RNA–Protein interactions for RNA: ENST00000349062.6

TRIM4-201, Transcript of tripartite motif containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM4, Length 3,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-201ENST00000349062 SPNP16150 400 aa13.07□□□□□ -0.32
TRIM4-201ENST00000349062 UGT2B7P16662 529 aa13.07□□□□□ -0.32
TRIM4-201ENST00000349062 CD40LGP29965 261 aa13.07□□□□□ -0.32
TRIM4-201ENST00000349062 DESI1Q6ICB0 168 aa13.07□□□□□ -0.32
TRIM4-201ENST00000349062 TCTN3Q6NUS6 607 aa13.07□□□□□ -0.32
TRIM4-201ENST00000349062 PRSS58Q8IYP2 241 aa13.07□□□□□ -0.32
TRIM4-201ENST00000349062 OR6Q1Q8NGQ2 317 aa13.07□□□□□ -0.32
TRIM4-201ENST00000349062 RSC1A1Q92681 617 aa13.07□□□□□ -0.32
TRIM4-201ENST00000349062 RERGQ96A58 199 aaPredicted RBP13.07□□□□□ -0.32
TRIM4-201ENST00000349062 SNX7Q9UNH6 387 aa13.07□□□□□ -0.32
TRIM4-201ENST00000349062 PADI2Q9Y2J8 665 aa13.07□□□□□ -0.32
TRIM4-201ENST00000349062 PMF1-BGLAPU3KQ54 211 aa13.07□□□□□ -0.32
TRIM4-201ENST00000349062 A0A0A6YYD5 115 aa13.07□□□□□ -0.32
TRIM4-201ENST00000349062 MAN2B1O00754 1011 aa13.07□□□□□ -0.32
TRIM4-201ENST00000349062 SLC22A1O15245 554 aa13.07□□□□□ -0.32
TRIM4-201ENST00000349062 SEMA3DO95025 777 aa13.07□□□□□ -0.32
TRIM4-201ENST00000349062 NR2F6P10588 404 aa13.07□□□□□ -0.32
TRIM4-201ENST00000349062 S100A5P33763 92 aa13.07□□□□□ -0.32
TRIM4-201ENST00000349062 MPIP34949 423 aa13.07□□□□□ -0.32
TRIM4-201ENST00000349062 MAZP56270 477 aaKnown RBP13.07□□□□□ -0.32
TRIM4-201ENST00000349062 TAS2R41P59536 307 aa13.07□□□□□ -0.32
TRIM4-201ENST00000349062 STXBP1P61764 594 aaKnown RBP13.07□□□□□ -0.32
TRIM4-201ENST00000349062 RBBP4Q09028 425 aa13.07□□□□□ -0.32
TRIM4-201ENST00000349062 ZNF311Q5JNZ3 666 aa13.07□□□□□ -0.32
TRIM4-201ENST00000349062 CHRDL2Q6WN34 429 aa13.07□□□□□ -0.32
TRIM4-201ENST00000349062 VN1R4Q7Z5H5 301 aa13.07□□□□□ -0.32
TRIM4-201ENST00000349062 OR52E4Q8NGH9 312 aa13.07□□□□□ -0.32
TRIM4-201ENST00000349062 MTERF3Q96E29 417 aa13.07□□□□□ -0.32
TRIM4-201ENST00000349062 DDX31Q9H8H2 851 aaKnown RBP13.07□□□□□ -0.32
TRIM4-201ENST00000349062 NDRG4Q9ULP0 352 aaKnown RBP13.07□□□□□ -0.32
TRIM4-201ENST00000349062 IDH3BO43837 385 aa13.07□□□□□ -0.32
TRIM4-201ENST00000349062 MYF5P13349 255 aa13.07□□□□□ -0.32
TRIM4-201ENST00000349062 F3P13726 295 aa13.07□□□□□ -0.32
TRIM4-201ENST00000349062 CHMP24386 653 aa13.07□□□□□ -0.32
TRIM4-201ENST00000349062 RYKP34925 604 aa13.07□□□□□ -0.32
TRIM4-201ENST00000349062 AGERQ15109 404 aa13.07□□□□□ -0.32
TRIM4-201ENST00000349062 TRMT12Q53H54 448 aaKnown RBP13.07□□□□□ -0.32
TRIM4-201ENST00000349062 SAXO2Q658L1 398 aa13.07□□□□□ -0.32
TRIM4-201ENST00000349062 FBXO42Q6P3S6 717 aa13.07□□□□□ -0.32
TRIM4-201ENST00000349062 B3GLCTQ6Y288 498 aa13.07□□□□□ -0.32
TRIM4-201ENST00000349062 GPR155Q7Z3F1 870 aa13.07□□□□□ -0.32
TRIM4-201ENST00000349062 TSPYL5Q86VY4 417 aaPredicted RBP13.07□□□□□ -0.32
TRIM4-201ENST00000349062 UBE2J2Q8N2K1 259 aa13.07□□□□□ -0.32
TRIM4-201ENST00000349062 SLC7A13Q8TCU3 470 aa13.07□□□□□ -0.32
TRIM4-201ENST00000349062 SLC37A2Q8TED4 501 aa13.07□□□□□ -0.32
TRIM4-201ENST00000349062 APH1BQ8WW43 257 aa13.07□□□□□ -0.32
TRIM4-201ENST00000349062 PIK3R3Q92569 461 aa13.07□□□□□ -0.32
TRIM4-201ENST00000349062 EPYCQ99645 322 aa13.07□□□□□ -0.32
TRIM4-201ENST00000349062 NEK6Q9HC98 313 aa13.07□□□□□ -0.32
TRIM4-201ENST00000349062 ACTR10Q9NZ32 417 aa13.07□□□□□ -0.32
TRIM4-201ENST00000349062 PCDHGA2Q9Y5H1 932 aa13.07□□□□□ -0.32
TRIM4-201ENST00000349062 NCOR1O75376 2440 aa13.07□□□□□ -0.32
TRIM4-201ENST00000349062 TLX2O43763 284 aaPredicted RBP13.06□□□□□ -0.32
TRIM4-201ENST00000349062 GKN3PP0CG01 181 aa13.06□□□□□ -0.32
TRIM4-201ENST00000349062 ANXA8P13928 327 aa13.06□□□□□ -0.32
TRIM4-201ENST00000349062 STEAP3Q658P3 488 aa13.06□□□□□ -0.32
TRIM4-201ENST00000349062 ARMC6Q6NXE6 501 aa13.06□□□□□ -0.32
TRIM4-201ENST00000349062 SLC34A3Q8N130 599 aa13.06□□□□□ -0.32
TRIM4-201ENST00000349062 GOT1L1Q8NHS2 421 aaPredicted RBP13.06□□□□□ -0.32
TRIM4-201ENST00000349062 WDR36Q8NI36 951 aaKnown RBP13.06□□□□□ -0.32
TRIM4-201ENST00000349062 CDS1Q92903 461 aa13.06□□□□□ -0.32
TRIM4-201ENST00000349062 TMEM38AQ9H6F2 299 aa13.06□□□□□ -0.32
TRIM4-201ENST00000349062 GPR55Q9Y2T6 319 aaPredicted RBP13.06□□□□□ -0.32
TRIM4-201ENST00000349062 DNMT3AQ9Y6K1 912 aaPredicted RBP13.06□□□□□ -0.32
TRIM4-201ENST00000349062 FAM47E-STBD1D6RA91 191 aa13.06□□□□□ -0.32
TRIM4-201ENST00000349062 AIREO43918 545 aa13.06□□□□□ -0.32
TRIM4-201ENST00000349062 ITGAMP11215 1152 aa13.06□□□□□ -0.32
TRIM4-201ENST00000349062 XCR1P46094 333 aa13.06□□□□□ -0.32
TRIM4-201ENST00000349062 PCBP4P57723 403 aaKnown RBP13.06□□□□□ -0.32
TRIM4-201ENST00000349062 TGM3Q08188 693 aa13.06□□□□□ -0.32
TRIM4-201ENST00000349062 TOP3AQ13472 1001 aaPredicted RBP13.06□□□□□ -0.32
TRIM4-201ENST00000349062 VASH1Q7L8A9 365 aaPredicted RBP13.06□□□□□ -0.32
TRIM4-201ENST00000349062 CELF2-AS1Q8N7Q2 184 aa13.06□□□□□ -0.32
TRIM4-201ENST00000349062 SLC6A18Q96N87 628 aa13.06□□□□□ -0.32
TRIM4-201ENST00000349062 EHD3Q9NZN3 535 aa13.06□□□□□ -0.32
TRIM4-201ENST00000349062 HCN3Q9P1Z3 774 aa13.06□□□□□ -0.32
TRIM4-201ENST00000349062 CPNE7Q9UBL6 633 aa13.06□□□□□ -0.32
TRIM4-201ENST00000349062 ASB4Q9Y574 426 aa13.06□□□□□ -0.32
TRIM4-201ENST00000349062 H0YGG7 62 aa13.06□□□□□ -0.32
TRIM4-201ENST00000349062 AZGP1P25311 298 aaKnown RBP13.06□□□□□ -0.32
TRIM4-201ENST00000349062 LSSP48449 732 aa13.06□□□□□ -0.32
TRIM4-201ENST00000349062 HNRNPFP52597 415 aaKnown RBP13.06□□□□□ -0.32
TRIM4-201ENST00000349062 CDC42P60953 191 aa13.06□□□□□ -0.32
TRIM4-201ENST00000349062 ARF3P61204 181 aaPredicted RBP13.06□□□□□ -0.32
TRIM4-201ENST00000349062 SLC35A2P78381 396 aa13.06□□□□□ -0.32
TRIM4-201ENST00000349062 MAT1AQ00266 395 aaKnown RBP13.06□□□□□ -0.32
TRIM4-201ENST00000349062 EEF1A2Q05639 463 aaKnown RBP13.06□□□□□ -0.32
TRIM4-201ENST00000349062 CASP12Q6UXS9 341 aa13.06□□□□□ -0.32
TRIM4-201ENST00000349062 SIX5Q8N196 739 aa13.06□□□□□ -0.32
TRIM4-201ENST00000349062 TMEM203Q969S6 136 aa13.06□□□□□ -0.32
TRIM4-201ENST00000349062 CEP19Q96LK0 163 aa13.06□□□□□ -0.32
TRIM4-201ENST00000349062 OR7D2Q96RA2 312 aa13.06□□□□□ -0.32
TRIM4-201ENST00000349062 GABRG3Q99928 467 aa13.06□□□□□ -0.32
TRIM4-201ENST00000349062 RAB11FIP5Q9BXF6 653 aa13.06□□□□□ -0.32
TRIM4-201ENST00000349062 KIR3DX1Q9H7L2 352 aa13.06□□□□□ -0.32
TRIM4-201ENST00000349062 POFUT2Q9Y2G5 429 aa13.06□□□□□ -0.32
TRIM4-201ENST00000349062 NUP210Q8TEM1 1887 aaPredicted RBP13.06□□□□□ -0.32
TRIM4-201ENST00000349062 KIAA1549LQ6ZVL6 1849 aa13.05□□□□□ -0.32
TRIM4-201ENST00000349062 SEMG1P04279 462 aa13.05□□□□□ -0.32
TRIM4-201ENST00000349062 POU2F2P09086 479 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms