RNA–Protein interactions for RNA: ENST00000343366.8

CDHR4-201, Transcript of cadherin related family member 4, humanhuman

TSL 1 (best) BASIC

Gene CDHR4, Length 1,188 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR4-201ENST00000343366 ACOX3O15254 700 aa17.33■□□□□ 0.36
CDHR4-201ENST00000343366 SNRPB2P08579 225 aaKnown RBP17.33■□□□□ 0.36
CDHR4-201ENST00000343366 ZCCHC18P0CG32 403 aa17.33■□□□□ 0.36
CDHR4-201ENST00000343366 SSTR4P31391 388 aa17.33■□□□□ 0.36
CDHR4-201ENST00000343366 SOX11P35716 441 aa17.33■□□□□ 0.36
CDHR4-201ENST00000343366 PPICP45877 212 aa17.33■□□□□ 0.36
CDHR4-201ENST00000343366 ZFP36L2P47974 494 aaKnown RBP17.33■□□□□ 0.36
CDHR4-201ENST00000343366 CCT3P49368 545 aaKnown RBP17.33■□□□□ 0.36
CDHR4-201ENST00000343366 PRIM2P49643 509 aa17.33■□□□□ 0.36
CDHR4-201ENST00000343366 DGKQP52824 942 aa17.33■□□□□ 0.36
CDHR4-201ENST00000343366 NRG3P56975 720 aa17.33■□□□□ 0.36
CDHR4-201ENST00000343366 PHC1P78364 1004 aa17.33■□□□□ 0.36
CDHR4-201ENST00000343366 MRPS35P82673 323 aaKnown RBP17.33■□□□□ 0.36
CDHR4-201ENST00000343366 EBPQ15125 230 aaKnown RBP17.33■□□□□ 0.36
CDHR4-201ENST00000343366 SPDYE7PQ495Y7 208 aa17.33■□□□□ 0.36
CDHR4-201ENST00000343366 COQ5Q5HYK3 327 aa17.33■□□□□ 0.36
CDHR4-201ENST00000343366 FUNDC1Q8IVP5 155 aa17.33■□□□□ 0.36
CDHR4-201ENST00000343366 GPALPP1Q8IXQ4 340 aa17.33■□□□□ 0.36
CDHR4-201ENST00000343366 TAGAPQ8N103 731 aa17.33■□□□□ 0.36
CDHR4-201ENST00000343366 NUP43Q8NFH3 380 aa17.33■□□□□ 0.36
CDHR4-201ENST00000343366 FDCSPQ8NFU4 85 aa17.33■□□□□ 0.36
CDHR4-201ENST00000343366 C16orf52Q8NHV5 167 aa17.33■□□□□ 0.36
CDHR4-201ENST00000343366 SLC22A8Q8TCC7 542 aa17.33■□□□□ 0.36
CDHR4-201ENST00000343366 PSMF1Q92530 271 aa17.33■□□□□ 0.36
CDHR4-201ENST00000343366 HSPBAP1Q96EW2 488 aa17.33■□□□□ 0.36
CDHR4-201ENST00000343366 MS4A4EQ96PG1 132 aa17.33■□□□□ 0.36
CDHR4-201ENST00000343366 NMUR2Q9GZQ4 415 aa17.33■□□□□ 0.36
CDHR4-201ENST00000343366 WWTR1Q9GZV5 400 aa17.33■□□□□ 0.36
CDHR4-201ENST00000343366 ZNF552Q9H707 407 aaPredicted RBP17.33■□□□□ 0.36
CDHR4-201ENST00000343366 GIN1Q9NXP7 522 aa17.33■□□□□ 0.36
CDHR4-201ENST00000343366 LEF1Q9UJU2 399 aaPredicted RBP17.33■□□□□ 0.36
CDHR4-201ENST00000343366 ZNF223Q9UK11 482 aaPredicted RBP17.33■□□□□ 0.36
CDHR4-201ENST00000343366 NDUFAF1Q9Y375 327 aa17.33■□□□□ 0.36
CDHR4-201ENST00000343366 SNX8Q9Y5X2 465 aa17.33■□□□□ 0.36
CDHR4-201ENST00000343366 CELSR1Q9NYQ6 3014 aa17.32■□□□□ 0.36
CDHR4-201ENST00000343366 A6NL46 340 aa17.32■□□□□ 0.36
CDHR4-201ENST00000343366 A8MUI8 341 aa17.32■□□□□ 0.36
CDHR4-201ENST00000343366 NR5A2O00482 541 aa17.32■□□□□ 0.36
CDHR4-201ENST00000343366 ANGPT2O15123 496 aa17.32■□□□□ 0.36
CDHR4-201ENST00000343366 ERN1O75460 977 aaKnown RBP17.32■□□□□ 0.36
CDHR4-201ENST00000343366 DNAJB5O75953 348 aa17.32■□□□□ 0.36
CDHR4-201ENST00000343366 PSMG1O95456 288 aa17.32■□□□□ 0.36
CDHR4-201ENST00000343366 ANP32DO95626 131 aa17.32■□□□□ 0.36
CDHR4-201ENST00000343366 NPPAP01160 153 aa17.32■□□□□ 0.36
CDHR4-201ENST00000343366 DRD5P21918 477 aa17.32■□□□□ 0.36
CDHR4-201ENST00000343366 EMDP50402 254 aa17.32■□□□□ 0.36
CDHR4-201ENST00000343366 ANXA11P50995 505 aaKnown RBP17.32■□□□□ 0.36
CDHR4-201ENST00000343366 MLF1P58340 268 aa17.32■□□□□ 0.36
CDHR4-201ENST00000343366 SF3A3Q12874 501 aaKnown RBP eCLIP17.32■□□□□ 0.36
CDHR4-201ENST00000343366 KLF10Q13118 480 aa17.32■□□□□ 0.36
CDHR4-201ENST00000343366 STX5Q13190 355 aa17.32■□□□□ 0.36
CDHR4-201ENST00000343366 MFAP5Q13361 173 aa17.32■□□□□ 0.36
CDHR4-201ENST00000343366 TP53BP2Q13625 1128 aa17.32■□□□□ 0.36
CDHR4-201ENST00000343366 TIGD2Q4W5G0 525 aa17.32■□□□□ 0.36
CDHR4-201ENST00000343366 ACER2Q5QJU3 275 aa17.32■□□□□ 0.36
CDHR4-201ENST00000343366 ZNF787Q6DD87 383 aa17.32■□□□□ 0.36
CDHR4-201ENST00000343366 IGFL2Q6UWQ7 119 aa17.32■□□□□ 0.36
CDHR4-201ENST00000343366 MTDHQ86UE4 582 aaKnown RBP17.32■□□□□ 0.36
CDHR4-201ENST00000343366 C9orf40Q8IXQ3 194 aa17.32■□□□□ 0.36
CDHR4-201ENST00000343366 KIF2BQ8N4N8 673 aa17.32■□□□□ 0.36
CDHR4-201ENST00000343366 HORMAD2Q8N7B1 307 aa17.32■□□□□ 0.36
CDHR4-201ENST00000343366 CDRT4Q8N9R6 151 aa17.32■□□□□ 0.36
CDHR4-201ENST00000343366 CCDC197Q8NCU1 140 aa17.32■□□□□ 0.36
CDHR4-201ENST00000343366 CPT1CQ8TCG5 803 aa17.32■□□□□ 0.36
CDHR4-201ENST00000343366 BCAS4Q8TDM0 211 aa17.32■□□□□ 0.36
CDHR4-201ENST00000343366 FAM120BQ96EK7 910 aaKnown RBP17.32■□□□□ 0.36
CDHR4-201ENST00000343366 LRRC37BQ96QE4 947 aa17.32■□□□□ 0.36
CDHR4-201ENST00000343366 PHF12Q96QT6 1004 aa17.32■□□□□ 0.36
CDHR4-201ENST00000343366 CDCP1Q9H5V8 836 aa17.32■□□□□ 0.36
CDHR4-201ENST00000343366 SIRT3Q9NTG7 399 aaPredicted RBP17.32■□□□□ 0.36
CDHR4-201ENST00000343366 ZCCHC3Q9NUD5 404 aaKnown RBP17.32■□□□□ 0.36
CDHR4-201ENST00000343366 STMN3Q9NZ72 180 aa17.32■□□□□ 0.36
CDHR4-201ENST00000343366 PCDHGB3Q9Y5G1 929 aa17.32■□□□□ 0.36
CDHR4-201ENST00000343366 CPAMD8Q8IZJ3 1885 aa17.32■□□□□ 0.36
CDHR4-201ENST00000343366 C2CD3Q4AC94 2353 aa17.31■□□□□ 0.36
CDHR4-201ENST00000343366 DUXAA6NLW8 204 aa17.31■□□□□ 0.36
CDHR4-201ENST00000343366 HRKO00198 91 aa17.31■□□□□ 0.36
CDHR4-201ENST00000343366 NDUFAB1O14561 156 aa17.31■□□□□ 0.36
CDHR4-201ENST00000343366 CPSF4O95639 269 aaKnown RBP17.31■□□□□ 0.36
CDHR4-201ENST00000343366 CLDN1O95832 211 aa17.31■□□□□ 0.36
CDHR4-201ENST00000343366 CLPSP04118 112 aa17.31■□□□□ 0.36
CDHR4-201ENST00000343366 ABCB1P08183 1280 aaPredicted RBP17.31■□□□□ 0.36
CDHR4-201ENST00000343366 SOX18P35713 384 aa17.31■□□□□ 0.36
CDHR4-201ENST00000343366 DCTP40126 519 aa17.31■□□□□ 0.36
CDHR4-201ENST00000343366 TMED10P49755 219 aaKnown RBP17.31■□□□□ 0.36
CDHR4-201ENST00000343366 CDK9P50750 372 aaKnown RBP17.31■□□□□ 0.36
CDHR4-201ENST00000343366 EXOSC7Q15024 291 aaKnown RBP17.31■□□□□ 0.36
CDHR4-201ENST00000343366 OPN5Q6U736 354 aa17.31■□□□□ 0.36
CDHR4-201ENST00000343366 IGFL3Q6UXB1 125 aa17.31■□□□□ 0.36
CDHR4-201ENST00000343366 CLECL1Q8IZS7 167 aa17.31■□□□□ 0.36
CDHR4-201ENST00000343366 SIRT6Q8N6T7 355 aa17.31■□□□□ 0.36
CDHR4-201ENST00000343366 ZNF321PQ8N8H1 164 aa17.31■□□□□ 0.36
CDHR4-201ENST00000343366 RP9Q8TA86 221 aaKnown RBP17.31■□□□□ 0.36
CDHR4-201ENST00000343366 ADIPOR1Q96A54 375 aa17.31■□□□□ 0.36
CDHR4-201ENST00000343366 CMTM5Q96DZ9 223 aa17.31■□□□□ 0.36
CDHR4-201ENST00000343366 LCORQ96JN0 433 aaPredicted RBP17.31■□□□□ 0.36
CDHR4-201ENST00000343366 BTBD9Q96Q07 612 aa17.31■□□□□ 0.36
CDHR4-201ENST00000343366 MRTO4Q9UKD2 239 aaKnown RBP17.31■□□□□ 0.36
CDHR4-201ENST00000343366 FAF1Q9UNN5 650 aaPredicted RBP17.31■□□□□ 0.36
CDHR4-201ENST00000343366 FRG2CA6NGY1 282 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms