RNA–Protein interactions for RNA: ENST00000349124.2

PTP4A3-202, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 1 (best) BASIC

Gene PTP4A3, Length 2,710 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-202ENST00000349124 MYL12AP19105 171 aa17.01■□□□□ 0.31
PTP4A3-202ENST00000349124 CXCR2P25025 360 aa17.01■□□□□ 0.31
PTP4A3-202ENST00000349124 TRHRP34981 398 aaPredicted RBP17.01■□□□□ 0.31
PTP4A3-202ENST00000349124 WASP42768 502 aa17.01■□□□□ 0.31
PTP4A3-202ENST00000349124 KIR2DL3P43628 341 aa17.01■□□□□ 0.31
PTP4A3-202ENST00000349124 SNRPNP63162 240 aaKnown RBP17.01■□□□□ 0.31
PTP4A3-202ENST00000349124 CDK3Q00526 305 aa17.01■□□□□ 0.31
PTP4A3-202ENST00000349124 ALDH6A1Q02252 535 aaKnown RBP17.01■□□□□ 0.31
PTP4A3-202ENST00000349124 CHRNEQ04844 493 aa17.01■□□□□ 0.31
PTP4A3-202ENST00000349124 SCN1BQ07699 218 aa17.01■□□□□ 0.31
PTP4A3-202ENST00000349124 PDZK1Q5T2W1 519 aa17.01■□□□□ 0.31
PTP4A3-202ENST00000349124 SLC30A6Q6NXT4 461 aa17.01■□□□□ 0.31
PTP4A3-202ENST00000349124 ZNF765Q7L2R6 523 aa17.01■□□□□ 0.31
PTP4A3-202ENST00000349124 LRRTM4Q86VH4 590 aa17.01■□□□□ 0.31
PTP4A3-202ENST00000349124 TMIEQ8NEW7 156 aa17.01■□□□□ 0.31
PTP4A3-202ENST00000349124 SUN3Q8TAQ9 357 aa17.01■□□□□ 0.31
PTP4A3-202ENST00000349124 INSM2Q96T92 566 aaPredicted RBP17.01■□□□□ 0.31
PTP4A3-202ENST00000349124 CFHR5Q9BXR6 569 aa17.01■□□□□ 0.31
PTP4A3-202ENST00000349124 C6orf106Q9H6K1 298 aaPredicted RBP17.01■□□□□ 0.31
PTP4A3-202ENST00000349124 IMP3Q9NV31 184 aaKnown RBP17.01■□□□□ 0.31
PTP4A3-202ENST00000349124 CXXC1Q9P0U4 656 aaPredicted RBP17.01■□□□□ 0.31
PTP4A3-202ENST00000349124 MAN2B1O00754 1011 aa17.01■□□□□ 0.31
PTP4A3-202ENST00000349124 PPP2R1BP30154 601 aa17.01■□□□□ 0.31
PTP4A3-202ENST00000349124 BCL6P41182 706 aa17.01■□□□□ 0.31
PTP4A3-202ENST00000349124 RAB8AP61006 207 aa17.01■□□□□ 0.31
PTP4A3-202ENST00000349124 HTRA3P83110 453 aa17.01■□□□□ 0.31
PTP4A3-202ENST00000349124 BNC1Q01954 994 aa17.01■□□□□ 0.31
PTP4A3-202ENST00000349124 COX10Q12887 443 aa17.01■□□□□ 0.31
PTP4A3-202ENST00000349124 ELAVL3Q14576 367 aaKnown RBP17.01■□□□□ 0.31
PTP4A3-202ENST00000349124 P2RY14Q15391 338 aa17.01■□□□□ 0.31
PTP4A3-202ENST00000349124 FAM214AQ32MH5 1076 aa17.01■□□□□ 0.31
PTP4A3-202ENST00000349124 PLK5Q496M5 336 aa17.01■□□□□ 0.31
PTP4A3-202ENST00000349124 PAMR1Q6UXH9 720 aa17.01■□□□□ 0.31
PTP4A3-202ENST00000349124 ETFBKMTQ8IXQ9 262 aa17.01■□□□□ 0.31
PTP4A3-202ENST00000349124 ANKK1Q8NFD2 765 aa17.01■□□□□ 0.31
PTP4A3-202ENST00000349124 UBASH3BQ8TF42 649 aa17.01■□□□□ 0.31
PTP4A3-202ENST00000349124 RASSF5Q8WWW0 418 aa17.01■□□□□ 0.31
PTP4A3-202ENST00000349124 ARMC5Q96C12 935 aa17.01■□□□□ 0.31
PTP4A3-202ENST00000349124 C12orf66Q96MD2 445 aa17.01■□□□□ 0.31
PTP4A3-202ENST00000349124 KCTD7Q96MP8 289 aa17.01■□□□□ 0.31
PTP4A3-202ENST00000349124 QRFPRQ96P65 431 aa17.01■□□□□ 0.31
PTP4A3-202ENST00000349124 MCOLN1Q9GZU1 580 aa17.01■□□□□ 0.31
PTP4A3-202ENST00000349124 SEMA4GQ9NTN9 838 aa17.01■□□□□ 0.31
PTP4A3-202ENST00000349124 PAQR5Q9NXK6 330 aaPredicted RBP17.01■□□□□ 0.31
PTP4A3-202ENST00000349124 NDRG2Q9UN36 371 aaKnown RBP17.01■□□□□ 0.31
PTP4A3-202ENST00000349124 KCNK6Q9Y257 313 aa17.01■□□□□ 0.31
PTP4A3-202ENST00000349124 CHST2Q9Y4C5 530 aa17.01■□□□□ 0.31
PTP4A3-202ENST00000349124 SZT2Q5T011 3432 aa17■□□□□ 0.31
PTP4A3-202ENST00000349124 OR52A4PA6NMU1 304 aa17■□□□□ 0.31
PTP4A3-202ENST00000349124 CENPXA8MT69 81 aa17■□□□□ 0.31
PTP4A3-202ENST00000349124 B4DXG7 233 aa17■□□□□ 0.31
PTP4A3-202ENST00000349124 ERI3O43414 337 aaKnown RBP17■□□□□ 0.31
PTP4A3-202ENST00000349124 SLC2A10O95528 541 aa17■□□□□ 0.31
PTP4A3-202ENST00000349124 S100A1P23297 94 aa17■□□□□ 0.31
PTP4A3-202ENST00000349124 MTNR1AP48039 350 aa17■□□□□ 0.31
PTP4A3-202ENST00000349124 SMSP52788 366 aa17■□□□□ 0.31
PTP4A3-202ENST00000349124 CD83Q01151 205 aa17■□□□□ 0.31
PTP4A3-202ENST00000349124 Q5BKY6 102 aa17■□□□□ 0.31
PTP4A3-202ENST00000349124 ENTPD8Q5MY95 495 aa17■□□□□ 0.31
PTP4A3-202ENST00000349124 PIP5KL1Q5T9C9 394 aa17■□□□□ 0.31
PTP4A3-202ENST00000349124 BBS1Q8NFJ9 593 aa17■□□□□ 0.31
PTP4A3-202ENST00000349124 OR2A1Q8NGT9 310 aa17■□□□□ 0.31
PTP4A3-202ENST00000349124 DOK4Q8TEW6 326 aa17■□□□□ 0.31
PTP4A3-202ENST00000349124 OTUB2Q96DC9 234 aa17■□□□□ 0.31
PTP4A3-202ENST00000349124 PPP1R16AQ96I34 528 aa17■□□□□ 0.31
PTP4A3-202ENST00000349124 SLX1AQ9BQ83 275 aa17■□□□□ 0.31
PTP4A3-202ENST00000349124 TMED9Q9BVK6 235 aa17■□□□□ 0.31
PTP4A3-202ENST00000349124 TBC1D17Q9HA65 648 aa17■□□□□ 0.31
PTP4A3-202ENST00000349124 GRIP1Q9Y3R0 1128 aa17■□□□□ 0.31
PTP4A3-202ENST00000349124 FAM170BA6NMN3 283 aa17■□□□□ 0.31
PTP4A3-202ENST00000349124 NARSO43776 548 aaKnown RBP17■□□□□ 0.31
PTP4A3-202ENST00000349124 FCMRO60667 390 aa17■□□□□ 0.31
PTP4A3-202ENST00000349124 EIF2S1P05198 315 aaKnown RBP17■□□□□ 0.31
PTP4A3-202ENST00000349124 NR2F6P10588 404 aa17■□□□□ 0.31
PTP4A3-202ENST00000349124 AVPR1BP47901 424 aa17■□□□□ 0.31
PTP4A3-202ENST00000349124 SLC9A3P48764 834 aa17■□□□□ 0.31
PTP4A3-202ENST00000349124 TAS2R38P59533 333 aa17■□□□□ 0.31
PTP4A3-202ENST00000349124 TAS2R41P59536 307 aa17■□□□□ 0.31
PTP4A3-202ENST00000349124 GAB4Q2WGN9 574 aa17■□□□□ 0.31
PTP4A3-202ENST00000349124 RNLSQ5VYX0 342 aa17■□□□□ 0.31
PTP4A3-202ENST00000349124 CD300LDQ6UXZ3 194 aa17■□□□□ 0.31
PTP4A3-202ENST00000349124 NKAIN4Q8IVV8 208 aa17■□□□□ 0.31
PTP4A3-202ENST00000349124 SIMC1Q8NDZ2 872 aa17■□□□□ 0.31
PTP4A3-202ENST00000349124 TMEM163Q8TC26 289 aa17■□□□□ 0.31
PTP4A3-202ENST00000349124 ZFPM2Q8WW38 1151 aa17■□□□□ 0.31
PTP4A3-202ENST00000349124 NPAP1Q9NZP6 1156 aa17■□□□□ 0.31
PTP4A3-202ENST00000349124 KIAA0100Q14667 2235 aaKnown RBP17■□□□□ 0.31
PTP4A3-202ENST00000349124 C2orf92A0A1B0GVN3 265 aa16.99■□□□□ 0.31
PTP4A3-202ENST00000349124 PRR23AA6NEV1 266 aa16.99■□□□□ 0.31
PTP4A3-202ENST00000349124 RGS13O14921 159 aa16.99■□□□□ 0.31
PTP4A3-202ENST00000349124 FGBP02675 491 aa16.99■□□□□ 0.31
PTP4A3-202ENST00000349124 ACP2P11117 423 aa16.99■□□□□ 0.31
PTP4A3-202ENST00000349124 KIAA1161Q6NSJ0 714 aa16.99■□□□□ 0.31
PTP4A3-202ENST00000349124 DTX3Q8N9I9 347 aa16.99■□□□□ 0.31
PTP4A3-202ENST00000349124 KAT2AQ92830 837 aa16.99■□□□□ 0.31
PTP4A3-202ENST00000349124 PRRC1Q96M27 445 aa16.99■□□□□ 0.31
PTP4A3-202ENST00000349124 NECTIN4Q96NY8 510 aa16.99■□□□□ 0.31
PTP4A3-202ENST00000349124 OR2B2Q9GZK3 357 aa16.99■□□□□ 0.31
PTP4A3-202ENST00000349124 TAS2R7Q9NYW3 318 aa16.99■□□□□ 0.31
PTP4A3-202ENST00000349124 DEC1Q9P2X7 70 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms