RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 ZNF831Q5JPB2 1677 aa12.52□□□□□ -0.41
IFT88-202ENST00000351808 C22orf31O95567 290 aa12.52□□□□□ -0.41
IFT88-202ENST00000351808 WNT1P04628 370 aa12.52□□□□□ -0.41
IFT88-202ENST00000351808 EBLN1P0CF75 366 aa12.52□□□□□ -0.41
IFT88-202ENST00000351808 OR12D1P0DN82 309 aa12.52□□□□□ -0.41
IFT88-202ENST00000351808 ETFAP13804 333 aa12.52□□□□□ -0.41
IFT88-202ENST00000351808 PPP3CBP16298 524 aa12.52□□□□□ -0.41
IFT88-202ENST00000351808 RAG2P55895 527 aa12.52□□□□□ -0.41
IFT88-202ENST00000351808 SNTB2Q13425 540 aaKnown RBP12.52□□□□□ -0.41
IFT88-202ENST00000351808 OCLNQ16625 522 aa12.52□□□□□ -0.41
IFT88-202ENST00000351808 SLC5A12Q1EHB4 618 aa12.52□□□□□ -0.41
IFT88-202ENST00000351808 SYT14P1Q58G82 188 aa12.52□□□□□ -0.41
IFT88-202ENST00000351808 PRAMEF13Q5VWM6 474 aa12.52□□□□□ -0.41
IFT88-202ENST00000351808 LRRN1Q6UXK5 716 aa12.52□□□□□ -0.41
IFT88-202ENST00000351808 USP53Q70EK8 1073 aa12.52□□□□□ -0.41
IFT88-202ENST00000351808 SERPINA12Q8IW75 414 aa12.52□□□□□ -0.41
IFT88-202ENST00000351808 OXR1Q8N573 874 aa12.52□□□□□ -0.41
IFT88-202ENST00000351808 OR14A16Q8NHC5 309 aa12.52□□□□□ -0.41
IFT88-202ENST00000351808 HHIPQ96QV1 700 aa12.52□□□□□ -0.41
IFT88-202ENST00000351808 THSD1Q9NS62 852 aa12.52□□□□□ -0.41
IFT88-202ENST00000351808 SEMA3GQ9NS98 782 aa12.52□□□□□ -0.41
IFT88-202ENST00000351808 NLE1Q9NVX2 485 aaPredicted RBP12.52□□□□□ -0.41
IFT88-202ENST00000351808 ZSCAN32Q9NX65 697 aa12.52□□□□□ -0.41
IFT88-202ENST00000351808 TRPS1Q9UHF7 1281 aa12.52□□□□□ -0.41
IFT88-202ENST00000351808 SULT1C2O00338 296 aa12.52□□□□□ -0.41
IFT88-202ENST00000351808 GALR3O60755 368 aaPredicted RBP12.52□□□□□ -0.41
IFT88-202ENST00000351808 RBMS1P29558 406 aaKnown RBP12.52□□□□□ -0.41
IFT88-202ENST00000351808 HOXC13P31276 330 aa12.52□□□□□ -0.41
IFT88-202ENST00000351808 VEGFCP49767 419 aa12.52□□□□□ -0.41
IFT88-202ENST00000351808 TAF6P49848 677 aa12.52□□□□□ -0.41
IFT88-202ENST00000351808 SEC61A1P61619 476 aaKnown RBP12.52□□□□□ -0.41
IFT88-202ENST00000351808 SNTB1Q13884 538 aaKnown RBP12.52□□□□□ -0.41
IFT88-202ENST00000351808 COX20Q5RI15 118 aa12.52□□□□□ -0.41
IFT88-202ENST00000351808 MBOAT1Q6ZNC8 495 aa12.52□□□□□ -0.41
IFT88-202ENST00000351808 SYT12Q8IV01 421 aa12.52□□□□□ -0.41
IFT88-202ENST00000351808 NAXDQ8IW45 347 aa12.52□□□□□ -0.41
IFT88-202ENST00000351808 CHCHD4Q8N4Q1 142 aa12.52□□□□□ -0.41
IFT88-202ENST00000351808 OR10K1Q8NGX5 313 aa12.52□□□□□ -0.41
IFT88-202ENST00000351808 PHOSPHO1Q8TCT1 267 aa12.52□□□□□ -0.41
IFT88-202ENST00000351808 PRMT8Q9NR22 394 aaPredicted RBP12.52□□□□□ -0.41
IFT88-202ENST00000351808 MRPL15Q9P015 296 aaKnown RBP12.52□□□□□ -0.41
IFT88-202ENST00000351808 COL11A1P12107 1806 aaPredicted RBP12.51□□□□□ -0.41
IFT88-202ENST00000351808 MCM3APO60318 1980 aa12.51□□□□□ -0.41
IFT88-202ENST00000351808 AKR7A3O95154 331 aa12.51□□□□□ -0.41
IFT88-202ENST00000351808 HLA-DPB1P04440 258 aa12.51□□□□□ -0.41
IFT88-202ENST00000351808 ZNF3P17036 446 aa12.51□□□□□ -0.41
IFT88-202ENST00000351808 GJA1P17302 382 aa12.51□□□□□ -0.41
IFT88-202ENST00000351808 E2F1Q01094 437 aa12.51□□□□□ -0.41
IFT88-202ENST00000351808 GAB1Q13480 694 aa12.51□□□□□ -0.41
IFT88-202ENST00000351808 SF1Q15637 639 aaKnown RBP12.51□□□□□ -0.41
IFT88-202ENST00000351808 GUCA2BQ16661 112 aa12.51□□□□□ -0.41
IFT88-202ENST00000351808 ATP13A5Q4VNC0 1218 aa12.51□□□□□ -0.41
IFT88-202ENST00000351808 XKR6Q5GH73 641 aa12.51□□□□□ -0.41
IFT88-202ENST00000351808 NHLRC1Q6VVB1 395 aa12.51□□□□□ -0.41
IFT88-202ENST00000351808 CIR1Q86X95 450 aaPredicted RBP12.51□□□□□ -0.41
IFT88-202ENST00000351808 NFKBIDQ8NI38 313 aa12.51□□□□□ -0.41
IFT88-202ENST00000351808 ZNF582Q96NG8 517 aaPredicted RBP12.51□□□□□ -0.41
IFT88-202ENST00000351808 ARHGAP9Q9BRR9 750 aa12.51□□□□□ -0.41
IFT88-202ENST00000351808 NTMT1Q9BV86 223 aa12.51□□□□□ -0.41
IFT88-202ENST00000351808 OR10A4Q9H209 315 aa12.51□□□□□ -0.41
IFT88-202ENST00000351808 BPIFA1Q9NP55 256 aa12.51□□□□□ -0.41
IFT88-202ENST00000351808 NPDC1Q9NQX5 325 aaPredicted RBP12.51□□□□□ -0.41
IFT88-202ENST00000351808 FLRT1Q9NZU1 646 aa12.51□□□□□ -0.41
IFT88-202ENST00000351808 NDOR1Q9UHB4 597 aa12.51□□□□□ -0.41
IFT88-202ENST00000351808 MYBPHLA2RUH7 354 aa12.51□□□□□ -0.41
IFT88-202ENST00000351808 ADAM12O43184 909 aa12.51□□□□□ -0.41
IFT88-202ENST00000351808 SLC28A2O43868 658 aa12.51□□□□□ -0.41
IFT88-202ENST00000351808 EPB42P16452 691 aa12.51□□□□□ -0.41
IFT88-202ENST00000351808 ATP5C1P36542 298 aaKnown RBP12.51□□□□□ -0.41
IFT88-202ENST00000351808 ZNF140P52738 457 aaPredicted RBP12.51□□□□□ -0.41
IFT88-202ENST00000351808 GAS1P54826 345 aa12.51□□□□□ -0.41
IFT88-202ENST00000351808 SEC23BQ15437 767 aa12.51□□□□□ -0.41
IFT88-202ENST00000351808 ZNF425Q6IV72 752 aa12.51□□□□□ -0.41
IFT88-202ENST00000351808 NOXRED1Q6NXP6 359 aa12.51□□□□□ -0.41
IFT88-202ENST00000351808 MSANTD1Q6ZTZ1 278 aa12.51□□□□□ -0.41
IFT88-202ENST00000351808 ZNF565Q8N9K5 539 aa12.51□□□□□ -0.41
IFT88-202ENST00000351808 IL17RCQ8NAC3 791 aa12.51□□□□□ -0.41
IFT88-202ENST00000351808 GPR156Q8NFN8 814 aa12.51□□□□□ -0.41
IFT88-202ENST00000351808 ACOT12Q8WYK0 555 aa12.51□□□□□ -0.41
IFT88-202ENST00000351808 WDR77Q9BQA1 342 aaPredicted RBP12.51□□□□□ -0.41
IFT88-202ENST00000351808 BTBD1Q9H0C5 482 aa12.51□□□□□ -0.41
IFT88-202ENST00000351808 ABCG4Q9H172 646 aa12.51□□□□□ -0.41
IFT88-202ENST00000351808 MTG2Q9H4K7 406 aa12.51□□□□□ -0.41
IFT88-202ENST00000351808 WDR26Q9H7D7 661 aa12.51□□□□□ -0.41
IFT88-202ENST00000351808 ENPP4Q9Y6X5 453 aa12.51□□□□□ -0.41
IFT88-202ENST00000351808 TMEM129A0AVI4 362 aa12.5□□□□□ -0.41
IFT88-202ENST00000351808 MOXD2PA6NHM9 499 aa12.5□□□□□ -0.41
IFT88-202ENST00000351808 TMEM200CA6NKL6 621 aa12.5□□□□□ -0.41
IFT88-202ENST00000351808 HBP1O60381 514 aa12.5□□□□□ -0.41
IFT88-202ENST00000351808 OR10H3O60404 316 aa12.5□□□□□ -0.41
IFT88-202ENST00000351808 CLDN9O95484 217 aa12.5□□□□□ -0.41
IFT88-202ENST00000351808 SRPRAP08240 638 aaKnown RBP12.5□□□□□ -0.41
IFT88-202ENST00000351808 PRPS1L1P21108 318 aa12.5□□□□□ -0.41
IFT88-202ENST00000351808 FPR3P25089 353 aa12.5□□□□□ -0.41
IFT88-202ENST00000351808 PSMA6P60900 246 aaKnown RBP12.5□□□□□ -0.41
IFT88-202ENST00000351808 TAP2Q03519 686 aa12.5□□□□□ -0.41
IFT88-202ENST00000351808 SRSF11Q05519 484 aaKnown RBP12.5□□□□□ -0.41
IFT88-202ENST00000351808 UBXN2BQ14CS0 331 aa12.5□□□□□ -0.41
IFT88-202ENST00000351808 TRAM2Q15035 370 aa12.5□□□□□ -0.41
IFT88-202ENST00000351808 KCNA10Q16322 511 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms