RNA–Protein interactions for RNA: ENST00000354241.5

TRIM4-202, Transcript of tripartite motif containing 4, humanhuman

TSL 1 (best) BASIC

Gene TRIM4, Length 1,942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-202ENST00000354241 PNO1Q9NRX1 252 aaKnown RBP19.15■□□□□ 0.66
TRIM4-202ENST00000354241 CALML5Q9NZT1 146 aa19.15■□□□□ 0.66
TRIM4-202ENST00000354241 PADI2Q9Y2J8 665 aa19.15■□□□□ 0.66
TRIM4-202ENST00000354241 SPEGQ15772 3267 aa19.15■□□□□ 0.66
TRIM4-202ENST00000354241 A8MVJ9 347 aa19.14■□□□□ 0.65
TRIM4-202ENST00000354241 PRAMEF8Q5VWM4 474 aa19.14■□□□□ 0.65
TRIM4-202ENST00000354241 MLIPQ5VWP3 458 aa19.14■□□□□ 0.65
TRIM4-202ENST00000354241 PRAMEF7Q5VXH5 474 aa19.14■□□□□ 0.65
TRIM4-202ENST00000354241 HEPHL1Q6MZM0 1159 aa19.14■□□□□ 0.65
TRIM4-202ENST00000354241 COX15Q7KZN9 410 aa19.14■□□□□ 0.65
TRIM4-202ENST00000354241 PACRGLQ8N7B6 248 aa19.14■□□□□ 0.65
TRIM4-202ENST00000354241 RASSF5Q8WWW0 418 aa19.14■□□□□ 0.65
TRIM4-202ENST00000354241 SDCCAG3Q96C92 435 aa19.14■□□□□ 0.65
TRIM4-202ENST00000354241 BTBD2Q9BX70 525 aa19.14■□□□□ 0.65
TRIM4-202ENST00000354241 SEMA4GQ9NTN9 838 aa19.14■□□□□ 0.65
TRIM4-202ENST00000354241 CTSFQ9UBX1 484 aa19.14■□□□□ 0.65
TRIM4-202ENST00000354241 ERVK-19Q9WJR5 959 aa19.14■□□□□ 0.65
TRIM4-202ENST00000354241 U3KQV3 271 aa19.14■□□□□ 0.65
TRIM4-202ENST00000354241 EI24O14681 340 aa19.13■□□□□ 0.65
TRIM4-202ENST00000354241 GDF9O60383 454 aa19.13■□□□□ 0.65
TRIM4-202ENST00000354241 RASAL1O95294 804 aa19.13■□□□□ 0.65
TRIM4-202ENST00000354241 FESP07332 822 aa19.13■□□□□ 0.65
TRIM4-202ENST00000354241 HBQ1P09105 142 aa19.13■□□□□ 0.65
TRIM4-202ENST00000354241 ETS2P15036 469 aa19.13■□□□□ 0.65
TRIM4-202ENST00000354241 RHAGQ02094 409 aa19.13■□□□□ 0.65
TRIM4-202ENST00000354241 CHRNEQ04844 493 aa19.13■□□□□ 0.65
TRIM4-202ENST00000354241 OTUD3Q5T2D3 398 aaPredicted RBP19.13■□□□□ 0.65
TRIM4-202ENST00000354241 TBPL2Q6SJ96 375 aa19.13■□□□□ 0.65
TRIM4-202ENST00000354241 STK32CQ86UX6 486 aa19.13■□□□□ 0.65
TRIM4-202ENST00000354241 ZDHHC13Q8IUH4 622 aa19.13■□□□□ 0.65
TRIM4-202ENST00000354241 COX18Q8N8Q8 333 aa19.13■□□□□ 0.65
TRIM4-202ENST00000354241 GPR32P1Q8NGA4 272 aa19.13■□□□□ 0.65
TRIM4-202ENST00000354241 GPR151Q8TDV0 419 aa19.13■□□□□ 0.65
TRIM4-202ENST00000354241 PIK3R3Q92569 461 aa19.13■□□□□ 0.65
TRIM4-202ENST00000354241 PROX1Q92786 737 aa19.13■□□□□ 0.65
TRIM4-202ENST00000354241 BTBD9Q96Q07 612 aa19.13■□□□□ 0.65
TRIM4-202ENST00000354241 SPATA5L1Q9BVQ7 753 aa19.13■□□□□ 0.65
TRIM4-202ENST00000354241 SLC38A1Q9H2H9 487 aa19.13■□□□□ 0.65
TRIM4-202ENST00000354241 SLC22A11Q9NSA0 550 aa19.13■□□□□ 0.65
TRIM4-202ENST00000354241 VNN3Q9NY84 501 aa19.13■□□□□ 0.65
TRIM4-202ENST00000354241 COL27A1Q8IZC6 1860 aaPredicted RBP19.13■□□□□ 0.65
TRIM4-202ENST00000354241 A8MUA0 341 aa19.13■□□□□ 0.65
TRIM4-202ENST00000354241 C17orf105B2RV13 164 aa19.13■□□□□ 0.65
TRIM4-202ENST00000354241 G3V2T6 193 aa19.13■□□□□ 0.65
TRIM4-202ENST00000354241 POLR1CO15160 346 aaPredicted RBP19.13■□□□□ 0.65
TRIM4-202ENST00000354241 RPSAP08865 295 aaKnown RBP19.13■□□□□ 0.65
TRIM4-202ENST00000354241 FGF5P12034 268 aa19.13■□□□□ 0.65
TRIM4-202ENST00000354241 UQCRBP14927 111 aa19.13■□□□□ 0.65
TRIM4-202ENST00000354241 KCNJ5P48544 419 aa19.13■□□□□ 0.65
TRIM4-202ENST00000354241 IL11RAQ14626 422 aa19.13■□□□□ 0.65
TRIM4-202ENST00000354241 ARHGAP11BQ3KRB8 267 aa19.13■□□□□ 0.65
TRIM4-202ENST00000354241 IQCCQ4KMZ1 466 aa19.13■□□□□ 0.65
TRIM4-202ENST00000354241 NKAIN1Q4KMZ8 207 aa19.13■□□□□ 0.65
TRIM4-202ENST00000354241 CMPK2Q5EBM0 449 aa19.13■□□□□ 0.65
TRIM4-202ENST00000354241 EXOSC6Q5RKV6 272 aaKnown RBP19.13■□□□□ 0.65
TRIM4-202ENST00000354241 RBM44Q6ZP01 1051 aaKnown RBP19.13■□□□□ 0.65
TRIM4-202ENST00000354241 BPHLQ86WA6 291 aaPredicted RBP19.13■□□□□ 0.65
TRIM4-202ENST00000354241 ZNF597Q96LX8 424 aa19.13■□□□□ 0.65
TRIM4-202ENST00000354241 STACQ99469 402 aa19.13■□□□□ 0.65
TRIM4-202ENST00000354241 QRSL1Q9H0R6 528 aaKnown RBP19.13■□□□□ 0.65
TRIM4-202ENST00000354241 FOLH1BQ9HBA9 442 aa19.13■□□□□ 0.65
TRIM4-202ENST00000354241 MKL2Q9ULH7 1088 aa19.13■□□□□ 0.65
TRIM4-202ENST00000354241 LRCH1Q9Y2L9 728 aa19.13■□□□□ 0.65
TRIM4-202ENST00000354241 HCN4Q9Y3Q4 1203 aa19.13■□□□□ 0.65
TRIM4-202ENST00000354241 MAGED1Q9Y5V3 778 aaPredicted RBP19.13■□□□□ 0.65
TRIM4-202ENST00000354241 NINQ8N4C6 2090 aa19.13■□□□□ 0.65
TRIM4-202ENST00000354241 IGKV3D-11A0A0A0MRZ8 115 aa19.12■□□□□ 0.65
TRIM4-202ENST00000354241 C7orf72A4D263 438 aa19.12■□□□□ 0.65
TRIM4-202ENST00000354241 PRAMEF25A6NGN4 478 aa19.12■□□□□ 0.65
TRIM4-202ENST00000354241 H0YJX3 145 aa19.12■□□□□ 0.65
TRIM4-202ENST00000354241 PRAMEF2O60811 474 aa19.12■□□□□ 0.65
TRIM4-202ENST00000354241 CCL4P13236 92 aa19.12■□□□□ 0.65
TRIM4-202ENST00000354241 GALNSP34059 522 aa19.12■□□□□ 0.65
TRIM4-202ENST00000354241 GABRA3P34903 492 aa19.12■□□□□ 0.65
TRIM4-202ENST00000354241 HSPA13P48723 471 aa19.12■□□□□ 0.65
TRIM4-202ENST00000354241 EFNA3P52797 238 aa19.12■□□□□ 0.65
TRIM4-202ENST00000354241 DCDP81605 110 aaKnown RBP19.12■□□□□ 0.65
TRIM4-202ENST00000354241 TCF15Q12870 199 aa19.12■□□□□ 0.65
TRIM4-202ENST00000354241 SHISA6Q6ZSJ9 500 aa19.12■□□□□ 0.65
TRIM4-202ENST00000354241 TMEM179BQ7Z7N9 219 aa19.12■□□□□ 0.65
TRIM4-202ENST00000354241 LAPTM4BQ86VI4 370 aa19.12■□□□□ 0.65
TRIM4-202ENST00000354241 SVOPLQ8N434 492 aa19.12■□□□□ 0.65
TRIM4-202ENST00000354241 OR5K1Q8NHB7 308 aa19.12■□□□□ 0.65
TRIM4-202ENST00000354241 MAGEE2Q8TD90 523 aaPredicted RBP19.12■□□□□ 0.65
TRIM4-202ENST00000354241 ZNF578Q96N58 590 aaPredicted RBP19.12■□□□□ 0.65
TRIM4-202ENST00000354241 RSPO3Q9BXY4 272 aaPredicted RBP19.12■□□□□ 0.65
TRIM4-202ENST00000354241 C8orf4Q9NR00 106 aa19.12■□□□□ 0.65
TRIM4-202ENST00000354241 DUSP22Q9NRW4 184 aa19.12■□□□□ 0.65
TRIM4-202ENST00000354241 NDUFAF4Q9P032 175 aa19.12■□□□□ 0.65
TRIM4-202ENST00000354241 PCDHGB3Q9Y5G1 929 aa19.12■□□□□ 0.65
TRIM4-202ENST00000354241 HEMK1Q9Y5R4 338 aaPredicted RBP19.12■□□□□ 0.65
TRIM4-202ENST00000354241 C4orf47A7E2U8 309 aa19.12■□□□□ 0.65
TRIM4-202ENST00000354241 ALPPP05187 535 aa19.12■□□□□ 0.65
TRIM4-202ENST00000354241 YAP1P46937 504 aaKnown RBP19.12■□□□□ 0.65
TRIM4-202ENST00000354241 EMDP50402 254 aa19.12■□□□□ 0.65
TRIM4-202ENST00000354241 ZNHIT3Q15649 155 aaPredicted RBP19.12■□□□□ 0.65
TRIM4-202ENST00000354241 DCST2Q5T1A1 773 aa19.12■□□□□ 0.65
TRIM4-202ENST00000354241 CCNJQ5T5M9 372 aa19.12■□□□□ 0.65
TRIM4-202ENST00000354241 TSEN54Q7Z6J9 526 aaKnown RBP19.12■□□□□ 0.65
TRIM4-202ENST00000354241 TMEM151BQ8IW70 566 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms