RNA–Protein interactions for RNA: ENST00000342503.8

RTN1-202, Transcript of reticulon 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RTN1, Length 1,703 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-202ENST00000342503 EXOSC7Q15024 291 aaKnown RBP18.69■□□□□ 0.58
RTN1-202ENST00000342503 SYT16Q17RD7 645 aa18.69■□□□□ 0.58
RTN1-202ENST00000342503 CNPY1Q3B7I2 92 aa18.69■□□□□ 0.58
RTN1-202ENST00000342503 ARHGAP11BQ3KRB8 267 aa18.69■□□□□ 0.58
RTN1-202ENST00000342503 PMS2CLQ68D20 193 aa18.69■□□□□ 0.58
RTN1-202ENST00000342503 DGAT2L6Q6ZPD8 337 aa18.69■□□□□ 0.58
RTN1-202ENST00000342503 VRK2Q86Y07 508 aa18.69■□□□□ 0.58
RTN1-202ENST00000342503 OR6C4Q8NGE1 309 aa18.69■□□□□ 0.58
RTN1-202ENST00000342503 CNIH3Q8TBE1 160 aa18.69■□□□□ 0.58
RTN1-202ENST00000342503 ADAMTS16Q8TE57 1224 aa18.69■□□□□ 0.58
RTN1-202ENST00000342503 DHRS1Q96LJ7 313 aa18.69■□□□□ 0.58
RTN1-202ENST00000342503 PITX2Q99697 317 aa18.69■□□□□ 0.58
RTN1-202ENST00000342503 APOL4Q9BPW4 351 aa18.69■□□□□ 0.58
RTN1-202ENST00000342503 ACAD8Q9UKU7 415 aa18.69■□□□□ 0.58
RTN1-202ENST00000342503 A4GNTQ9UNA3 340 aa18.69■□□□□ 0.58
RTN1-202ENST00000342503 SLC9A8Q9Y2E8 581 aa18.69■□□□□ 0.58
RTN1-202ENST00000342503 HSPE1-MOB4S4R3N1 261 aa18.69■□□□□ 0.58
RTN1-202ENST00000342503 SPTBP11277 2137 aa18.68■□□□□ 0.58
RTN1-202ENST00000342503 DUX1O43812 170 aa18.68■□□□□ 0.58
RTN1-202ENST00000342503 FCMRO60667 390 aa18.68■□□□□ 0.58
RTN1-202ENST00000342503 H1F0P07305 194 aaKnown RBP18.68■□□□□ 0.58
RTN1-202ENST00000342503 IFI6P09912 130 aa18.68■□□□□ 0.58
RTN1-202ENST00000342503 EEF1B2P24534 225 aaKnown RBP18.68■□□□□ 0.58
RTN1-202ENST00000342503 ARRB1P49407 418 aaPredicted RBP18.68■□□□□ 0.58
RTN1-202ENST00000342503 SEPHS1P49903 392 aa18.68■□□□□ 0.58
RTN1-202ENST00000342503 INAVAQ3KP66 663 aa18.68■□□□□ 0.58
RTN1-202ENST00000342503 EXOSC6Q5RKV6 272 aaKnown RBP18.68■□□□□ 0.58
RTN1-202ENST00000342503 MLIPQ5VWP3 458 aa18.68■□□□□ 0.58
RTN1-202ENST00000342503 FRRS1Q6ZNA5 592 aa18.68■□□□□ 0.58
RTN1-202ENST00000342503 METTL27Q8N6F8 245 aaPredicted RBP18.68■□□□□ 0.58
RTN1-202ENST00000342503 RBM38Q9H0Z9 239 aaKnown RBP18.68■□□□□ 0.58
RTN1-202ENST00000342503 PIGUQ9H490 435 aa18.68■□□□□ 0.58
RTN1-202ENST00000342503 TMEM9Q9P0T7 183 aa18.68■□□□□ 0.58
RTN1-202ENST00000342503 TMCC3Q9ULS5 477 aa18.68■□□□□ 0.58
RTN1-202ENST00000342503 FITM1A5D6W6 292 aa18.67■□□□□ 0.58
RTN1-202ENST00000342503 ARRDC5A6NEK1 342 aa18.67■□□□□ 0.58
RTN1-202ENST00000342503 OR10H2O60403 315 aa18.67■□□□□ 0.58
RTN1-202ENST00000342503 ALOX5P09917 674 aa18.67■□□□□ 0.58
RTN1-202ENST00000342503 ELAVL4P26378 380 aaKnown RBP18.67■□□□□ 0.58
RTN1-202ENST00000342503 GPR3P46089 330 aa18.67■□□□□ 0.58
RTN1-202ENST00000342503 AVPR1BP47901 424 aa18.67■□□□□ 0.58
RTN1-202ENST00000342503 SLC13A2Q13183 592 aa18.67■□□□□ 0.58
RTN1-202ENST00000342503 ERV3-1Q14264 604 aa18.67■□□□□ 0.58
RTN1-202ENST00000342503 FGD3Q5JSP0 725 aa18.67■□□□□ 0.58
RTN1-202ENST00000342503 ZNF770Q6IQ21 691 aaPredicted RBP18.67■□□□□ 0.58
RTN1-202ENST00000342503 ZNF773Q6PK81 442 aa18.67■□□□□ 0.58
RTN1-202ENST00000342503 Q6ZPB1 254 aaPredicted RBP18.67■□□□□ 0.58
RTN1-202ENST00000342503 CCDC71Q8IV32 467 aaPredicted RBP18.67■□□□□ 0.58
RTN1-202ENST00000342503 AQP11Q8NBQ7 271 aa18.67■□□□□ 0.58
RTN1-202ENST00000342503 OR6T1Q8NGN1 323 aa18.67■□□□□ 0.58
RTN1-202ENST00000342503 CTHRC1Q96CG8 243 aa18.67■□□□□ 0.58
RTN1-202ENST00000342503 DGCR14Q96DF8 476 aaKnown RBP18.67■□□□□ 0.58
RTN1-202ENST00000342503 MMABQ96EY8 250 aaPredicted RBP18.67■□□□□ 0.58
RTN1-202ENST00000342503 ZNF556Q9HAH1 456 aa18.67■□□□□ 0.58
RTN1-202ENST00000342503 AASSQ9UDR5 926 aa18.67■□□□□ 0.58
RTN1-202ENST00000342503 MKLN1Q9UL63 735 aa18.67■□□□□ 0.58
RTN1-202ENST00000342503 SDK1Q7Z5N4 2213 aa18.67■□□□□ 0.58
RTN1-202ENST00000342503 TGFBR3LH3BV60 316 aa18.66■□□□□ 0.58
RTN1-202ENST00000342503 SLC1A7O00341 560 aa18.66■□□□□ 0.58
RTN1-202ENST00000342503 PCDHGA12O60330 932 aa18.66■□□□□ 0.58
RTN1-202ENST00000342503 CTNSO60931 367 aa18.66■□□□□ 0.58
RTN1-202ENST00000342503 GASTP01350 101 aa18.66■□□□□ 0.58
RTN1-202ENST00000342503 POU2F1P14859 743 aa18.66■□□□□ 0.58
RTN1-202ENST00000342503 CSF2RBP32927 897 aa18.66■□□□□ 0.58
RTN1-202ENST00000342503 MAPK10P53779 464 aa18.66■□□□□ 0.58
RTN1-202ENST00000342503 PIN1Q13526 163 aaPredicted RBP18.66■□□□□ 0.58
RTN1-202ENST00000342503 NR1D2Q14995 579 aa18.66■□□□□ 0.58
RTN1-202ENST00000342503 SEC23BQ15437 767 aa18.66■□□□□ 0.58
RTN1-202ENST00000342503 NPTX1Q15818 432 aa18.66■□□□□ 0.58
RTN1-202ENST00000342503 SNAP47Q5SQN1 464 aa18.66■□□□□ 0.58
RTN1-202ENST00000342503 DCST1Q5T197 706 aa18.66■□□□□ 0.58
RTN1-202ENST00000342503 TYW3Q6IPR3 259 aaKnown RBP18.66■□□□□ 0.58
RTN1-202ENST00000342503 TSPYL5Q86VY4 417 aaPredicted RBP18.66■□□□□ 0.58
RTN1-202ENST00000342503 PLXDC1Q8IUK5 500 aa18.66■□□□□ 0.58
RTN1-202ENST00000342503 ZNF595Q8IYB9 648 aa18.66■□□□□ 0.58
RTN1-202ENST00000342503 CDRT4Q8N9R6 151 aa18.66■□□□□ 0.58
RTN1-202ENST00000342503 OR52P1PQ8NH57 321 aa18.66■□□□□ 0.58
RTN1-202ENST00000342503 ADAMTS18Q8TE60 1221 aa18.66■□□□□ 0.58
RTN1-202ENST00000342503 GTPBP3Q969Y2 492 aaKnown RBP18.66■□□□□ 0.58
RTN1-202ENST00000342503 HRASLS5Q96KN8 279 aa18.66■□□□□ 0.58
RTN1-202ENST00000342503 MYCBPQ99417 103 aaPredicted RBP18.66■□□□□ 0.58
RTN1-202ENST00000342503 ARHGDIGQ99819 225 aa18.66■□□□□ 0.58
RTN1-202ENST00000342503 PRTFDC1Q9NRG1 225 aa18.66■□□□□ 0.58
RTN1-202ENST00000342503 PILRBQ9UKJ0 227 aa18.66■□□□□ 0.58
RTN1-202ENST00000342503 MRPS33Q9Y291 106 aaKnown RBP18.66■□□□□ 0.58
RTN1-202ENST00000342503 TMEM184BQ9Y519 407 aaPredicted RBP18.66■□□□□ 0.58
RTN1-202ENST00000342503 BLACEA4D250 179 aa18.66■□□□□ 0.58
RTN1-202ENST00000342503 SYT5O00445 386 aa18.66■□□□□ 0.58
RTN1-202ENST00000342503 HRO43593 1189 aa18.66■□□□□ 0.58
RTN1-202ENST00000342503 CDC123O75794 336 aaPredicted RBP18.66■□□□□ 0.58
RTN1-202ENST00000342503 SMIM11AP58511 58 aa18.66■□□□□ 0.58
RTN1-202ENST00000342503 GABARAPL2P60520 117 aa18.66■□□□□ 0.58
RTN1-202ENST00000342503 HSD11B2P80365 405 aa18.66■□□□□ 0.58
RTN1-202ENST00000342503 SIGLEC14Q08ET2 396 aa18.66■□□□□ 0.58
RTN1-202ENST00000342503 STX4Q12846 297 aa18.66■□□□□ 0.58
RTN1-202ENST00000342503 GRM7Q14831 915 aa18.66■□□□□ 0.58
RTN1-202ENST00000342503 LAIR1Q6GTX8 287 aa18.66■□□□□ 0.58
RTN1-202ENST00000342503 ZCCHC12Q6PEW1 402 aa18.66■□□□□ 0.58
RTN1-202ENST00000342503 KCTD8Q6ZWB6 473 aa18.66■□□□□ 0.58
RTN1-202ENST00000342503 CARFQ8N187 725 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms