RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 RAB40BQ12829 278 aa18.49■□□□□ 0.55
HDAC4-201ENST00000345617 CYS1Q717R9 158 aa18.49■□□□□ 0.55
HDAC4-201ENST00000345617 MAN2C1Q9NTJ4 1040 aa18.49■□□□□ 0.55
HDAC4-201ENST00000345617 ROBO1Q9Y6N7 1651 aa18.49■□□□□ 0.55
HDAC4-201ENST00000345617 PIP5K1CO60331 668 aa18.49■□□□□ 0.55
HDAC4-201ENST00000345617 LYSMD3Q7Z3D4 306 aa18.49■□□□□ 0.55
HDAC4-201ENST00000345617 KLBQ86Z14 1044 aa18.49■□□□□ 0.55
HDAC4-201ENST00000345617 TMEM151AQ8N4L1 468 aa18.49■□□□□ 0.55
HDAC4-201ENST00000345617 NETO2Q8NC67 525 aa18.49■□□□□ 0.55
HDAC4-201ENST00000345617 SPTSSAQ969W0 71 aa18.49■□□□□ 0.55
HDAC4-201ENST00000345617 WDR6Q9NNW5 1121 aaKnown RBP18.49■□□□□ 0.55
HDAC4-201ENST00000345617 NEMP2A6NFY4 417 aa18.48■□□□□ 0.55
HDAC4-201ENST00000345617 SOX1O00570 391 aaPredicted RBP18.48■□□□□ 0.55
HDAC4-201ENST00000345617 LCMT2O60294 686 aaKnown RBP18.48■□□□□ 0.55
HDAC4-201ENST00000345617 CST3P01034 146 aaPredicted RBP18.48■□□□□ 0.55
HDAC4-201ENST00000345617 TSSK4Q6SA08 328 aa18.48■□□□□ 0.55
HDAC4-201ENST00000345617 LRRC25Q8N386 305 aaPredicted RBP18.48■□□□□ 0.55
HDAC4-201ENST00000345617 TTC24A2A3L6 582 aaPredicted RBP18.48■□□□□ 0.55
HDAC4-201ENST00000345617 CLIC3O95833 236 aa18.48■□□□□ 0.55
HDAC4-201ENST00000345617 NUDT1P36639 197 aa18.48■□□□□ 0.55
HDAC4-201ENST00000345617 CRYZQ08257 329 aaKnown RBP18.48■□□□□ 0.55
HDAC4-201ENST00000345617 TMEM41BQ5BJD5 291 aa18.48■□□□□ 0.55
HDAC4-201ENST00000345617 TREML1Q86YW5 311 aa18.48■□□□□ 0.55
HDAC4-201ENST00000345617 TICAM1Q8IUC6 712 aa18.48■□□□□ 0.55
HDAC4-201ENST00000345617 KDM1BQ8NB78 822 aa18.48■□□□□ 0.55
HDAC4-201ENST00000345617 NANPQ8TBE9 248 aa18.48■□□□□ 0.55
HDAC4-201ENST00000345617 SIX2Q9NPC8 291 aa18.48■□□□□ 0.55
HDAC4-201ENST00000345617 C2orf42Q9NWW7 574 aa18.48■□□□□ 0.55
HDAC4-201ENST00000345617 EMC8O43402 210 aa18.48■□□□□ 0.55
HDAC4-201ENST00000345617 OPRL1P41146 370 aa18.48■□□□□ 0.55
HDAC4-201ENST00000345617 RPS13P62277 151 aaKnown RBP18.48■□□□□ 0.55
HDAC4-201ENST00000345617 EIF2B1Q14232 305 aaKnown RBP18.48■□□□□ 0.55
HDAC4-201ENST00000345617 OR6T1Q8NGN1 323 aa18.48■□□□□ 0.55
HDAC4-201ENST00000345617 RNF208Q9H0X6 261 aa18.48■□□□□ 0.55
HDAC4-201ENST00000345617 WDPCPO95876 746 aa18.48■□□□□ 0.55
HDAC4-201ENST00000345617 FBXO22Q8NEZ5 403 aa18.48■□□□□ 0.55
HDAC4-201ENST00000345617 HSD3B7Q9H2F3 369 aa18.48■□□□□ 0.55
HDAC4-201ENST00000345617 MRPL3P09001 348 aaKnown RBP18.48■□□□□ 0.55
HDAC4-201ENST00000345617 GBX1Q14549 363 aa18.48■□□□□ 0.55
HDAC4-201ENST00000345617 DESI1Q6ICB0 168 aa18.48■□□□□ 0.55
HDAC4-201ENST00000345617 LINC00299Q6ZSB3 139 aa18.48■□□□□ 0.55
HDAC4-201ENST00000345617 OR56B4Q8NH76 319 aa18.48■□□□□ 0.55
HDAC4-201ENST00000345617 RANBP9Q96S59 729 aa18.48■□□□□ 0.55
HDAC4-201ENST00000345617 GPR83Q9NYM4 423 aa18.48■□□□□ 0.55
HDAC4-201ENST00000345617 RNF11Q9Y3C5 154 aa18.48■□□□□ 0.55
HDAC4-201ENST00000345617 BTBD17A6NE02 478 aa18.48■□□□□ 0.55
HDAC4-201ENST00000345617 RNF212BA8MTL3 300 aa18.48■□□□□ 0.55
HDAC4-201ENST00000345617 BHLHE40O14503 412 aa18.48■□□□□ 0.55
HDAC4-201ENST00000345617 BRINP1O60477 761 aa18.48■□□□□ 0.55
HDAC4-201ENST00000345617 AGPAT4Q9NRZ5 378 aa18.48■□□□□ 0.55
HDAC4-201ENST00000345617 TMEM248Q9NWD8 314 aa18.48■□□□□ 0.55
HDAC4-201ENST00000345617 AKAP6Q13023 2319 aa18.48■□□□□ 0.55
HDAC4-201ENST00000345617 CLEC3AO75596 197 aa18.48■□□□□ 0.55
HDAC4-201ENST00000345617 SERPINF1P36955 418 aa18.48■□□□□ 0.55
HDAC4-201ENST00000345617 RPL23AP62750 156 aaKnown RBP18.48■□□□□ 0.55
HDAC4-201ENST00000345617 SRPXP78539 464 aa18.48■□□□□ 0.55
HDAC4-201ENST00000345617 ASRGL1Q7L266 308 aa18.48■□□□□ 0.55
HDAC4-201ENST00000345617 CHTF18Q8WVB6 975 aa18.48■□□□□ 0.55
HDAC4-201ENST00000345617 RNF32Q9H0A6 362 aa18.48■□□□□ 0.55
HDAC4-201ENST00000345617 GALPQ9UBC7 116 aa18.48■□□□□ 0.55
HDAC4-201ENST00000345617 MEIOCA2RUB1 952 aa18.47■□□□□ 0.55
HDAC4-201ENST00000345617 DIRAS1O95057 198 aa18.47■□□□□ 0.55
HDAC4-201ENST00000345617 SCGB1D1O95968 90 aa18.47■□□□□ 0.55
HDAC4-201ENST00000345617 PTPN2P17706 415 aa18.47■□□□□ 0.55
HDAC4-201ENST00000345617 ERVK-16P61578 105 aa18.47■□□□□ 0.55
HDAC4-201ENST00000345617 SELPLGQ14242 412 aa18.47■□□□□ 0.55
HDAC4-201ENST00000345617 FAM83FQ8NEG4 500 aaPredicted RBP18.47■□□□□ 0.55
HDAC4-201ENST00000345617 SLC25A44Q96H78 314 aaPredicted RBP18.47■□□□□ 0.55
HDAC4-201ENST00000345617 LDAHQ9H6V9 325 aa18.47■□□□□ 0.55
HDAC4-201ENST00000345617 PLCXD1Q9NUJ7 323 aa18.47■□□□□ 0.55
HDAC4-201ENST00000345617 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP18.47■□□□□ 0.55
HDAC4-201ENST00000345617 BEST1O76090 585 aa18.47■□□□□ 0.55
HDAC4-201ENST00000345617 TATDN3Q17R31 274 aa18.47■□□□□ 0.55
HDAC4-201ENST00000345617 FOXRED1Q96CU9 486 aaPredicted RBP18.47■□□□□ 0.55
HDAC4-201ENST00000345617 ZNF442Q9H7R0 627 aa18.47■□□□□ 0.55
HDAC4-201ENST00000345617 KDM3BQ7LBC6 1761 aa18.47■□□□□ 0.55
HDAC4-201ENST00000345617 OR51F1A6NGY5 319 aa18.47■□□□□ 0.55
HDAC4-201ENST00000345617 CAV2P51636 162 aa18.47■□□□□ 0.55
HDAC4-201ENST00000345617 SCAPQ12770 1279 aa18.47■□□□□ 0.55
HDAC4-201ENST00000345617 ARSJQ5FYB0 599 aaPredicted RBP18.47■□□□□ 0.55
HDAC4-201ENST00000345617 MANEALQ5VSG8 457 aa18.47■□□□□ 0.55
HDAC4-201ENST00000345617 NRSN1Q8IZ57 195 aa18.47■□□□□ 0.55
HDAC4-201ENST00000345617 NAA11Q9BSU3 229 aaPredicted RBP18.47■□□□□ 0.55
HDAC4-201ENST00000345617 FZD3Q9NPG1 666 aa18.47■□□□□ 0.55
HDAC4-201ENST00000345617 ENPP7Q6UWV6 458 aa18.47■□□□□ 0.55
HDAC4-201ENST00000345617 BCO2Q9BYV7 579 aa18.47■□□□□ 0.55
HDAC4-201ENST00000345617 E9PI62 339 aa18.47■□□□□ 0.55
HDAC4-201ENST00000345617 MITFO75030 526 aaPredicted RBP18.47■□□□□ 0.55
HDAC4-201ENST00000345617 KLK3P07288 261 aaPredicted RBP18.47■□□□□ 0.55
HDAC4-201ENST00000345617 C9orf131Q5VYM1 1079 aa18.47■□□□□ 0.55
HDAC4-201ENST00000345617 DPYSL5Q9BPU6 564 aa18.47■□□□□ 0.55
HDAC4-201ENST00000345617 THAP7Q9BT49 309 aaPredicted RBP18.47■□□□□ 0.55
HDAC4-201ENST00000345617 BACE2Q9Y5Z0 518 aa18.47■□□□□ 0.55
HDAC4-201ENST00000345617 CTSOP43234 321 aaPredicted RBP18.47■□□□□ 0.55
HDAC4-201ENST00000345617 OR1E2P47887 323 aa18.47■□□□□ 0.55
HDAC4-201ENST00000345617 CLCNKAP51800 687 aa18.47■□□□□ 0.55
HDAC4-201ENST00000345617 IL13RA1P78552 427 aa18.47■□□□□ 0.55
HDAC4-201ENST00000345617 SLC35F4A4IF30 521 aa18.46■□□□□ 0.55
HDAC4-201ENST00000345617 ZNF461Q8TAF7 563 aa18.46■□□□□ 0.55
HDAC4-201ENST00000345617 NDRG1Q92597 394 aaKnown RBP18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms