RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 EFCAB10A6NFE3 127 aa15.65■□□□□ 0.1
SAMM50-201ENST00000350028 SLC22A1O15245 554 aa15.65■□□□□ 0.1
SAMM50-201ENST00000350028 MAN1A2O60476 641 aa15.65■□□□□ 0.1
SAMM50-201ENST00000350028 DNAJB6O75190 326 aa15.65■□□□□ 0.1
SAMM50-201ENST00000350028 NME6O75414 186 aaPredicted RBP15.65■□□□□ 0.1
SAMM50-201ENST00000350028 PRKAR1BP31321 381 aa15.65■□□□□ 0.1
SAMM50-201ENST00000350028 BNIP3Q12983 259 aa15.65■□□□□ 0.1
SAMM50-201ENST00000350028 AQP6Q13520 282 aa15.65■□□□□ 0.1
SAMM50-201ENST00000350028 C1orf61Q13536 156 aa15.65■□□□□ 0.1
SAMM50-201ENST00000350028 MOGQ16653 247 aa15.65■□□□□ 0.1
SAMM50-201ENST00000350028 TMEM236Q5W0B7 351 aa15.65■□□□□ 0.1
SAMM50-201ENST00000350028 P2RY8Q86VZ1 359 aa15.65■□□□□ 0.1
SAMM50-201ENST00000350028 SFTPA2Q8IWL1 248 aa15.65■□□□□ 0.1
SAMM50-201ENST00000350028 GJD3Q8N144 294 aa15.65■□□□□ 0.1
SAMM50-201ENST00000350028 STX19Q8N4C7 294 aa15.65■□□□□ 0.1
SAMM50-201ENST00000350028 CSNK1A1LQ8N752 337 aa15.65■□□□□ 0.1
SAMM50-201ENST00000350028 SEMA6CQ9H3T2 930 aa15.65■□□□□ 0.1
SAMM50-201ENST00000350028 ANKRA2Q9H9E1 313 aa15.65■□□□□ 0.1
SAMM50-201ENST00000350028 KLHL28Q9NXS3 571 aa15.65■□□□□ 0.1
SAMM50-201ENST00000350028 CNOT2Q9NZN8 540 aaKnown RBP15.65■□□□□ 0.1
SAMM50-201ENST00000350028 MRPS2Q9Y399 296 aaKnown RBP15.65■□□□□ 0.1
SAMM50-201ENST00000350028 IGHV1OR15-9A0A0B4J2B8 117 aa15.64■□□□□ 0.09
SAMM50-201ENST00000350028 TLR4O00206 839 aa15.64■□□□□ 0.09
SAMM50-201ENST00000350028 GALR3O60755 368 aaPredicted RBP15.64■□□□□ 0.09
SAMM50-201ENST00000350028 ZBTB11O95625 1053 aaPredicted RBP15.64■□□□□ 0.09
SAMM50-201ENST00000350028 IFI6P09912 130 aa15.64■□□□□ 0.09
SAMM50-201ENST00000350028 SNRPGP62308 76 aaKnown RBP15.64■□□□□ 0.09
SAMM50-201ENST00000350028 TARDBPQ13148 414 aaKnown RBP eCLIP15.64■□□□□ 0.09
SAMM50-201ENST00000350028 SPCS2Q15005 226 aa15.64■□□□□ 0.09
SAMM50-201ENST00000350028 C12orf73Q69YU5 71 aa15.64■□□□□ 0.09
SAMM50-201ENST00000350028 FAM111BQ6SJ93 734 aa15.64■□□□□ 0.09
SAMM50-201ENST00000350028 OR4N5Q8IXE1 308 aa15.64■□□□□ 0.09
SAMM50-201ENST00000350028 NLGN4XQ8N0W4 816 aa15.64■□□□□ 0.09
SAMM50-201ENST00000350028 ZNF687Q8N1G0 1237 aa15.64■□□□□ 0.09
SAMM50-201ENST00000350028 AVL9Q8NBF6 648 aa15.64■□□□□ 0.09
SAMM50-201ENST00000350028 C9orf43Q8TAL5 461 aaPredicted RBP15.64■□□□□ 0.09
SAMM50-201ENST00000350028 TRUB1Q8WWH5 349 aaKnown RBP15.64■□□□□ 0.09
SAMM50-201ENST00000350028 TANKQ92844 425 aa15.64■□□□□ 0.09
SAMM50-201ENST00000350028 CRELD1Q96HD1 420 aa15.64■□□□□ 0.09
SAMM50-201ENST00000350028 SLC6A18Q96N87 628 aa15.64■□□□□ 0.09
SAMM50-201ENST00000350028 ITPAQ9BY32 194 aa15.64■□□□□ 0.09
SAMM50-201ENST00000350028 MTHFD2LQ9H903 347 aaPredicted RBP15.64■□□□□ 0.09
SAMM50-201ENST00000350028 IL21RQ9HBE5 538 aa15.64■□□□□ 0.09
SAMM50-201ENST00000350028 POMT2Q9UKY4 750 aa15.64■□□□□ 0.09
SAMM50-201ENST00000350028 C19orf53Q9UNZ5 99 aaPredicted RBP15.64■□□□□ 0.09
SAMM50-201ENST00000350028 IFT52Q9Y366 437 aa15.64■□□□□ 0.09
SAMM50-201ENST00000350028 A0A087WV62 115 aa15.63■□□□□ 0.09
SAMM50-201ENST00000350028 GPR75O95800 540 aa15.63■□□□□ 0.09
SAMM50-201ENST00000350028 LCKP06239 509 aa15.63■□□□□ 0.09
SAMM50-201ENST00000350028 IFNA8P32881 189 aa15.63■□□□□ 0.09
SAMM50-201ENST00000350028 ENTPD1P49961 510 aa15.63■□□□□ 0.09
SAMM50-201ENST00000350028 NUDT6P53370 316 aa15.63■□□□□ 0.09
SAMM50-201ENST00000350028 OLR1P78380 273 aa15.63■□□□□ 0.09
SAMM50-201ENST00000350028 ARHGAP11BQ3KRB8 267 aa15.63■□□□□ 0.09
SAMM50-201ENST00000350028 LEXMQ3ZCV2 418 aa15.63■□□□□ 0.09
SAMM50-201ENST00000350028 ZNF628Q5EBL2 1059 aa15.63■□□□□ 0.09
SAMM50-201ENST00000350028 C1orf94Q6P1W5 598 aa15.63■□□□□ 0.09
SAMM50-201ENST00000350028 VRK2Q86Y07 508 aa15.63■□□□□ 0.09
SAMM50-201ENST00000350028 SLC16A11Q8NCK7 471 aa15.63■□□□□ 0.09
SAMM50-201ENST00000350028 OR4K5Q8NGD3 323 aa15.63■□□□□ 0.09
SAMM50-201ENST00000350028 OR52P1PQ8NH57 321 aa15.63■□□□□ 0.09
SAMM50-201ENST00000350028 SLC38A4Q969I6 547 aa15.63■□□□□ 0.09
SAMM50-201ENST00000350028 Q96MT0 163 aa15.63■□□□□ 0.09
SAMM50-201ENST00000350028 CCDC3Q9BQI4 270 aa15.63■□□□□ 0.09
SAMM50-201ENST00000350028 CACYBPQ9HB71 228 aaKnown RBP15.63■□□□□ 0.09
SAMM50-201ENST00000350028 AMBNQ9NP70 447 aa15.63■□□□□ 0.09
SAMM50-201ENST00000350028 MAN2C1Q9NTJ4 1040 aa15.63■□□□□ 0.09
SAMM50-201ENST00000350028 ZNF860A6NHJ4 632 aa15.63■□□□□ 0.09
SAMM50-201ENST00000350028 CLDN24A6NM45 220 aa15.63■□□□□ 0.09
SAMM50-201ENST00000350028 CYR61O00622 381 aa15.63■□□□□ 0.09
SAMM50-201ENST00000350028 CLPXO76031 633 aa15.63■□□□□ 0.09
SAMM50-201ENST00000350028 ATP1B1P05026 303 aa15.63■□□□□ 0.09
SAMM50-201ENST00000350028 STSP08842 583 aa15.63■□□□□ 0.09
SAMM50-201ENST00000350028 GSTM3P21266 225 aa15.63■□□□□ 0.09
SAMM50-201ENST00000350028 NR4A1P22736 598 aa15.63■□□□□ 0.09
SAMM50-201ENST00000350028 C21orf33P30042 268 aaPredicted RBP15.63■□□□□ 0.09
SAMM50-201ENST00000350028 PDX1P52945 283 aa15.63■□□□□ 0.09
SAMM50-201ENST00000350028 EMP3P54852 163 aa15.63■□□□□ 0.09
SAMM50-201ENST00000350028 VSX2P58304 361 aaPredicted RBP15.63■□□□□ 0.09
SAMM50-201ENST00000350028 TRAM2Q15035 370 aa15.63■□□□□ 0.09
SAMM50-201ENST00000350028 INAVAQ3KP66 663 aa15.63■□□□□ 0.09
SAMM50-201ENST00000350028 FHL5Q5TD97 284 aa15.63■□□□□ 0.09
SAMM50-201ENST00000350028 HMGN2P46Q86SG4 172 aa15.63■□□□□ 0.09
SAMM50-201ENST00000350028 CA13Q8N1Q1 262 aa15.63■□□□□ 0.09
SAMM50-201ENST00000350028 MORN4Q8NDC4 146 aa15.63■□□□□ 0.09
SAMM50-201ENST00000350028 RLN3Q8WXF3 142 aa15.63■□□□□ 0.09
SAMM50-201ENST00000350028 SLC9A6Q92581 669 aa15.63■□□□□ 0.09
SAMM50-201ENST00000350028 CDS1Q92903 461 aa15.63■□□□□ 0.09
SAMM50-201ENST00000350028 LRRC61Q9BV99 259 aa15.63■□□□□ 0.09
SAMM50-201ENST00000350028 QRSL1Q9H0R6 528 aaKnown RBP15.63■□□□□ 0.09
SAMM50-201ENST00000350028 PIGUQ9H490 435 aa15.63■□□□□ 0.09
SAMM50-201ENST00000350028 ANKRD19PQ9H560 264 aa15.63■□□□□ 0.09
SAMM50-201ENST00000350028 PRDM6Q9NQX0 595 aa15.63■□□□□ 0.09
SAMM50-201ENST00000350028 TMEM74BQ9NUR3 256 aa15.63■□□□□ 0.09
SAMM50-201ENST00000350028 C2orf42Q9NWW7 574 aa15.63■□□□□ 0.09
SAMM50-201ENST00000350028 GPR83Q9NYM4 423 aa15.63■□□□□ 0.09
SAMM50-201ENST00000350028 ZNF232Q9UNY5 417 aa15.63■□□□□ 0.09
SAMM50-201ENST00000350028 B4DGG1 531 aa15.62■□□□□ 0.09
SAMM50-201ENST00000350028 H3BN98 237 aa15.62■□□□□ 0.09
SAMM50-201ENST00000350028 TYRP1P17643 537 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms