RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 ANKFN1Q8N957 763 aa16.91■□□□□ 0.3
SMARCD3-202ENST00000356800 SLC47A1Q96FL8 570 aa16.91■□□□□ 0.3
SMARCD3-202ENST00000356800 SLC35A4Q96G79 324 aa16.91■□□□□ 0.3
SMARCD3-202ENST00000356800 SPSB2Q99619 263 aa16.91■□□□□ 0.3
SMARCD3-202ENST00000356800 DDA1Q9BW61 102 aa16.91■□□□□ 0.3
SMARCD3-202ENST00000356800 ERVK-19Q9WJR5 959 aa16.91■□□□□ 0.3
SMARCD3-202ENST00000356800 ANGPT4Q9Y264 503 aa16.91■□□□□ 0.3
SMARCD3-202ENST00000356800 C15orf41Q9Y2V0 281 aa16.91■□□□□ 0.3
SMARCD3-202ENST00000356800 PTPRBP23467 1997 aa16.9■□□□□ 0.3
SMARCD3-202ENST00000356800 C17orf105B2RV13 164 aa16.9■□□□□ 0.3
SMARCD3-202ENST00000356800 TMEM229AB2RXF0 380 aa16.9■□□□□ 0.3
SMARCD3-202ENST00000356800 IDSB3KWA1 339 aa16.9■□□□□ 0.3
SMARCD3-202ENST00000356800 C9orf172C9J069 976 aa16.9■□□□□ 0.3
SMARCD3-202ENST00000356800 ASNA1O43681 348 aa16.9■□□□□ 0.3
SMARCD3-202ENST00000356800 TPST1O60507 370 aa16.9■□□□□ 0.3
SMARCD3-202ENST00000356800 STK17BO94768 372 aa16.9■□□□□ 0.3
SMARCD3-202ENST00000356800 ALBP02768 609 aa16.9■□□□□ 0.3
SMARCD3-202ENST00000356800 MAP3K8P41279 467 aa16.9■□□□□ 0.3
SMARCD3-202ENST00000356800 EMDP50402 254 aa16.9■□□□□ 0.3
SMARCD3-202ENST00000356800 PGDP52209 483 aa16.9■□□□□ 0.3
SMARCD3-202ENST00000356800 ATP6AP1Q15904 470 aa16.9■□□□□ 0.3
SMARCD3-202ENST00000356800 DUSP5Q16690 384 aa16.9■□□□□ 0.3
SMARCD3-202ENST00000356800 LRRC36Q1X8D7 754 aa16.9■□□□□ 0.3
SMARCD3-202ENST00000356800 CRB2Q5IJ48 1285 aa16.9■□□□□ 0.3
SMARCD3-202ENST00000356800 RPS26P11Q5JNZ5 115 aaPredicted RBP16.9■□□□□ 0.3
SMARCD3-202ENST00000356800 REEP3Q6NUK4 255 aa16.9■□□□□ 0.3
SMARCD3-202ENST00000356800 OLIG3Q7RTU3 272 aa16.9■□□□□ 0.3
SMARCD3-202ENST00000356800 AMIGO2Q86SJ2 522 aa16.9■□□□□ 0.3
SMARCD3-202ENST00000356800 SLC44A2Q8IWA5 706 aaPredicted RBP16.9■□□□□ 0.3
SMARCD3-202ENST00000356800 OR10Q1Q8NGQ4 319 aa16.9■□□□□ 0.3
SMARCD3-202ENST00000356800 HOXB13Q92826 284 aaPredicted RBP16.9■□□□□ 0.3
SMARCD3-202ENST00000356800 MR1Q95460 341 aa16.9■□□□□ 0.3
SMARCD3-202ENST00000356800 CENPNQ96H22 339 aaPredicted RBP16.9■□□□□ 0.3
SMARCD3-202ENST00000356800 MESP1Q9BRJ9 268 aa16.9■□□□□ 0.3
SMARCD3-202ENST00000356800 ZPBPQ9BS86 351 aa16.9■□□□□ 0.3
SMARCD3-202ENST00000356800 CNPPD1Q9BV87 410 aa16.9■□□□□ 0.3
SMARCD3-202ENST00000356800 P2RX2Q9UBL9 471 aa16.9■□□□□ 0.3
SMARCD3-202ENST00000356800 KLK3P07288 261 aaPredicted RBP16.89■□□□□ 0.29
SMARCD3-202ENST00000356800 TNNI3P19429 210 aa16.89■□□□□ 0.29
SMARCD3-202ENST00000356800 EIF3IQ13347 325 aaKnown RBP16.89■□□□□ 0.29
SMARCD3-202ENST00000356800 ELAVL1Q15717 326 aaKnown RBP16.89■□□□□ 0.29
SMARCD3-202ENST00000356800 C3orf38Q5JPI3 329 aa16.89■□□□□ 0.29
SMARCD3-202ENST00000356800 FAAH2Q6GMR7 532 aa16.89■□□□□ 0.29
SMARCD3-202ENST00000356800 KBTBD2Q8IY47 623 aa16.89■□□□□ 0.29
SMARCD3-202ENST00000356800 ZNF321PQ8N8H1 164 aa16.89■□□□□ 0.29
SMARCD3-202ENST00000356800 ZNF615Q8N8J6 731 aa16.89■□□□□ 0.29
SMARCD3-202ENST00000356800 SLC9A6Q92581 669 aa16.89■□□□□ 0.29
SMARCD3-202ENST00000356800 CDS1Q92903 461 aa16.89■□□□□ 0.29
SMARCD3-202ENST00000356800 TAMM41Q96BW9 452 aa16.89■□□□□ 0.29
SMARCD3-202ENST00000356800 ZNF578Q96N58 590 aaPredicted RBP16.89■□□□□ 0.29
SMARCD3-202ENST00000356800 ZNF184Q99676 751 aaPredicted RBP16.89■□□□□ 0.29
SMARCD3-202ENST00000356800 SPRY4Q9C004 299 aa16.89■□□□□ 0.29
SMARCD3-202ENST00000356800 SEMA6AQ9H2E6 1030 aa16.89■□□□□ 0.29
SMARCD3-202ENST00000356800 RUBCNLQ9H714 662 aa16.89■□□□□ 0.29
SMARCD3-202ENST00000356800 ADPRHL2Q9NX46 363 aa16.89■□□□□ 0.29
SMARCD3-202ENST00000356800 SATB2Q9UPW6 733 aa16.89■□□□□ 0.29
SMARCD3-202ENST00000356800 PCDHGA3Q9Y5H0 932 aa16.89■□□□□ 0.29
SMARCD3-202ENST00000356800 SLC28A2O43868 658 aa16.88■□□□□ 0.29
SMARCD3-202ENST00000356800 PGM3O95394 542 aa16.88■□□□□ 0.29
SMARCD3-202ENST00000356800 ZNF682O95780 498 aa16.88■□□□□ 0.29
SMARCD3-202ENST00000356800 DDAH2O95865 285 aa16.88■□□□□ 0.29
SMARCD3-202ENST00000356800 LDLRP01130 860 aa16.88■□□□□ 0.29
SMARCD3-202ENST00000356800 IFNA14P01570 189 aa16.88■□□□□ 0.29
SMARCD3-202ENST00000356800 SEMG1P04279 462 aa16.88■□□□□ 0.29
SMARCD3-202ENST00000356800 HEXBP07686 556 aa16.88■□□□□ 0.29
SMARCD3-202ENST00000356800 CHRM4P08173 479 aa16.88■□□□□ 0.29
SMARCD3-202ENST00000356800 MAGEA2P43356 314 aa16.88■□□□□ 0.29
SMARCD3-202ENST00000356800 FAM69BQ5VUD6 431 aa16.88■□□□□ 0.29
SMARCD3-202ENST00000356800 PATL1Q86TB9 770 aaKnown RBP16.88■□□□□ 0.29
SMARCD3-202ENST00000356800 MARCH9Q86YJ5 346 aa16.88■□□□□ 0.29
SMARCD3-202ENST00000356800 CDRT4Q8N9R6 151 aa16.88■□□□□ 0.29
SMARCD3-202ENST00000356800 WDR36Q8NI36 951 aaKnown RBP16.88■□□□□ 0.29
SMARCD3-202ENST00000356800 ADAMTS15Q8TE58 950 aa16.88■□□□□ 0.29
SMARCD3-202ENST00000356800 DNAJC9Q8WXX5 260 aa16.88■□□□□ 0.29
SMARCD3-202ENST00000356800 SENP5Q96HI0 755 aaPredicted RBP16.88■□□□□ 0.29
SMARCD3-202ENST00000356800 CNOT11Q9UKZ1 510 aaKnown RBP16.88■□□□□ 0.29
SMARCD3-202ENST00000356800 DTX4Q9Y2E6 619 aa16.88■□□□□ 0.29
SMARCD3-202ENST00000356800 PCDHGA8Q9Y5G5 932 aa16.88■□□□□ 0.29
SMARCD3-202ENST00000356800 HEMK1Q9Y5R4 338 aaPredicted RBP16.88■□□□□ 0.29
SMARCD3-202ENST00000356800 CNOT1A5YKK6 2376 aaKnown RBP16.88■□□□□ 0.29
SMARCD3-202ENST00000356800 TMEM247A6NEH6 219 aa16.88■□□□□ 0.29
SMARCD3-202ENST00000356800 C5orf58C9J3I9 102 aa16.88■□□□□ 0.29
SMARCD3-202ENST00000356800 M0QX08 132 aa16.88■□□□□ 0.29
SMARCD3-202ENST00000356800 SUV39H1O43463 412 aa16.88■□□□□ 0.29
SMARCD3-202ENST00000356800 COQ9O75208 318 aa16.88■□□□□ 0.29
SMARCD3-202ENST00000356800 DEAF1O75398 565 aaPredicted RBP16.88■□□□□ 0.29
SMARCD3-202ENST00000356800 PRSS23O95084 383 aa16.88■□□□□ 0.29
SMARCD3-202ENST00000356800 SLC34A2O95436 690 aa16.88■□□□□ 0.29
SMARCD3-202ENST00000356800 DLGAP3O95886 979 aa16.88■□□□□ 0.29
SMARCD3-202ENST00000356800 NR2F1P10589 423 aa16.88■□□□□ 0.29
SMARCD3-202ENST00000356800 CLCN2P51788 898 aa16.88■□□□□ 0.29
SMARCD3-202ENST00000356800 SELENOWP63302 87 aa16.88■□□□□ 0.29
SMARCD3-202ENST00000356800 TARDBPQ13148 414 aaKnown RBP eCLIP16.88■□□□□ 0.29
SMARCD3-202ENST00000356800 GRAMD1BQ3KR37 738 aa16.88■□□□□ 0.29
SMARCD3-202ENST00000356800 CYBRD1Q53TN4 286 aa16.88■□□□□ 0.29
SMARCD3-202ENST00000356800 HEPHL1Q6MZM0 1159 aa16.88■□□□□ 0.29
SMARCD3-202ENST00000356800 ZCCHC12Q6PEW1 402 aa16.88■□□□□ 0.29
SMARCD3-202ENST00000356800 IZUMO2Q6UXV1 221 aa16.88■□□□□ 0.29
SMARCD3-202ENST00000356800 FKBP9P1Q75LS8 142 aa16.88■□□□□ 0.29
SMARCD3-202ENST00000356800 TIPARPQ7Z3E1 657 aaKnown RBP16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms