RNA–Protein interactions for RNA: ENST00000355947.6

TRIM4-203, Transcript of tripartite motif containing 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM4, Length 3,383 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-203ENST00000355947 ELFN1P0C7U0 828 aa12.84□□□□□ -0.35
TRIM4-203ENST00000355947 HMGA1P17096 107 aaKnown RBP12.84□□□□□ -0.35
TRIM4-203ENST00000355947 ATP12AP54707 1039 aa12.84□□□□□ -0.35
TRIM4-203ENST00000355947 SLC27A4Q6P1M0 643 aa12.84□□□□□ -0.35
TRIM4-203ENST00000355947 GDPGP1Q6ZNW5 385 aa12.84□□□□□ -0.35
TRIM4-203ENST00000355947 FTMTQ8N4E7 242 aa12.84□□□□□ -0.35
TRIM4-203ENST00000355947 KLF16Q9BXK1 252 aaPredicted RBP12.84□□□□□ -0.35
TRIM4-203ENST00000355947 SLC25A19Q9HC21 320 aa12.84□□□□□ -0.35
TRIM4-203ENST00000355947 DMRT3Q9NQL9 472 aa12.84□□□□□ -0.35
TRIM4-203ENST00000355947 SLC25A13Q9UJS0 675 aa12.84□□□□□ -0.35
TRIM4-203ENST00000355947 CDK2AP1O14519 115 aa12.84□□□□□ -0.35
TRIM4-203ENST00000355947 GNB5O14775 395 aa12.84□□□□□ -0.35
TRIM4-203ENST00000355947 SIGLEC5O15389 551 aa12.84□□□□□ -0.35
TRIM4-203ENST00000355947 LEFTY1O75610 366 aa12.84□□□□□ -0.35
TRIM4-203ENST00000355947 ZDHHC11BP0C7U3 371 aa12.84□□□□□ -0.35
TRIM4-203ENST00000355947 SOX9P48436 509 aa12.84□□□□□ -0.35
TRIM4-203ENST00000355947 SIGLEC14Q08ET2 396 aa12.84□□□□□ -0.35
TRIM4-203ENST00000355947 GRIN2CQ14957 1233 aa12.84□□□□□ -0.35
TRIM4-203ENST00000355947 LYPD4Q6UWN0 246 aa12.84□□□□□ -0.35
TRIM4-203ENST00000355947 SLCO4C1Q6ZQN7 724 aa12.84□□□□□ -0.35
TRIM4-203ENST00000355947 COMTD1Q86VU5 262 aa12.84□□□□□ -0.35
TRIM4-203ENST00000355947 TOMM5Q8N4H5 51 aa12.84□□□□□ -0.35
TRIM4-203ENST00000355947 ZNF433Q8N7K0 673 aaPredicted RBP12.84□□□□□ -0.35
TRIM4-203ENST00000355947 CYB561A3Q8NBI2 242 aa12.84□□□□□ -0.35
TRIM4-203ENST00000355947 OR13C5Q8NGS8 318 aa12.84□□□□□ -0.35
TRIM4-203ENST00000355947 COQ8AQ8NI60 647 aa12.84□□□□□ -0.35
TRIM4-203ENST00000355947 BTN2A2Q8WVV5 523 aa12.84□□□□□ -0.35
TRIM4-203ENST00000355947 ECHDC3Q96DC8 303 aa12.84□□□□□ -0.35
TRIM4-203ENST00000355947 C17orf62Q9BQA9 187 aa12.84□□□□□ -0.35
TRIM4-203ENST00000355947 CACNG6Q9BXT2 260 aa12.84□□□□□ -0.35
TRIM4-203ENST00000355947 TAS2R7Q9NYW3 318 aa12.84□□□□□ -0.35
TRIM4-203ENST00000355947 KLHL21Q9UJP4 597 aa12.84□□□□□ -0.35
TRIM4-203ENST00000355947 ATP6V1G2-DDX39BF2Z307 99 aa12.83□□□□□ -0.36
TRIM4-203ENST00000355947 GFYI3L273 518 aa12.83□□□□□ -0.36
TRIM4-203ENST00000355947 J3QLW9 94 aa12.83□□□□□ -0.36
TRIM4-203ENST00000355947 INPPL1O15357 1258 aa12.83□□□□□ -0.36
TRIM4-203ENST00000355947 LATO43561 262 aa12.83□□□□□ -0.36
TRIM4-203ENST00000355947 RGS11O94810 467 aa12.83□□□□□ -0.36
TRIM4-203ENST00000355947 HLA-DPB1P04440 258 aa12.83□□□□□ -0.36
TRIM4-203ENST00000355947 ZNF19P17023 458 aa12.83□□□□□ -0.36
TRIM4-203ENST00000355947 SNTA1Q13424 505 aa12.83□□□□□ -0.36
TRIM4-203ENST00000355947 BICRALQ6AI39 1079 aa12.83□□□□□ -0.36
TRIM4-203ENST00000355947 PLBD1Q6P4A8 553 aa12.83□□□□□ -0.36
TRIM4-203ENST00000355947 CPOQ8IVL8 374 aa12.83□□□□□ -0.36
TRIM4-203ENST00000355947 CCDC116Q8IYX3 515 aa12.83□□□□□ -0.36
TRIM4-203ENST00000355947 CLDN22Q8N7P3 220 aa12.83□□□□□ -0.36
TRIM4-203ENST00000355947 OR11H4Q8NGC9 324 aa12.83□□□□□ -0.36
TRIM4-203ENST00000355947 SLC35G5Q96KT7 338 aa12.83□□□□□ -0.36
TRIM4-203ENST00000355947 TMEM43Q9BTV4 400 aa12.83□□□□□ -0.36
TRIM4-203ENST00000355947 MS4A7Q9GZW8 240 aaPredicted RBP12.83□□□□□ -0.36
TRIM4-203ENST00000355947 ZNF334Q9HCZ1 680 aaPredicted RBP12.83□□□□□ -0.36
TRIM4-203ENST00000355947 TEX10Q9NXF1 929 aaPredicted RBP12.83□□□□□ -0.36
TRIM4-203ENST00000355947 FLVCR2Q9UPI3 526 aa12.83□□□□□ -0.36
TRIM4-203ENST00000355947 TET1Q8NFU7 2136 aa12.83□□□□□ -0.36
TRIM4-203ENST00000355947 OR1F1O43749 312 aa12.83□□□□□ -0.36
TRIM4-203ENST00000355947 EOMESO95936 686 aa12.83□□□□□ -0.36
TRIM4-203ENST00000355947 UBL4AP11441 157 aa12.83□□□□□ -0.36
TRIM4-203ENST00000355947 HLA-FP30511 346 aa12.83□□□□□ -0.36
TRIM4-203ENST00000355947 SSR2P43308 183 aa12.83□□□□□ -0.36
TRIM4-203ENST00000355947 TSPAN5P62079 268 aa12.83□□□□□ -0.36
TRIM4-203ENST00000355947 PLEKHS1Q5SXH7 462 aa12.83□□□□□ -0.36
TRIM4-203ENST00000355947 RASSF6Q6ZTQ3 369 aa12.83□□□□□ -0.36
TRIM4-203ENST00000355947 PGBD3Q8N328 593 aa12.83□□□□□ -0.36
TRIM4-203ENST00000355947 BOLLQ8N9W6 283 aaKnown RBP12.83□□□□□ -0.36
TRIM4-203ENST00000355947 GAL3ST1Q99999 423 aa12.83□□□□□ -0.36
TRIM4-203ENST00000355947 SYT17Q9BSW7 474 aa12.83□□□□□ -0.36
TRIM4-203ENST00000355947 GSDMCQ9BYG8 508 aa12.83□□□□□ -0.36
TRIM4-203ENST00000355947 TNFRSF10DQ9UBN6 386 aa12.83□□□□□ -0.36
TRIM4-203ENST00000355947 SRRDQ9UH36 339 aa12.83□□□□□ -0.36
TRIM4-203ENST00000355947 FNDC1Q4ZHG4 1894 aaPredicted RBP12.83□□□□□ -0.36
TRIM4-203ENST00000355947 B8ZZF3 427 aa12.83□□□□□ -0.36
TRIM4-203ENST00000355947 HCN1O60741 890 aa12.83□□□□□ -0.36
TRIM4-203ENST00000355947 ALDH1A1P00352 501 aa12.83□□□□□ -0.36
TRIM4-203ENST00000355947 C1GALT1C1LP0DN25 315 aa12.83□□□□□ -0.36
TRIM4-203ENST00000355947 ANXA3P12429 323 aa12.83□□□□□ -0.36
TRIM4-203ENST00000355947 HLA-DMAP28067 261 aa12.83□□□□□ -0.36
TRIM4-203ENST00000355947 PKLRP30613 574 aa12.83□□□□□ -0.36
TRIM4-203ENST00000355947 SLC1A3P43003 542 aa12.83□□□□□ -0.36
TRIM4-203ENST00000355947 EVX1P49640 407 aa12.83□□□□□ -0.36
TRIM4-203ENST00000355947 NCBP2P52298 156 aaKnown RBP eCLIP12.83□□□□□ -0.36
TRIM4-203ENST00000355947 FKBP1BP68106 108 aa12.83□□□□□ -0.36
TRIM4-203ENST00000355947 PRKCZQ05513 592 aa12.83□□□□□ -0.36
TRIM4-203ENST00000355947 SF3A2Q15428 464 aaKnown RBP12.83□□□□□ -0.36
TRIM4-203ENST00000355947 GPR68Q15743 365 aa12.83□□□□□ -0.36
TRIM4-203ENST00000355947 SLC36A4Q6YBV0 504 aa12.83□□□□□ -0.36
TRIM4-203ENST00000355947 CREB3L2Q70SY1 520 aa12.83□□□□□ -0.36
TRIM4-203ENST00000355947 TCTE3Q8IZS6 198 aa12.83□□□□□ -0.36
TRIM4-203ENST00000355947 CHCHD4Q8N4Q1 142 aa12.83□□□□□ -0.36
TRIM4-203ENST00000355947 SLC5A11Q8WWX8 675 aa12.83□□□□□ -0.36
TRIM4-203ENST00000355947 ZG16BQ96DA0 208 aa12.83□□□□□ -0.36
TRIM4-203ENST00000355947 C16orf58Q96GQ5 468 aa12.83□□□□□ -0.36
TRIM4-203ENST00000355947 CUEDC1Q9NWM3 386 aaPredicted RBP12.83□□□□□ -0.36
TRIM4-203ENST00000355947 H0YIV9 168 aa12.82□□□□□ -0.36
TRIM4-203ENST00000355947 LGALS8O00214 317 aa12.82□□□□□ -0.36
TRIM4-203ENST00000355947 KDM4BO94953 1096 aa12.82□□□□□ -0.36
TRIM4-203ENST00000355947 OR5F1O95221 314 aa12.82□□□□□ -0.36
TRIM4-203ENST00000355947 EIF4EP06730 217 aaKnown RBP12.82□□□□□ -0.36
TRIM4-203ENST00000355947 NPPBP16860 134 aa12.82□□□□□ -0.36
TRIM4-203ENST00000355947 UQCRC2P22695 453 aa12.82□□□□□ -0.36
TRIM4-203ENST00000355947 AKR1D1P51857 326 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms