ -1.48
VPS13B-203ENST00000358544 BDKRB1P46663 353 aa5.78□□□□□ -1.48
VPS13B-203ENST00000358544 RAB6CQ53S08 254 aa5.78□□□□□ -1.48
VPS13B-203ENST00000358544 CLEC9AQ6UXN8 241 aa5.78□□□□□ -1.48
VPS13B-203ENST00000358544 GAREM2Q75VX8 874 aa5.78□□□□□ -1.48
VPS13B-203ENST00000358544 PXKQ7Z7A4 578 aa5.78□□□□□ -1.48
VPS13B-203ENST00000358544 COPS5Q92905 334 aa5.78□□□□□ -1.48
VPS13B-203ENST00000358544 FOXRED1Q96CU9 486 aaPredicted RBP5.78□□□□□ -1.48
VPS13B-203ENST00000358544 RADILQ96JH8 1075 aa5.78□□□□□ -1.48
VPS13B-203ENST00000358544 SLC19A3Q9BZV2 496 aa5.78□□□□□ -1.48
VPS13B-203ENST00000358544 RAB6CQ9H0N0 254 aa5.78□□□□□ -1.48
VPS13B-203ENST00000358544 SCML2Q9UQR0 700 aa5.78□□□□□ -1.48
VPS13B-203ENST00000358544 PDZK1IP1Q13113 114 aa5.78□□□□□ -1.48
VPS13B-203ENST00000358544 NKPD1Q17RQ9 610 aa5.78□□□□□ -1.48
VPS13B-203ENST00000358544 PTCHD3Q3KNS1 767 aa5.78□□□□□ -1.48
VPS13B-203ENST00000358544 POM121L1PQ3SYA9 428 aa5.78□□□□□ -1.48
VPS13B-203ENST00000358544 LARP4Q71RC2 724 aaKnown RBP eCLIP5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms