RNA–Protein interactions for RNA: ENST00000343257.6

CLCN1-201, Transcript of chloride voltage-gated channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN1, Length 3,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-201ENST00000343257 MTMR11A4FU01 709 aa14.03□□□□□ -0.16
CLCN1-201ENST00000343257 RTCAO00442 366 aaKnown RBP14.03□□□□□ -0.16
CLCN1-201ENST00000343257 STK25O00506 426 aa14.03□□□□□ -0.16
CLCN1-201ENST00000343257 FAAHO00519 579 aa14.03□□□□□ -0.16
CLCN1-201ENST00000343257 FRS3O43559 492 aa14.03□□□□□ -0.16
CLCN1-201ENST00000343257 GPR37L1O60883 481 aa14.03□□□□□ -0.16
CLCN1-201ENST00000343257 STC2O76061 302 aa14.03□□□□□ -0.16
CLCN1-201ENST00000343257 SLC16A8O95907 504 aa14.03□□□□□ -0.16
CLCN1-201ENST00000343257 SLC1A3P43003 542 aa14.03□□□□□ -0.16
CLCN1-201ENST00000343257 GRB14Q14449 540 aa14.03□□□□□ -0.16
CLCN1-201ENST00000343257 SFRP5Q5T4F7 317 aa14.03□□□□□ -0.16
CLCN1-201ENST00000343257 ALKAL2Q6UX46 152 aa14.03□□□□□ -0.16
CLCN1-201ENST00000343257 DEFB132Q7Z7B7 95 aa14.03□□□□□ -0.16
CLCN1-201ENST00000343257 SYT9Q86SS6 491 aa14.03□□□□□ -0.16
CLCN1-201ENST00000343257 SDR16C5Q8N3Y7 309 aa14.03□□□□□ -0.16
CLCN1-201ENST00000343257 FAM26EQ8N5C1 309 aa14.03□□□□□ -0.16
CLCN1-201ENST00000343257 ZNF740Q8NDX6 193 aa14.03□□□□□ -0.16
CLCN1-201ENST00000343257 GCDHQ92947 438 aaPredicted RBP14.03□□□□□ -0.16
CLCN1-201ENST00000343257 CLP1Q92989 425 aaKnown RBP14.03□□□□□ -0.16
CLCN1-201ENST00000343257 SCMH1Q96GD3 660 aa14.03□□□□□ -0.16
CLCN1-201ENST00000343257 ZSWIM3Q96MP5 696 aa14.03□□□□□ -0.16
CLCN1-201ENST00000343257 ARHGAP9Q9BRR9 750 aa14.03□□□□□ -0.16
CLCN1-201ENST00000343257 TMEM38AQ9H6F2 299 aa14.03□□□□□ -0.16
CLCN1-201ENST00000343257 DLL4Q9NR61 685 aa14.03□□□□□ -0.16
CLCN1-201ENST00000343257 CUEDC1Q9NWM3 386 aaPredicted RBP14.03□□□□□ -0.16
CLCN1-201ENST00000343257 COL4A4P53420 1690 aaPredicted RBP14.03□□□□□ -0.16
CLCN1-201ENST00000343257 CCL15-CCL14A0A0B4J2E2 113 aa14.03□□□□□ -0.16
CLCN1-201ENST00000343257 TRDV1A0A1B0GX56 115 aa14.03□□□□□ -0.16
CLCN1-201ENST00000343257 FAM183AA6NL82 134 aa14.03□□□□□ -0.16
CLCN1-201ENST00000343257 SLC28A2O43868 658 aa14.03□□□□□ -0.16
CLCN1-201ENST00000343257 IFNA16P05015 189 aa14.03□□□□□ -0.16
CLCN1-201ENST00000343257 FURINP09958 794 aa14.03□□□□□ -0.16
CLCN1-201ENST00000343257 AHCYP23526 432 aa14.03□□□□□ -0.16
CLCN1-201ENST00000343257 BTG1P62324 171 aa14.03□□□□□ -0.16
CLCN1-201ENST00000343257 GRIN2CQ14957 1233 aa14.03□□□□□ -0.16
CLCN1-201ENST00000343257 CCL15Q16663 113 aa14.03□□□□□ -0.16
CLCN1-201ENST00000343257 ZNF467Q7Z7K2 595 aaPredicted RBP14.03□□□□□ -0.16
CLCN1-201ENST00000343257 GPALPP1Q8IXQ4 340 aa14.03□□□□□ -0.16
CLCN1-201ENST00000343257 TOMM5Q8N4H5 51 aa14.03□□□□□ -0.16
CLCN1-201ENST00000343257 OR5D16Q8NGK9 328 aa14.03□□□□□ -0.16
CLCN1-201ENST00000343257 C16orf78Q8WTQ4 265 aa14.03□□□□□ -0.16
CLCN1-201ENST00000343257 XAGE5Q8WWM1 108 aa14.03□□□□□ -0.16
CLCN1-201ENST00000343257 WDR89Q96FK6 387 aaPredicted RBP14.03□□□□□ -0.16
CLCN1-201ENST00000343257 SCRN2Q96FV2 425 aa14.03□□□□□ -0.16
CLCN1-201ENST00000343257 FCRL4Q96PJ5 515 aa14.03□□□□□ -0.16
CLCN1-201ENST00000343257 POLDIP3Q9BY77 421 aaKnown RBP14.03□□□□□ -0.16
CLCN1-201ENST00000343257 hCG_1807616A0A1W2PRN6 198 aa14.02□□□□□ -0.16
CLCN1-201ENST00000343257 SLC38A8A6NNN8 435 aa14.02□□□□□ -0.16
CLCN1-201ENST00000343257 OAZ2O95190 189 aa14.02□□□□□ -0.16
CLCN1-201ENST00000343257 HLA-DPB1P04440 258 aa14.02□□□□□ -0.16
CLCN1-201ENST00000343257 ACP2P11117 423 aa14.02□□□□□ -0.16
CLCN1-201ENST00000343257 AKR1D1P51857 326 aa14.02□□□□□ -0.16
CLCN1-201ENST00000343257 GBX2P52951 348 aaPredicted RBP14.02□□□□□ -0.16
CLCN1-201ENST00000343257 GAS1P54826 345 aa14.02□□□□□ -0.16
CLCN1-201ENST00000343257 CDH11P55287 796 aa14.02□□□□□ -0.16
CLCN1-201ENST00000343257 RPS7P62081 194 aaKnown RBP14.02□□□□□ -0.16
CLCN1-201ENST00000343257 DGCR2P98153 550 aa14.02□□□□□ -0.16
CLCN1-201ENST00000343257 RIN1Q13671 783 aa14.02□□□□□ -0.16
CLCN1-201ENST00000343257 SYPL1Q16563 259 aa14.02□□□□□ -0.16
CLCN1-201ENST00000343257 C3orf38Q5JPI3 329 aa14.02□□□□□ -0.16
CLCN1-201ENST00000343257 SLC30A6Q6NXT4 461 aa14.02□□□□□ -0.16
CLCN1-201ENST00000343257 METTL2BQ6P1Q9 378 aaKnown RBP14.02□□□□□ -0.16
CLCN1-201ENST00000343257 WASH2PQ6VEQ5 465 aa14.02□□□□□ -0.16
CLCN1-201ENST00000343257 C17orf107Q6ZR85 190 aa14.02□□□□□ -0.16
CLCN1-201ENST00000343257 LRRTM4Q86VH4 590 aa14.02□□□□□ -0.16
CLCN1-201ENST00000343257 ADGRG3Q86Y34 549 aa14.02□□□□□ -0.16
CLCN1-201ENST00000343257 BHLHE41Q9C0J9 482 aaPredicted RBP14.02□□□□□ -0.16
CLCN1-201ENST00000343257 OSGEPL1Q9H4B0 414 aa14.02□□□□□ -0.16
CLCN1-201ENST00000343257 NT5DC2Q9H857 520 aa14.02□□□□□ -0.16
CLCN1-201ENST00000343257 TRPC4Q9UBN4 977 aa14.02□□□□□ -0.16
CLCN1-201ENST00000343257 KCND3Q9UK17 655 aa14.02□□□□□ -0.16
CLCN1-201ENST00000343257 SYNDIG1LA6NDD5 238 aa14.02□□□□□ -0.17
CLCN1-201ENST00000343257 SLC2A10O95528 541 aa14.02□□□□□ -0.17
CLCN1-201ENST00000343257 CBSLP0DN79 551 aa14.02□□□□□ -0.17
CLCN1-201ENST00000343257 CBSP35520 551 aa14.02□□□□□ -0.17
CLCN1-201ENST00000343257 METAP1DQ6UB28 335 aaPredicted RBP14.02□□□□□ -0.17
CLCN1-201ENST00000343257 PRSS55Q6UWB4 352 aaPredicted RBP14.02□□□□□ -0.17
CLCN1-201ENST00000343257 OR52H1Q8NGJ2 320 aa14.02□□□□□ -0.17
CLCN1-201ENST00000343257 SMAP2Q8WU79 429 aaPredicted RBP14.02□□□□□ -0.17
CLCN1-201ENST00000343257 SFXN2Q96NB2 322 aa14.02□□□□□ -0.17
CLCN1-201ENST00000343257 TTTY10Q9BZA0 68 aa14.02□□□□□ -0.17
CLCN1-201ENST00000343257 BRD7Q9NPI1 651 aa14.02□□□□□ -0.17
CLCN1-201ENST00000343257 CPNE7Q9UBL6 633 aa14.02□□□□□ -0.17
CLCN1-201ENST00000343257 KCNMB2Q9Y691 235 aa14.02□□□□□ -0.17
CLCN1-201ENST00000343257 ARHGAP15Q53QZ3 475 aa14.02□□□□□ -0.17
CLCN1-201ENST00000343257 FERD3LQ96RJ6 166 aa14.02□□□□□ -0.17
CLCN1-201ENST00000343257 QRSL1Q9H0R6 528 aaKnown RBP14.02□□□□□ -0.17
CLCN1-201ENST00000343257 CFAP97Q9P2B7 532 aa14.02□□□□□ -0.17
CLCN1-201ENST00000343257 STOX2Q9P2F5 926 aaPredicted RBP14.02□□□□□ -0.17
CLCN1-201ENST00000343257 LAMA2P24043 3122 aaKnown RBP14.01□□□□□ -0.17
CLCN1-201ENST00000343257 DOCK3Q8IZD9 2030 aa14.01□□□□□ -0.17
CLCN1-201ENST00000343257 URODP06132 367 aa14.01□□□□□ -0.17
CLCN1-201ENST00000343257 LCN1P31025 176 aa14.01□□□□□ -0.17
CLCN1-201ENST00000343257 PITPNBP48739 271 aa14.01□□□□□ -0.17
CLCN1-201ENST00000343257 BLVRAP53004 296 aa14.01□□□□□ -0.17
CLCN1-201ENST00000343257 PRKAG1P54619 331 aa14.01□□□□□ -0.17
CLCN1-201ENST00000343257 SLBPQ14493 270 aaKnown RBP eCLIP14.01□□□□□ -0.17
CLCN1-201ENST00000343257 GPR33Q49SQ1 333 aa14.01□□□□□ -0.17
CLCN1-201ENST00000343257 GLB1LQ6UWU2 654 aa14.01□□□□□ -0.17
CLCN1-201ENST00000343257 BBS10Q8TAM1 723 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms