RNA–Protein interactions for RNA: ENST00000347849.7

PTPN18-202, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 1 (best) BASIC

Gene PTPN18, Length 2,472 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-202ENST00000347849 CDK6Q00534 326 aa20.05■□□□□ 0.8
PTPN18-202ENST00000347849 NUDT13Q86X67 352 aa20.05■□□□□ 0.8
PTPN18-202ENST00000347849 WDR92Q96MX6 357 aa20.05■□□□□ 0.8
PTPN18-202ENST00000347849 NMNAT1Q9HAN9 279 aaPredicted RBP20.05■□□□□ 0.8
PTPN18-202ENST00000347849 MPZL2O60487 215 aa20.04■□□□□ 0.8
PTPN18-202ENST00000347849 PSMA1P25786 263 aaKnown RBP20.04■□□□□ 0.8
PTPN18-202ENST00000347849 LIMS1P48059 325 aa20.04■□□□□ 0.8
PTPN18-202ENST00000347849 HMGA2P52926 109 aa20.04■□□□□ 0.8
PTPN18-202ENST00000347849 KHDRBS1Q07666 443 aaKnown RBP eCLIP20.04■□□□□ 0.8
PTPN18-202ENST00000347849 HSPB3Q12988 150 aa20.04■□□□□ 0.8
PTPN18-202ENST00000347849 OR4C11Q6IEV9 310 aa20.04■□□□□ 0.8
PTPN18-202ENST00000347849 FAM46DQ8NEK8 389 aa20.04■□□□□ 0.8
PTPN18-202ENST00000347849 GEMIN6Q8WXD5 167 aaKnown RBP20.04■□□□□ 0.8
PTPN18-202ENST00000347849 ASB12Q8WXK4 309 aa20.04■□□□□ 0.8
PTPN18-202ENST00000347849 C6orf106Q9H6K1 298 aaPredicted RBP20.04■□□□□ 0.8
PTPN18-202ENST00000347849 KNL1Q8NG31 2342 aa20.04■□□□□ 0.8
PTPN18-202ENST00000347849 TRBC2A0A5B9 178 aa20.04■□□□□ 0.8
PTPN18-202ENST00000347849 ISM1B1AKI9 464 aa20.04■□□□□ 0.8
PTPN18-202ENST00000347849 BTN3A3O00478 584 aa20.04■□□□□ 0.8
PTPN18-202ENST00000347849 KCNJ13O60928 360 aa20.04■□□□□ 0.8
PTPN18-202ENST00000347849 CRYBB2P43320 205 aa20.04■□□□□ 0.8
PTPN18-202ENST00000347849 EEF1A2Q05639 463 aaKnown RBP20.04■□□□□ 0.8
PTPN18-202ENST00000347849 RUNX1T1Q06455 604 aa20.04■□□□□ 0.8
PTPN18-202ENST00000347849 LRRC74AQ0VAA2 488 aa20.04■□□□□ 0.8
PTPN18-202ENST00000347849 CAMK2BQ13554 666 aa20.04■□□□□ 0.8
PTPN18-202ENST00000347849 SPHARQ15513 63 aa20.04■□□□□ 0.8
PTPN18-202ENST00000347849 TRIM69Q86WT6 500 aa20.04■□□□□ 0.8
PTPN18-202ENST00000347849 TAGAPQ8N103 731 aa20.04■□□□□ 0.8
PTPN18-202ENST00000347849 PATE1Q8WXA2 126 aa20.04■□□□□ 0.8
PTPN18-202ENST00000347849 FAM3CQ92520 227 aa20.04■□□□□ 0.8
PTPN18-202ENST00000347849 SRRQ9GZT4 340 aa20.04■□□□□ 0.8
PTPN18-202ENST00000347849 DDX31Q9H8H2 851 aaKnown RBP20.04■□□□□ 0.8
PTPN18-202ENST00000347849 MMP17Q9ULZ9 603 aa20.04■□□□□ 0.8
PTPN18-202ENST00000347849 A0A0A6YYD5 115 aa20.03■□□□□ 0.8
PTPN18-202ENST00000347849 HMX3A6NHT5 357 aa20.03■□□□□ 0.8
PTPN18-202ENST00000347849 CSO75390 466 aaKnown RBP20.03■□□□□ 0.8
PTPN18-202ENST00000347849 CLEC3AO75596 197 aa20.03■□□□□ 0.8
PTPN18-202ENST00000347849 IGFBP1P08833 259 aaPredicted RBP20.03■□□□□ 0.8
PTPN18-202ENST00000347849 ZIC1Q15915 447 aa20.03■□□□□ 0.8
PTPN18-202ENST00000347849 ALG11Q2TAA5 492 aa20.03■□□□□ 0.8
PTPN18-202ENST00000347849 AMIGO1Q86WK6 493 aa20.03■□□□□ 0.8
PTPN18-202ENST00000347849 OR8K5Q8NH50 307 aa20.03■□□□□ 0.8
PTPN18-202ENST00000347849 LCN9Q8WX39 176 aa20.03■□□□□ 0.8
PTPN18-202ENST00000347849 FYTTD1Q96QD9 318 aaKnown RBP20.03■□□□□ 0.8
PTPN18-202ENST00000347849 BEX2Q9BXY8 128 aa20.03■□□□□ 0.8
PTPN18-202ENST00000347849 TCEAL2Q9H3H9 227 aaPredicted RBP20.03■□□□□ 0.8
PTPN18-202ENST00000347849 RANGRFQ9HD47 186 aaPredicted RBP20.03■□□□□ 0.8
PTPN18-202ENST00000347849 DNAJC27Q9NZQ0 273 aa20.03■□□□□ 0.8
PTPN18-202ENST00000347849 NUFIP1Q9UHK0 495 aaKnown RBP20.03■□□□□ 0.8
PTPN18-202ENST00000347849 SLCO1B1Q9Y6L6 691 aa20.03■□□□□ 0.8
PTPN18-202ENST00000347849 NOTOA8MTQ0 251 aa20.03■□□□□ 0.8
PTPN18-202ENST00000347849 CSTF2P33240 577 aaKnown RBP eCLIP20.03■□□□□ 0.8
PTPN18-202ENST00000347849 SSR2P43308 183 aa20.03■□□□□ 0.8
PTPN18-202ENST00000347849 MANFP55145 182 aaKnown RBP20.03■□□□□ 0.8
PTPN18-202ENST00000347849 PSPHP78330 225 aa20.03■□□□□ 0.8
PTPN18-202ENST00000347849 ZNF542PQ5EBM4 170 aa20.03■□□□□ 0.8
PTPN18-202ENST00000347849 EOGTQ5NDL2 527 aa20.03■□□□□ 0.8
PTPN18-202ENST00000347849 SNAP47Q5SQN1 464 aa20.03■□□□□ 0.8
PTPN18-202ENST00000347849 PRR23CQ6ZRP0 262 aa20.03■□□□□ 0.8
PTPN18-202ENST00000347849 NRROSQ86YC3 692 aa20.03■□□□□ 0.8
PTPN18-202ENST00000347849 UBE2J2Q8N2K1 259 aa20.03■□□□□ 0.8
PTPN18-202ENST00000347849 ENPP4Q9Y6X5 453 aa20.03■□□□□ 0.8
PTPN18-202ENST00000347849 A0A1W2PS29 197 aa20.02■□□□□ 0.8
PTPN18-202ENST00000347849 SOX14O95416 240 aa20.02■□□□□ 0.8
PTPN18-202ENST00000347849 CHRM5P08912 532 aaPredicted RBP20.02■□□□□ 0.8
PTPN18-202ENST00000347849 HOXC4P09017 264 aaPredicted RBP20.02■□□□□ 0.8
PTPN18-202ENST00000347849 PCBP4P57723 403 aaKnown RBP20.02■□□□□ 0.8
PTPN18-202ENST00000347849 RHAGQ02094 409 aa20.02■□□□□ 0.8
PTPN18-202ENST00000347849 RBBP4Q09028 425 aa20.02■□□□□ 0.8
PTPN18-202ENST00000347849 MADCAM1Q13477 382 aa20.02■□□□□ 0.8
PTPN18-202ENST00000347849 HEPACAMQ14CZ8 416 aa20.02■□□□□ 0.8
PTPN18-202ENST00000347849 DUSP7Q16829 419 aa20.02■□□□□ 0.8
PTPN18-202ENST00000347849 FAM131AQ6UXB0 335 aa20.02■□□□□ 0.8
PTPN18-202ENST00000347849 BCDIN3DQ7Z5W3 292 aaKnown RBP20.02■□□□□ 0.8
PTPN18-202ENST00000347849 SLC22A18ASQ8N1D0 253 aa20.02■□□□□ 0.8
PTPN18-202ENST00000347849 MS4A6EQ96DS6 147 aa20.02■□□□□ 0.8
PTPN18-202ENST00000347849 RAB11FIP5Q9BXF6 653 aa20.02■□□□□ 0.8
PTPN18-202ENST00000347849 POLR2J2Q9GZM3 115 aaKnown RBP20.02■□□□□ 0.8
PTPN18-202ENST00000347849 RERGLQ9H628 205 aa20.02■□□□□ 0.8
PTPN18-202ENST00000347849 KIR3DX1Q9H7L2 352 aa20.02■□□□□ 0.8
PTPN18-202ENST00000347849 SLC25A19Q9HC21 320 aa20.02■□□□□ 0.8
PTPN18-202ENST00000347849 SIRT3Q9NTG7 399 aaPredicted RBP20.02■□□□□ 0.8
PTPN18-202ENST00000347849 ENOPH1Q9UHY7 261 aa20.02■□□□□ 0.8
PTPN18-202ENST00000347849 TLR4O00206 839 aa20.02■□□□□ 0.8
PTPN18-202ENST00000347849 PDPK1O15530 556 aa20.02■□□□□ 0.8
PTPN18-202ENST00000347849 ERI3O43414 337 aaKnown RBP20.02■□□□□ 0.8
PTPN18-202ENST00000347849 FHP07954 510 aa20.02■□□□□ 0.8
PTPN18-202ENST00000347849 BMP8BP34820 402 aa20.02■□□□□ 0.8
PTPN18-202ENST00000347849 RAB8AP61006 207 aa20.02■□□□□ 0.8
PTPN18-202ENST00000347849 SCN1BQ07699 218 aa20.02■□□□□ 0.8
PTPN18-202ENST00000347849 ZNF750Q32MQ0 723 aa20.02■□□□□ 0.8
PTPN18-202ENST00000347849 TNFAIP8L2Q6P589 184 aaPredicted RBP20.02■□□□□ 0.8
PTPN18-202ENST00000347849 TRIM40Q6P9F5 258 aa20.02■□□□□ 0.8
PTPN18-202ENST00000347849 Q6ZSR6 202 aa20.02■□□□□ 0.8
PTPN18-202ENST00000347849 OR13H1Q8NG92 308 aa20.02■□□□□ 0.8
PTPN18-202ENST00000347849 RSPO3Q9BXY4 272 aaPredicted RBP20.02■□□□□ 0.8
PTPN18-202ENST00000347849 PITHD1Q9GZP4 211 aaPredicted RBP20.02■□□□□ 0.8
PTPN18-202ENST00000347849 LSM2Q9Y333 95 aaKnown RBP20.02■□□□□ 0.8
PTPN18-202ENST00000347849 CMAHPQ9Y471 501 aa20.02■□□□□ 0.8
PTPN18-202ENST00000347849 GON4LQ3T8J9 2241 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms