RNA–Protein interactions for RNA: ENST00000340958.3

CLDN4-201, Transcript of claudin 4, humanhuman

APPRIS P1 BASIC

Gene CLDN4, Length 1,831 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-201ENST00000340958 CDS1Q92903 461 aa16.18■□□□□ 0.18
CLDN4-201ENST00000340958 TAMM41Q96BW9 452 aa16.18■□□□□ 0.18
CLDN4-201ENST00000340958 ZNF578Q96N58 590 aaPredicted RBP16.18■□□□□ 0.18
CLDN4-201ENST00000340958 TREX2Q9BQ50 279 aaPredicted RBP16.18■□□□□ 0.18
CLDN4-201ENST00000340958 SPATA5L1Q9BVQ7 753 aa16.18■□□□□ 0.18
CLDN4-201ENST00000340958 CALML5Q9NZT1 146 aa16.18■□□□□ 0.18
CLDN4-201ENST00000340958 DTNAQ9Y4J8 743 aa16.18■□□□□ 0.18
CLDN4-201ENST00000340958 CLCA3PQ9Y6N3 262 aa16.18■□□□□ 0.18
CLDN4-201ENST00000340958 GCM2O75603 506 aaPredicted RBP16.17■□□□□ 0.18
CLDN4-201ENST00000340958 KLK3P07288 261 aaPredicted RBP16.17■□□□□ 0.18
CLDN4-201ENST00000340958 IFI6P09912 130 aa16.17■□□□□ 0.18
CLDN4-201ENST00000340958 PCBP3P57721 371 aaKnown RBP16.17■□□□□ 0.18
CLDN4-201ENST00000340958 MC2RQ01718 297 aa16.17■□□□□ 0.18
CLDN4-201ENST00000340958 MGAT2Q10469 447 aa16.17■□□□□ 0.18
CLDN4-201ENST00000340958 NKG7Q16617 165 aa16.17■□□□□ 0.18
CLDN4-201ENST00000340958 OGFRL1Q5TC84 451 aaPredicted RBP16.17■□□□□ 0.18
CLDN4-201ENST00000340958 HMBOX1Q6NT76 420 aa16.17■□□□□ 0.18
CLDN4-201ENST00000340958 ZCCHC12Q6PEW1 402 aa16.17■□□□□ 0.18
CLDN4-201ENST00000340958 IZUMO2Q6UXV1 221 aa16.17■□□□□ 0.18
CLDN4-201ENST00000340958 GLRX5Q86SX6 157 aa16.17■□□□□ 0.18
CLDN4-201ENST00000340958 TSLPQ969D9 159 aa16.17■□□□□ 0.18
CLDN4-201ENST00000340958 CTHRC1Q96CG8 243 aa16.17■□□□□ 0.18
CLDN4-201ENST00000340958 SLC35A4Q96G79 324 aa16.17■□□□□ 0.18
CLDN4-201ENST00000340958 COL21A1Q96P44 957 aa16.17■□□□□ 0.18
CLDN4-201ENST00000340958 FBXO8Q9NRD0 319 aa16.17■□□□□ 0.18
CLDN4-201ENST00000340958 TOR4AQ9NXH8 423 aa16.17■□□□□ 0.18
CLDN4-201ENST00000340958 SEC14L3Q9UDX4 400 aa16.17■□□□□ 0.18
CLDN4-201ENST00000340958 ERVK-19Q9WJR5 959 aa16.17■□□□□ 0.18
CLDN4-201ENST00000340958 LOXL2Q9Y4K0 774 aa16.17■□□□□ 0.18
CLDN4-201ENST00000340958 KCNE3Q9Y6H6 103 aa16.17■□□□□ 0.18
CLDN4-201ENST00000340958 SAC3D1A6NKF1 404 aa16.17■□□□□ 0.18
CLDN4-201ENST00000340958 hCG_2039718K7EN88 272 aa16.17■□□□□ 0.18
CLDN4-201ENST00000340958 HEXBP07686 556 aa16.17■□□□□ 0.18
CLDN4-201ENST00000340958 SSTR4P31391 388 aa16.17■□□□□ 0.18
CLDN4-201ENST00000340958 MAN2A2P49641 1150 aa16.17■□□□□ 0.18
CLDN4-201ENST00000340958 IFI44LQ53G44 452 aa16.17■□□□□ 0.18
CLDN4-201ENST00000340958 MLIPQ5VWP3 458 aa16.17■□□□□ 0.18
CLDN4-201ENST00000340958 TMEM151BQ8IW70 566 aa16.17■□□□□ 0.18
CLDN4-201ENST00000340958 COX18Q8N8Q8 333 aa16.17■□□□□ 0.18
CLDN4-201ENST00000340958 STT3BQ8TCJ2 826 aa16.17■□□□□ 0.18
CLDN4-201ENST00000340958 RASSF5Q8WWW0 418 aa16.17■□□□□ 0.18
CLDN4-201ENST00000340958 CIB1Q99828 191 aa16.17■□□□□ 0.18
CLDN4-201ENST00000340958 ULBP3Q9BZM4 244 aa16.17■□□□□ 0.18
CLDN4-201ENST00000340958 TRIM45Q9H8W5 580 aaPredicted RBP16.17■□□□□ 0.18
CLDN4-201ENST00000340958 GIN1Q9NXP7 522 aa16.17■□□□□ 0.18
CLDN4-201ENST00000340958 GPN3Q9UHW5 284 aaPredicted RBP16.17■□□□□ 0.18
CLDN4-201ENST00000340958 A0A0G2JPF8 293 aa16.16■□□□□ 0.18
CLDN4-201ENST00000340958 HNRNPCL2B2RXH8 293 aa16.16■□□□□ 0.18
CLDN4-201ENST00000340958 HNRNPCL3B7ZW38 293 aa16.16■□□□□ 0.18
CLDN4-201ENST00000340958 MEN1O00255 615 aa16.16■□□□□ 0.18
CLDN4-201ENST00000340958 PRAMEF2O60811 474 aa16.16■□□□□ 0.18
CLDN4-201ENST00000340958 H6PDO95479 791 aa16.16■□□□□ 0.18
CLDN4-201ENST00000340958 CBX7O95931 251 aa16.16■□□□□ 0.18
CLDN4-201ENST00000340958 ZGLP1P0C6A0 271 aa16.16■□□□□ 0.18
CLDN4-201ENST00000340958 FTH1P19P0C7X4 201 aa16.16■□□□□ 0.18
CLDN4-201ENST00000340958 HNRNPCL4P0DMR1 293 aa16.16■□□□□ 0.18
CLDN4-201ENST00000340958 ZNF23P17027 643 aa16.16■□□□□ 0.18
CLDN4-201ENST00000340958 GABRA3P34903 492 aa16.16■□□□□ 0.18
CLDN4-201ENST00000340958 INSM1Q01101 510 aaPredicted RBP16.16■□□□□ 0.18
CLDN4-201ENST00000340958 DUSP5Q16690 384 aa16.16■□□□□ 0.18
CLDN4-201ENST00000340958 FAAH2Q6GMR7 532 aa16.16■□□□□ 0.18
CLDN4-201ENST00000340958 GALNT4Q8N4A0 578 aa16.16■□□□□ 0.18
CLDN4-201ENST00000340958 BMPERQ8N8U9 685 aa16.16■□□□□ 0.18
CLDN4-201ENST00000340958 DNAJC9Q8WXX5 260 aa16.16■□□□□ 0.18
CLDN4-201ENST00000340958 PROX1Q92786 737 aa16.16■□□□□ 0.18
CLDN4-201ENST00000340958 SDCCAG3Q96C92 435 aa16.16■□□□□ 0.18
CLDN4-201ENST00000340958 TRNT1Q96Q11 434 aaKnown RBP16.16■□□□□ 0.18
CLDN4-201ENST00000340958 VN1R1Q9GZP7 353 aa16.16■□□□□ 0.18
CLDN4-201ENST00000340958 PIGUQ9H490 435 aa16.16■□□□□ 0.18
CLDN4-201ENST00000340958 SOX17Q9H6I2 414 aaPredicted RBP16.16■□□□□ 0.18
CLDN4-201ENST00000340958 RUBCNLQ9H714 662 aa16.16■□□□□ 0.18
CLDN4-201ENST00000340958 C14orf105Q9NVL8 296 aa16.16■□□□□ 0.18
CLDN4-201ENST00000340958 SH3GLB1Q9Y371 365 aa16.16■□□□□ 0.18
CLDN4-201ENST00000340958 A8MVJ9 347 aa16.15■□□□□ 0.18
CLDN4-201ENST00000340958 E2F6O75461 281 aa16.15■□□□□ 0.18
CLDN4-201ENST00000340958 CHRM4P08173 479 aa16.15■□□□□ 0.18
CLDN4-201ENST00000340958 ADRB1P08588 477 aa16.15■□□□□ 0.18
CLDN4-201ENST00000340958 ACP2P11117 423 aa16.15■□□□□ 0.18
CLDN4-201ENST00000340958 GALNSP34059 522 aa16.15■□□□□ 0.18
CLDN4-201ENST00000340958 SOX18P35713 384 aa16.15■□□□□ 0.18
CLDN4-201ENST00000340958 CRYBA2P53672 197 aa16.15■□□□□ 0.18
CLDN4-201ENST00000340958 RHAGQ02094 409 aa16.15■□□□□ 0.18
CLDN4-201ENST00000340958 CYP27C1Q4G0S4 372 aa16.15■□□□□ 0.18
CLDN4-201ENST00000340958 DCAF12Q5T6F0 453 aa16.15■□□□□ 0.18
CLDN4-201ENST00000340958 ZBTB49Q6ZSB9 765 aa16.15■□□□□ 0.18
CLDN4-201ENST00000340958 MED25Q71SY5 747 aa16.15■□□□□ 0.18
CLDN4-201ENST00000340958 COX15Q7KZN9 410 aa16.15■□□□□ 0.18
CLDN4-201ENST00000340958 OLIG3Q7RTU3 272 aa16.15■□□□□ 0.18
CLDN4-201ENST00000340958 SLCO6A1Q86UG4 719 aa16.15■□□□□ 0.18
CLDN4-201ENST00000340958 LAPTM4BQ86VI4 370 aa16.15■□□□□ 0.18
CLDN4-201ENST00000340958 METTL21AQ8WXB1 218 aa16.15■□□□□ 0.18
CLDN4-201ENST00000340958 ZNF184Q99676 751 aaPredicted RBP16.15■□□□□ 0.18
CLDN4-201ENST00000340958 TGIF2Q9GZN2 237 aa16.15■□□□□ 0.18
CLDN4-201ENST00000340958 OR10A5Q9H207 317 aa16.15■□□□□ 0.18
CLDN4-201ENST00000340958 IL1RAPQ9NPH3 570 aa16.15■□□□□ 0.18
CLDN4-201ENST00000340958 SLC22A11Q9NSA0 550 aa16.15■□□□□ 0.18
CLDN4-201ENST00000340958 DNAJB9Q9UBS3 223 aa16.15■□□□□ 0.18
CLDN4-201ENST00000340958 CLDN16Q9Y5I7 305 aa16.15■□□□□ 0.18
CLDN4-201ENST00000340958 PRAMEF27A3QJZ7 478 aa16.15■□□□□ 0.18
CLDN4-201ENST00000340958 B4E171 279 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms