RNA–Protein interactions for RNA: ENST00000344749.9

TCF3-202, Transcript of transcription factor 3, humanhuman

TSL 5 BASIC

Gene TCF3, Length 4,289 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-202ENST00000344749 ZNF517Q6ZMY9 492 aaPredicted RBP12.36□□□□□ -0.43
TCF3-202ENST00000344749 Q6ZSR6 202 aa12.36□□□□□ -0.43
TCF3-202ENST00000344749 SUN5Q8TC36 379 aa12.36□□□□□ -0.43
TCF3-202ENST00000344749 SAMD8Q96LT4 415 aa12.36□□□□□ -0.43
TCF3-202ENST00000344749 EPYCQ99645 322 aa12.36□□□□□ -0.43
TCF3-202ENST00000344749 MED28Q9H204 178 aa12.36□□□□□ -0.43
TCF3-202ENST00000344749 KCMF1Q9P0J7 381 aa12.36□□□□□ -0.43
TCF3-202ENST00000344749 IFT52Q9Y366 437 aa12.36□□□□□ -0.43
TCF3-202ENST00000344749 CAPNS1P04632 268 aa12.35□□□□□ -0.43
TCF3-202ENST00000344749 ITIH1P19827 911 aa12.35□□□□□ -0.43
TCF3-202ENST00000344749 HNRNPA2B1P22626 353 aaKnown RBP12.35□□□□□ -0.43
TCF3-202ENST00000344749 GNALP38405 381 aa12.35□□□□□ -0.43
TCF3-202ENST00000344749 TBC1D25Q3MII6 688 aa12.35□□□□□ -0.43
TCF3-202ENST00000344749 C18orf63Q68DL7 685 aa12.35□□□□□ -0.43
TCF3-202ENST00000344749 BICRALQ6AI39 1079 aa12.35□□□□□ -0.43
TCF3-202ENST00000344749 TMEM53Q6P2H8 277 aa12.35□□□□□ -0.43
TCF3-202ENST00000344749 HDDC2Q7Z4H3 204 aa12.35□□□□□ -0.43
TCF3-202ENST00000344749 C12orf40Q86WS4 652 aa12.35□□□□□ -0.43
TCF3-202ENST00000344749 VRK2Q86Y07 508 aa12.35□□□□□ -0.43
TCF3-202ENST00000344749 OR5K2Q8NHB8 316 aa12.35□□□□□ -0.43
TCF3-202ENST00000344749 THEM6Q8WUY1 208 aa12.35□□□□□ -0.43
TCF3-202ENST00000344749 LYSMD1Q96S90 227 aa12.35□□□□□ -0.43
TCF3-202ENST00000344749 NIPSNAP1Q9BPW8 284 aa12.35□□□□□ -0.43
TCF3-202ENST00000344749 DPH1Q9BZG8 443 aa12.35□□□□□ -0.43
TCF3-202ENST00000344749 TRIM2Q9C040 744 aa12.35□□□□□ -0.43
TCF3-202ENST00000344749 MBNL1Q9NR56 388 aaKnown RBP12.35□□□□□ -0.43
TCF3-202ENST00000344749 ING4Q9UNL4 249 aa12.35□□□□□ -0.43
TCF3-202ENST00000344749 PAPPA2Q9BXP8 1791 aa12.35□□□□□ -0.43
TCF3-202ENST00000344749 SLC5A10A0PJK1 596 aa12.35□□□□□ -0.43
TCF3-202ENST00000344749 ANXA2P2A6NMY6 339 aa12.35□□□□□ -0.43
TCF3-202ENST00000344749 C11orf98E9PRG8 122 aa12.35□□□□□ -0.43
TCF3-202ENST00000344749 PLD2O14939 933 aa12.35□□□□□ -0.43
TCF3-202ENST00000344749 SLITRK5O94991 958 aa12.35□□□□□ -0.43
TCF3-202ENST00000344749 CD160O95971 181 aa12.35□□□□□ -0.43
TCF3-202ENST00000344749 ANXA2P07355 339 aaKnown RBP12.35□□□□□ -0.43
TCF3-202ENST00000344749 ARAFP10398 606 aa12.35□□□□□ -0.43
TCF3-202ENST00000344749 NDUFV2P19404 249 aa12.35□□□□□ -0.43
TCF3-202ENST00000344749 DECR1Q16698 335 aa12.35□□□□□ -0.43
TCF3-202ENST00000344749 CCBE1Q6UXH8 406 aaPredicted RBP12.35□□□□□ -0.43
TCF3-202ENST00000344749 LNX2Q8N448 690 aa12.35□□□□□ -0.43
TCF3-202ENST00000344749 VN1R2Q8NFZ6 395 aa12.35□□□□□ -0.43
TCF3-202ENST00000344749 TRIM63Q969Q1 353 aa12.35□□□□□ -0.43
TCF3-202ENST00000344749 ADAD1Q96M93 576 aaKnown RBP12.35□□□□□ -0.43
TCF3-202ENST00000344749 SAMD11Q96NU1 681 aa12.35□□□□□ -0.43
TCF3-202ENST00000344749 TTYH2Q9BSA4 534 aa12.35□□□□□ -0.43
TCF3-202ENST00000344749 SLC22A4Q9H015 551 aa12.35□□□□□ -0.43
TCF3-202ENST00000344749 AKAP7Q9P0M2 348 aaPredicted RBP12.35□□□□□ -0.43
TCF3-202ENST00000344749 USP36Q9P275 1121 aaKnown RBP12.35□□□□□ -0.43
TCF3-202ENST00000344749 GVINP1Q7Z2Y8 2422 aa12.35□□□□□ -0.43
TCF3-202ENST00000344749 WBP4O75554 376 aaKnown RBP12.35□□□□□ -0.43
TCF3-202ENST00000344749 CLEC3AO75596 197 aa12.35□□□□□ -0.43
TCF3-202ENST00000344749 GASTP01350 101 aa12.35□□□□□ -0.43
TCF3-202ENST00000344749 CTSLP07711 333 aa12.35□□□□□ -0.43
TCF3-202ENST00000344749 GIMD1P0DJR0 217 aa12.35□□□□□ -0.43
TCF3-202ENST00000344749 PSMA3P25788 255 aa12.35□□□□□ -0.43
TCF3-202ENST00000344749 NIPAL1Q6NVV3 410 aa12.35□□□□□ -0.43
TCF3-202ENST00000344749 PODNL1Q6PEZ8 512 aa12.35□□□□□ -0.43
TCF3-202ENST00000344749 C1orf216Q8TAB5 229 aa12.35□□□□□ -0.43
TCF3-202ENST00000344749 MOAP1Q96BY2 351 aa12.35□□□□□ -0.43
TCF3-202ENST00000344749 ZFYVE21Q9BQ24 234 aa12.35□□□□□ -0.43
TCF3-202ENST00000344749 TMEM168Q9H0V1 697 aa12.35□□□□□ -0.43
TCF3-202ENST00000344749 UBE2QL1A1L167 161 aa12.34□□□□□ -0.43
TCF3-202ENST00000344749 HCRTR2O43614 444 aa12.34□□□□□ -0.43
TCF3-202ENST00000344749 RDH16O75452 317 aa12.34□□□□□ -0.43
TCF3-202ENST00000344749 DCDC1P59894 354 aa12.34□□□□□ -0.43
TCF3-202ENST00000344749 CHRNEQ04844 493 aa12.34□□□□□ -0.43
TCF3-202ENST00000344749 EXOSC7Q15024 291 aaKnown RBP12.34□□□□□ -0.43
TCF3-202ENST00000344749 DUSP7Q16829 419 aa12.34□□□□□ -0.43
TCF3-202ENST00000344749 BCDIN3DQ7Z5W3 292 aaKnown RBP12.34□□□□□ -0.43
TCF3-202ENST00000344749 CPOQ8IVL8 374 aa12.34□□□□□ -0.43
TCF3-202ENST00000344749 CHST4Q8NCG5 386 aa12.34□□□□□ -0.43
TCF3-202ENST00000344749 ACTRT3Q9BYD9 372 aa12.34□□□□□ -0.43
TCF3-202ENST00000344749 RLIMQ9NVW2 624 aa12.34□□□□□ -0.43
TCF3-202ENST00000344749 A0A0A6YYC8 382 aaPredicted RBP12.34□□□□□ -0.43
TCF3-202ENST00000344749 ASPDHA6ND91 283 aa12.34□□□□□ -0.43
TCF3-202ENST00000344749 I3L1I5 382 aaPredicted RBP12.34□□□□□ -0.43
TCF3-202ENST00000344749 SGK494L7N484 410 aa12.34□□□□□ -0.43
TCF3-202ENST00000344749 CHMP24386 653 aa12.34□□□□□ -0.43
TCF3-202ENST00000344749 MAOBP27338 520 aa12.34□□□□□ -0.43
TCF3-202ENST00000344749 SLC6A12P48065 614 aa12.34□□□□□ -0.43
TCF3-202ENST00000344749 PUM1Q14671 1186 aaKnown RBP eCLIP12.34□□□□□ -0.432e-6■□□□□ 10.8
TCF3-202ENST00000344749 ARHGAP19Q14CB8 494 aa12.34□□□□□ -0.43
TCF3-202ENST00000344749 RPTNQ6XPR3 784 aa12.34□□□□□ -0.43
TCF3-202ENST00000344749 TTLL10Q6ZVT0 673 aa12.34□□□□□ -0.43
TCF3-202ENST00000344749 CDS1Q92903 461 aa12.34□□□□□ -0.43
TCF3-202ENST00000344749 CNDP2Q96KP4 475 aaKnown RBP12.34□□□□□ -0.43
TCF3-202ENST00000344749 CA14Q9ULX7 337 aa12.34□□□□□ -0.43
TCF3-202ENST00000344749 OR51B4Q9Y5P0 310 aa12.34□□□□□ -0.43
TCF3-202ENST00000344749 CACNA1IQ9P0X4 2223 aa12.34□□□□□ -0.43
TCF3-202ENST00000344749 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.34□□□□□ -0.43
TCF3-202ENST00000344749 C17orf113A0A1B0GUU1 675 aa12.34□□□□□ -0.43
TCF3-202ENST00000344749 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.34□□□□□ -0.43
TCF3-202ENST00000344749 WASHC1A8K0Z3 465 aa12.34□□□□□ -0.43
TCF3-202ENST00000344749 ORC5O43913 435 aa12.34□□□□□ -0.43
TCF3-202ENST00000344749 SEMA3DO95025 777 aa12.34□□□□□ -0.43
TCF3-202ENST00000344749 EPHA2P29317 976 aa12.34□□□□□ -0.43
TCF3-202ENST00000344749 NKX2-5P52952 324 aaPredicted RBP12.34□□□□□ -0.43
TCF3-202ENST00000344749 RAB15P59190 212 aa12.34□□□□□ -0.43
TCF3-202ENST00000344749 YBX1P67809 324 aaKnown RBP12.34□□□□□ -0.43
TCF3-202ENST00000344749 LTB4RQ15722 352 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms