RNA–Protein interactions for RNA: ENST00000353411.10

SKP1-202, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SKP1, Length 9,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-202ENST00000353411 PQBP1O60828 265 aaKnown RBP4.8□□□□□ -1.64
SKP1-202ENST00000353411 AQP8O94778 261 aa4.8□□□□□ -1.64
SKP1-202ENST00000353411 SIX3O95343 332 aaPredicted RBP4.8□□□□□ -1.64
SKP1-202ENST00000353411 THBS1P07996 1170 aa4.8□□□□□ -1.64
SKP1-202ENST00000353411 C5AR1P21730 350 aa4.8□□□□□ -1.64
SKP1-202ENST00000353411 EDNRAP25101 427 aa4.8□□□□□ -1.64
SKP1-202ENST00000353411 ACVR2AP27037 513 aa4.8□□□□□ -1.64
SKP1-202ENST00000353411 BMPR1AP36894 532 aa4.8□□□□□ -1.64
SKP1-202ENST00000353411 GRB7Q14451 532 aa4.8□□□□□ -1.64
SKP1-202ENST00000353411 ZNF273Q14593 569 aa4.8□□□□□ -1.64
SKP1-202ENST00000353411 CATSPEREQ5SY80 951 aa4.8□□□□□ -1.64
SKP1-202ENST00000353411 PET117Q6UWS5 81 aa4.8□□□□□ -1.64
SKP1-202ENST00000353411 NDUFAF7Q7L592 441 aa4.8□□□□□ -1.64
SKP1-202ENST00000353411 GALNTL5Q7Z4T8 443 aa4.8□□□□□ -1.64
SKP1-202ENST00000353411 ZDHHC14Q8IZN3 488 aa4.8□□□□□ -1.64
SKP1-202ENST00000353411 C15orf54Q8N8G6 183 aa4.8□□□□□ -1.64
SKP1-202ENST00000353411 SVIPQ8NHG7 77 aa4.8□□□□□ -1.64
SKP1-202ENST00000353411 FOXRED1Q96CU9 486 aaPredicted RBP4.8□□□□□ -1.64
SKP1-202ENST00000353411 ACTRT3Q9BYD9 372 aa4.8□□□□□ -1.64
SKP1-202ENST00000353411 MEPEQ9NQ76 525 aaPredicted RBP4.8□□□□□ -1.64
SKP1-202ENST00000353411 NLGN3Q9NZ94 848 aa4.8□□□□□ -1.64
SKP1-202ENST00000353411 ZNF214Q9UL59 606 aaPredicted RBP4.8□□□□□ -1.64
SKP1-202ENST00000353411 KIF13BQ9NQT8 1826 aa4.8□□□□□ -1.64
SKP1-202ENST00000353411 CILPO75339 1184 aa4.8□□□□□ -1.64
SKP1-202ENST00000353411 CBLP22681 906 aa4.8□□□□□ -1.64
SKP1-202ENST00000353411 PTH2RP49190 550 aa4.8□□□□□ -1.64
SKP1-202ENST00000353411 TAS2R31P59538 309 aa4.8□□□□□ -1.64
SKP1-202ENST00000353411 FKBP1AP62942 108 aaKnown RBP4.8□□□□□ -1.64
SKP1-202ENST00000353411 CDK6Q00534 326 aa4.8□□□□□ -1.64
SKP1-202ENST00000353411 FPGSQ05932 587 aa4.8□□□□□ -1.64
SKP1-202ENST00000353411 GNMTQ14749 295 aa4.8□□□□□ -1.64
SKP1-202ENST00000353411 LASP1Q14847 261 aaKnown RBP4.8□□□□□ -1.64
SKP1-202ENST00000353411 IRF4Q15306 451 aa4.8□□□□□ -1.64
SKP1-202ENST00000353411 ABCA11PQ4W5N1 156 aa4.8□□□□□ -1.64
SKP1-202ENST00000353411 ZNF585AQ6P3V2 769 aa4.8□□□□□ -1.64
SKP1-202ENST00000353411 GPR155Q7Z3F1 870 aa4.8□□□□□ -1.64
SKP1-202ENST00000353411 SERPINA11Q86U17 422 aa4.8□□□□□ -1.64
SKP1-202ENST00000353411 CLEC10AQ8IUN9 316 aa4.8□□□□□ -1.64
SKP1-202ENST00000353411 SENP8Q96LD8 212 aa4.8□□□□□ -1.64
SKP1-202ENST00000353411 PKP4Q99569 1192 aa4.8□□□□□ -1.64
SKP1-202ENST00000353411 SLC35A5Q9BS91 424 aa4.8□□□□□ -1.64
SKP1-202ENST00000353411 LMAN2LQ9H0V9 348 aa4.8□□□□□ -1.64
SKP1-202ENST00000353411 MRPS30Q9NP92 439 aaKnown RBP4.8□□□□□ -1.64
SKP1-202ENST00000353411 ADARB2Q9NS39 739 aaKnown RBP4.8□□□□□ -1.64
SKP1-202ENST00000353411 ABCC13Q9NSE7 274 aa4.8□□□□□ -1.64
SKP1-202ENST00000353411 PCDHGA5Q9Y5G8 931 aa4.8□□□□□ -1.64
SKP1-202ENST00000353411 DUOX1Q9NRD9 1551 aa4.8□□□□□ -1.64
SKP1-202ENST00000353411 AHCTF1Q8WYP5 2266 aa4.8□□□□□ -1.64
SKP1-202ENST00000353411 J3QR89 54 aa4.8□□□□□ -1.64
SKP1-202ENST00000353411 RCBTB2O95199 551 aa4.8□□□□□ -1.64
SKP1-202ENST00000353411 OSMP13725 252 aa4.8□□□□□ -1.64
SKP1-202ENST00000353411 ADRA1BP35368 520 aa4.8□□□□□ -1.64
SKP1-202ENST00000353411 PTGER3P43115 390 aa4.8□□□□□ -1.64
SKP1-202ENST00000353411 DNASE1L1P49184 302 aa4.8□□□□□ -1.64
SKP1-202ENST00000353411 H3F3AP84243 136 aa4.8□□□□□ -1.64
SKP1-202ENST00000353411 BOP1Q14137 746 aaKnown RBP4.8□□□□□ -1.64
SKP1-202ENST00000353411 EIPR1Q53HC9 387 aa4.8□□□□□ -1.64
SKP1-202ENST00000353411 PDZD3Q86UT5 571 aa4.8□□□□□ -1.64
SKP1-202ENST00000353411 CMIPQ8IY22 773 aa4.8□□□□□ -1.64
SKP1-202ENST00000353411 ACBD7Q8N6N7 88 aa4.8□□□□□ -1.64
SKP1-202ENST00000353411 BOLLQ8N9W6 283 aaKnown RBP4.8□□□□□ -1.64
SKP1-202ENST00000353411 BBS1Q8NFJ9 593 aa4.8□□□□□ -1.64
SKP1-202ENST00000353411 OR8D4Q8NGM9 314 aa4.8□□□□□ -1.64
SKP1-202ENST00000353411 UCN3Q969E3 161 aa4.8□□□□□ -1.64
SKP1-202ENST00000353411 SLC25A36Q96CQ1 311 aa4.8□□□□□ -1.64
SKP1-202ENST00000353411 AARSD1Q9BTE6 412 aaKnown RBP4.8□□□□□ -1.64
SKP1-202ENST00000353411 SGK2Q9HBY8 427 aa4.8□□□□□ -1.64
SKP1-202ENST00000353411 PLCXD1Q9NUJ7 323 aa4.8□□□□□ -1.64
SKP1-202ENST00000353411 POMT2Q9UKY4 750 aa4.8□□□□□ -1.64
SKP1-202ENST00000353411 SCML1Q9UN30 329 aa4.8□□□□□ -1.64
SKP1-202ENST00000353411 PCDHGA6Q9Y5G7 932 aa4.8□□□□□ -1.64
SKP1-202ENST00000353411 DNAJC15Q9Y5T4 150 aa4.8□□□□□ -1.64
SKP1-202ENST00000353411 PXDNQ92626 1479 aa4.8□□□□□ -1.64
SKP1-202ENST00000353411 MT-CYBP00156 380 aaPredicted RBP4.8□□□□□ -1.64
SKP1-202ENST00000353411 INHBBP09529 407 aa4.8□□□□□ -1.64
SKP1-202ENST00000353411 AKAIN1P0CW23 69 aa4.8□□□□□ -1.64
SKP1-202ENST00000353411 GLULP15104 373 aa4.8□□□□□ -1.64
SKP1-202ENST00000353411 ACPPP15309 386 aa4.8□□□□□ -1.64
SKP1-202ENST00000353411 AQP2P41181 271 aa4.8□□□□□ -1.64
SKP1-202ENST00000353411 CRISP3P54108 245 aa4.8□□□□□ -1.64
SKP1-202ENST00000353411 RAP1AP62834 184 aa4.8□□□□□ -1.64
SKP1-202ENST00000353411 IFITM2Q01629 132 aa4.8□□□□□ -1.64
SKP1-202ENST00000353411 FABP9Q0Z7S8 132 aa4.8□□□□□ -1.64
SKP1-202ENST00000353411 SLC39A12Q504Y0 691 aa4.8□□□□□ -1.64
SKP1-202ENST00000353411 FAM26DQ5JW98 314 aa4.8□□□□□ -1.64
SKP1-202ENST00000353411 XAF1Q6GPH4 301 aa4.8□□□□□ -1.64
SKP1-202ENST00000353411 TMEM65Q6PI78 240 aa4.8□□□□□ -1.64
SKP1-202ENST00000353411 SLC16A13Q7RTY0 426 aa4.8□□□□□ -1.64
SKP1-202ENST00000353411 OVCH2Q7RTZ1 564 aa4.8□□□□□ -1.64
SKP1-202ENST00000353411 TRAPPC5Q8IUR0 188 aa4.8□□□□□ -1.64
SKP1-202ENST00000353411 OR2L8Q8NGY9 312 aa4.8□□□□□ -1.64
SKP1-202ENST00000353411 CDT1Q9H211 546 aa4.8□□□□□ -1.64
SKP1-202ENST00000353411 DDX31Q9H8H2 851 aaKnown RBP4.8□□□□□ -1.64
SKP1-202ENST00000353411 C1GALT1Q9NS00 363 aa4.8□□□□□ -1.64
SKP1-202ENST00000353411 GSKIPQ9P0R6 139 aa4.8□□□□□ -1.64
SKP1-202ENST00000353411 IKZF2Q9UKS7 526 aa4.8□□□□□ -1.64
SKP1-202ENST00000353411 FZD10Q9ULW2 581 aa4.8□□□□□ -1.64
SKP1-202ENST00000353411 MEGF6O75095 1541 aa4.8□□□□□ -1.64
SKP1-202ENST00000353411 A0A1B0GTW7 788 aa4.8□□□□□ -1.64
SKP1-202ENST00000353411 FAM230AA0A1W2PPH8 454 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms