RNA–Protein interactions for RNA: ENST00000355841.6

PDLIM7-202, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-202ENST00000355841 NADK2Q4G0N4 442 aa16.52■□□□□ 0.23
PDLIM7-202ENST00000355841 CT45A2Q5DJT8 189 aa16.52■□□□□ 0.23
PDLIM7-202ENST00000355841 C6orf10Q5SRN2 563 aa16.52■□□□□ 0.23
PDLIM7-202ENST00000355841 SPINK14Q6IE38 97 aa16.52■□□□□ 0.23
PDLIM7-202ENST00000355841 IGFL3Q6UXB1 125 aa16.52■□□□□ 0.23
PDLIM7-202ENST00000355841 IL20RBQ6UXL0 311 aa16.52■□□□□ 0.23
PDLIM7-202ENST00000355841 PIGWQ7Z7B1 504 aa16.52■□□□□ 0.23
PDLIM7-202ENST00000355841 MTDHQ86UE4 582 aaKnown RBP16.52■□□□□ 0.23
PDLIM7-202ENST00000355841 ZADH2Q8N4Q0 377 aa16.52■□□□□ 0.23
PDLIM7-202ENST00000355841 OR4N2Q8NGD1 307 aa16.52■□□□□ 0.23
PDLIM7-202ENST00000355841 ASB15Q8WXK1 588 aa16.52■□□□□ 0.23
PDLIM7-202ENST00000355841 MS4A4EQ96PG1 132 aa16.52■□□□□ 0.23
PDLIM7-202ENST00000355841 UTP23Q9BRU9 249 aaKnown RBP16.52■□□□□ 0.23
PDLIM7-202ENST00000355841 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.52■□□□□ 0.23
PDLIM7-202ENST00000355841 NTMQ9P121 344 aa16.52■□□□□ 0.23
PDLIM7-202ENST00000355841 GPR55Q9Y2T6 319 aaPredicted RBP16.52■□□□□ 0.23
PDLIM7-202ENST00000355841 TLN1Q9Y490 2541 aaKnown RBP16.52■□□□□ 0.23
PDLIM7-202ENST00000355841 CPAMD8Q8IZJ3 1885 aa16.51■□□□□ 0.23
PDLIM7-202ENST00000355841 RNF103-CHMP3A0A140T963 221 aa16.51■□□□□ 0.23
PDLIM7-202ENST00000355841 RFXANKO14593 260 aa16.51■□□□□ 0.23
PDLIM7-202ENST00000355841 PPICP45877 212 aa16.51■□□□□ 0.23
PDLIM7-202ENST00000355841 PSG6Q00889 435 aa16.51■□□□□ 0.23
PDLIM7-202ENST00000355841 KLF10Q13118 480 aa16.51■□□□□ 0.23
PDLIM7-202ENST00000355841 LASP1Q14847 261 aaKnown RBP16.51■□□□□ 0.23
PDLIM7-202ENST00000355841 GTDC1Q4AE62 458 aa16.51■□□□□ 0.23
PDLIM7-202ENST00000355841 MFSD12Q6NUT3 480 aa16.51■□□□□ 0.23
PDLIM7-202ENST00000355841 ZNF621Q6ZSS3 439 aa16.51■□□□□ 0.23
PDLIM7-202ENST00000355841 SLC44A2Q8IWA5 706 aaPredicted RBP16.51■□□□□ 0.23
PDLIM7-202ENST00000355841 OR5M3Q8NGP4 307 aa16.51■□□□□ 0.23
PDLIM7-202ENST00000355841 TM9SF4Q92544 642 aa16.51■□□□□ 0.23
PDLIM7-202ENST00000355841 SLC9A6Q92581 669 aa16.51■□□□□ 0.23
PDLIM7-202ENST00000355841 JADE3Q92613 823 aa16.51■□□□□ 0.23
PDLIM7-202ENST00000355841 HAS2Q92819 552 aa16.51■□□□□ 0.23
PDLIM7-202ENST00000355841 WBP1Q96G27 269 aa16.51■□□□□ 0.23
PDLIM7-202ENST00000355841 LCORQ96JN0 433 aaPredicted RBP16.51■□□□□ 0.23
PDLIM7-202ENST00000355841 BTBD9Q96Q07 612 aa16.51■□□□□ 0.23
PDLIM7-202ENST00000355841 PCDHGB7Q9Y5F8 929 aa16.51■□□□□ 0.23
PDLIM7-202ENST00000355841 OR5H15A6NDH6 313 aa16.5■□□□□ 0.23
PDLIM7-202ENST00000355841 CYB561P49447 251 aa16.5■□□□□ 0.23
PDLIM7-202ENST00000355841 HLCSP50747 726 aa16.5■□□□□ 0.23
PDLIM7-202ENST00000355841 IRX1P78414 480 aaPredicted RBP16.5■□□□□ 0.23
PDLIM7-202ENST00000355841 TLR1Q15399 786 aa16.5■□□□□ 0.23
PDLIM7-202ENST00000355841 OR1C1Q15619 314 aa16.5■□□□□ 0.23
PDLIM7-202ENST00000355841 PAGE3Q5JUK9 113 aa16.5■□□□□ 0.23
PDLIM7-202ENST00000355841 LYPD8Q6UX82 237 aa16.5■□□□□ 0.23
PDLIM7-202ENST00000355841 MDGA2Q7Z553 956 aa16.5■□□□□ 0.23
PDLIM7-202ENST00000355841 ZNF227Q86WZ6 799 aa16.5■□□□□ 0.23
PDLIM7-202ENST00000355841 SLC16A11Q8NCK7 471 aa16.5■□□□□ 0.23
PDLIM7-202ENST00000355841 GTF2H4Q92759 462 aa16.5■□□□□ 0.23
PDLIM7-202ENST00000355841 TP53INP1Q96A56 240 aa16.5■□□□□ 0.23
PDLIM7-202ENST00000355841 ITCHQ96J02 903 aa16.5■□□□□ 0.23
PDLIM7-202ENST00000355841 SLC35A5Q9BS91 424 aa16.5■□□□□ 0.23
PDLIM7-202ENST00000355841 HES7Q9BYE0 225 aa16.5■□□□□ 0.23
PDLIM7-202ENST00000355841 RMND5AQ9H871 391 aa16.5■□□□□ 0.23
PDLIM7-202ENST00000355841 GPATCH2Q9NW75 528 aa16.5■□□□□ 0.23
PDLIM7-202ENST00000355841 SLAMF8Q9P0V8 285 aa16.5■□□□□ 0.23
PDLIM7-202ENST00000355841 LRFN1Q9P244 771 aa16.5■□□□□ 0.23
PDLIM7-202ENST00000355841 FRG2CA6NGY1 282 aa16.5■□□□□ 0.23
PDLIM7-202ENST00000355841 A8MVJ9 347 aa16.5■□□□□ 0.23
PDLIM7-202ENST00000355841 FAM107AO95990 144 aa16.5■□□□□ 0.23
PDLIM7-202ENST00000355841 IFI6P09912 130 aa16.5■□□□□ 0.23
PDLIM7-202ENST00000355841 ACP2P11117 423 aa16.5■□□□□ 0.23
PDLIM7-202ENST00000355841 SFTPCP11686 197 aa16.5■□□□□ 0.23
PDLIM7-202ENST00000355841 DRD5P21918 477 aa16.5■□□□□ 0.23
PDLIM7-202ENST00000355841 ABCD3P28288 659 aa16.5■□□□□ 0.23
PDLIM7-202ENST00000355841 GABRA3P34903 492 aa16.5■□□□□ 0.23
PDLIM7-202ENST00000355841 TRHRP34981 398 aaPredicted RBP16.5■□□□□ 0.23
PDLIM7-202ENST00000355841 TNFSF10P50591 281 aa16.5■□□□□ 0.23
PDLIM7-202ENST00000355841 DESI1Q6ICB0 168 aa16.5■□□□□ 0.23
PDLIM7-202ENST00000355841 C6orf120Q7Z4R8 191 aa16.5■□□□□ 0.23
PDLIM7-202ENST00000355841 TAGAPQ8N103 731 aa16.5■□□□□ 0.23
PDLIM7-202ENST00000355841 CYP4Z2PQ8N1L4 340 aa16.5■□□□□ 0.23
PDLIM7-202ENST00000355841 C17orf47Q8NEP4 570 aa16.5■□□□□ 0.23
PDLIM7-202ENST00000355841 OR56A1Q8NGH5 318 aa16.5■□□□□ 0.23
PDLIM7-202ENST00000355841 GOT1L1Q8NHS2 421 aaPredicted RBP16.5■□□□□ 0.23
PDLIM7-202ENST00000355841 SLC22A8Q8TCC7 542 aa16.5■□□□□ 0.23
PDLIM7-202ENST00000355841 PNPT1Q8TCS8 783 aaKnown RBP16.5■□□□□ 0.23
PDLIM7-202ENST00000355841 SFXN5Q8TD22 340 aa16.5■□□□□ 0.23
PDLIM7-202ENST00000355841 PIK3R3Q92569 461 aa16.5■□□□□ 0.23
PDLIM7-202ENST00000355841 RNF32Q9H0A6 362 aa16.5■□□□□ 0.23
PDLIM7-202ENST00000355841 HPF1Q9NWY4 346 aa16.5■□□□□ 0.23
PDLIM7-202ENST00000355841 VPS4AQ9UN37 437 aa16.5■□□□□ 0.23
PDLIM7-202ENST00000355841 NPFFR2Q9Y5X5 522 aa16.5■□□□□ 0.23
PDLIM7-202ENST00000355841 CHD6Q8TD26 2715 aa16.49■□□□□ 0.23
PDLIM7-202ENST00000355841 LOC100653049A0A140TA62 436 aa16.49■□□□□ 0.23
PDLIM7-202ENST00000355841 A0A1W2PP18 115 aa16.49■□□□□ 0.23
PDLIM7-202ENST00000355841 GXYLT2A0PJZ3 443 aa16.49■□□□□ 0.23
PDLIM7-202ENST00000355841 DPM1O60762 260 aa16.49■□□□□ 0.23
PDLIM7-202ENST00000355841 KRT34O76011 436 aa16.49■□□□□ 0.23
PDLIM7-202ENST00000355841 NEURL1O76050 574 aa16.49■□□□□ 0.23
PDLIM7-202ENST00000355841 PRB1P04280 392 aa16.49■□□□□ 0.23
PDLIM7-202ENST00000355841 SNRPB2P08579 225 aaKnown RBP16.49■□□□□ 0.23
PDLIM7-202ENST00000355841 UQCRC2P22695 453 aa16.49■□□□□ 0.23
PDLIM7-202ENST00000355841 CHI3L1P36222 383 aaPredicted RBP16.49■□□□□ 0.23
PDLIM7-202ENST00000355841 CASRP41180 1078 aa16.49■□□□□ 0.23
PDLIM7-202ENST00000355841 FBXW4P57775 412 aa16.49■□□□□ 0.23
PDLIM7-202ENST00000355841 NFATC3Q12968 1075 aa16.49■□□□□ 0.23
PDLIM7-202ENST00000355841 SLC6A19Q695T7 634 aa16.49■□□□□ 0.23
PDLIM7-202ENST00000355841 MSANTD1Q6ZTZ1 278 aa16.49■□□□□ 0.23
PDLIM7-202ENST00000355841 GALNT10Q86SR1 603 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms