RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 RPS6KA2Q15349 733 aa9.72□□□□□ -0.85
ATXN3-201ENST00000340660 DMRTC1Q5HYR2 192 aa9.72□□□□□ -0.85
ATXN3-201ENST00000340660 AAGABQ6PD74 315 aa9.72□□□□□ -0.85
ATXN3-201ENST00000340660 SLC22A25Q6T423 547 aa9.72□□□□□ -0.85
ATXN3-201ENST00000340660 ANGPTL8Q6UXH0 198 aa9.72□□□□□ -0.85
ATXN3-201ENST00000340660 MEPCEQ7L2J0 689 aaKnown RBP9.72□□□□□ -0.85
ATXN3-201ENST00000340660 UBQLNLQ8IYU4 475 aa9.72□□□□□ -0.85
ATXN3-201ENST00000340660 PLD5Q8N7P1 536 aa9.72□□□□□ -0.85
ATXN3-201ENST00000340660 NANPQ8TBE9 248 aa9.72□□□□□ -0.85
ATXN3-201ENST00000340660 UTP15Q8TED0 518 aaKnown RBP9.72□□□□□ -0.85
ATXN3-201ENST00000340660 SMARCE1Q969G3 411 aa9.72□□□□□ -0.85
ATXN3-201ENST00000340660 ZNF48Q96MX3 618 aaPredicted RBP9.72□□□□□ -0.85
ATXN3-201ENST00000340660 OLFM3Q96PB7 478 aa9.72□□□□□ -0.85
ATXN3-201ENST00000340660 DGAT2Q96PD7 388 aa9.72□□□□□ -0.85
ATXN3-201ENST00000340660 FSD1LQ9BXM9 530 aa9.72□□□□□ -0.85
ATXN3-201ENST00000340660 HDHD5Q9BXW7 423 aa9.72□□□□□ -0.85
ATXN3-201ENST00000340660 FOLH1BQ9HBA9 442 aa9.72□□□□□ -0.85
ATXN3-201ENST00000340660 PLAC1Q9HBJ0 212 aa9.72□□□□□ -0.85
ATXN3-201ENST00000340660 AMFRQ9UKV5 643 aa9.72□□□□□ -0.85
ATXN3-201ENST00000340660 EMC9Q9Y3B6 208 aa9.72□□□□□ -0.85
ATXN3-201ENST00000340660 ZNF175Q9Y473 711 aa9.72□□□□□ -0.85
ATXN3-201ENST00000340660 HEY1Q9Y5J3 304 aa9.72□□□□□ -0.85
ATXN3-201ENST00000340660 MRFAP1Q9Y605 127 aa9.72□□□□□ -0.85
ATXN3-201ENST00000340660 C4orf51C9J302 202 aa9.71□□□□□ -0.86
ATXN3-201ENST00000340660 GAAP10253 952 aa9.71□□□□□ -0.86
ATXN3-201ENST00000340660 MSH2P43246 934 aa9.71□□□□□ -0.86
ATXN3-201ENST00000340660 SUCLG1P53597 346 aaKnown RBP9.71□□□□□ -0.86
ATXN3-201ENST00000340660 RAG2P55895 527 aa9.71□□□□□ -0.86
ATXN3-201ENST00000340660 RAB8AP61006 207 aa9.71□□□□□ -0.86
ATXN3-201ENST00000340660 WASHC5Q12768 1159 aa9.71□□□□□ -0.86
ATXN3-201ENST00000340660 MPP3Q13368 585 aa9.71□□□□□ -0.86
ATXN3-201ENST00000340660 RIN1Q13671 783 aa9.71□□□□□ -0.86
ATXN3-201ENST00000340660 ARHGAP19Q14CB8 494 aa9.71□□□□□ -0.86
ATXN3-201ENST00000340660 NIPAL1Q6NVV3 410 aa9.71□□□□□ -0.86
ATXN3-201ENST00000340660 SYT10Q6XYQ8 523 aa9.71□□□□□ -0.86
ATXN3-201ENST00000340660 GABRG1Q8N1C3 465 aa9.71□□□□□ -0.86
ATXN3-201ENST00000340660 MFSD9Q8NBP5 474 aa9.71□□□□□ -0.86
ATXN3-201ENST00000340660 OR51F2Q8NH61 342 aa9.71□□□□□ -0.86
ATXN3-201ENST00000340660 MUC7Q8TAX7 377 aa9.71□□□□□ -0.86
ATXN3-201ENST00000340660 ZNF480Q8WV37 535 aa9.71□□□□□ -0.86
ATXN3-201ENST00000340660 SFXN2Q96NB2 322 aa9.71□□□□□ -0.86
ATXN3-201ENST00000340660 FCRL5Q96RD9 977 aa9.71□□□□□ -0.86
ATXN3-201ENST00000340660 AGPAT1Q99943 283 aa9.71□□□□□ -0.86
ATXN3-201ENST00000340660 CARD6Q9BX69 1037 aa9.71□□□□□ -0.86
ATXN3-201ENST00000340660 CLK4Q9HAZ1 481 aaKnown RBP9.71□□□□□ -0.86
ATXN3-201ENST00000340660 FBXO34Q9NWN3 711 aa9.71□□□□□ -0.86
ATXN3-201ENST00000340660 TAS2R10Q9NYW0 307 aa9.71□□□□□ -0.86
ATXN3-201ENST00000340660 XPR1Q9UBH6 696 aa9.71□□□□□ -0.86
ATXN3-201ENST00000340660 TRAV20A0A0B4J274 112 aa9.7□□□□□ -0.86
ATXN3-201ENST00000340660 TMCO5BA8MYB1 307 aa9.7□□□□□ -0.86
ATXN3-201ENST00000340660 TP53I11O14683 189 aa9.7□□□□□ -0.86
ATXN3-201ENST00000340660 DHHO43323 396 aa9.7□□□□□ -0.86
ATXN3-201ENST00000340660 SMC2O95347 1197 aa9.7□□□□□ -0.86
ATXN3-201ENST00000340660 FGFR1OPO95684 399 aaKnown RBP9.7□□□□□ -0.86
ATXN3-201ENST00000340660 SLC16A8O95907 504 aa9.7□□□□□ -0.86
ATXN3-201ENST00000340660 CSF1P09603 554 aa9.7□□□□□ -0.86
ATXN3-201ENST00000340660 PIGHQ14442 188 aaPredicted RBP9.7□□□□□ -0.86
ATXN3-201ENST00000340660 BCL2A1Q16548 175 aa9.7□□□□□ -0.86
ATXN3-201ENST00000340660 ANKRD20A4Q4UJ75 823 aa9.7□□□□□ -0.86
ATXN3-201ENST00000340660 ANKRD20A2Q5SQ80 823 aa9.7□□□□□ -0.86
ATXN3-201ENST00000340660 ANKRD20A1Q5TYW2 823 aa9.7□□□□□ -0.86
ATXN3-201ENST00000340660 ANKRD20A3Q5VUR7 823 aa9.7□□□□□ -0.86
ATXN3-201ENST00000340660 NPNTQ6UXI9 565 aa9.7□□□□□ -0.86
ATXN3-201ENST00000340660 RANBP10Q6VN20 620 aa9.7□□□□□ -0.86
ATXN3-201ENST00000340660 OR4F5Q8NH21 305 aa9.7□□□□□ -0.86
ATXN3-201ENST00000340660 CLDND2Q8NHS1 167 aa9.7□□□□□ -0.86
ATXN3-201ENST00000340660 CDKN2AIPNLQ96HQ2 116 aa9.7□□□□□ -0.86
ATXN3-201ENST00000340660 TIGD1Q96MW7 591 aa9.7□□□□□ -0.86
ATXN3-201ENST00000340660 COL21A1Q96P44 957 aa9.7□□□□□ -0.86
ATXN3-201ENST00000340660 GORASP1Q9BQQ3 440 aa9.7□□□□□ -0.86
ATXN3-201ENST00000340660 FAM129AQ9BZQ8 928 aa9.7□□□□□ -0.86
ATXN3-201ENST00000340660 NDST4Q9H3R1 872 aa9.7□□□□□ -0.86
ATXN3-201ENST00000340660 COPS7AQ9UBW8 275 aa9.7□□□□□ -0.86
ATXN3-201ENST00000340660 U3KQK5 164 aa9.7□□□□□ -0.86
ATXN3-201ENST00000340660 CLPSL1A2RUU4 121 aa9.69□□□□□ -0.86
ATXN3-201ENST00000340660 HRKO00198 91 aa9.69□□□□□ -0.86
ATXN3-201ENST00000340660 SS18L1O75177 396 aaPredicted RBP9.69□□□□□ -0.86
ATXN3-201ENST00000340660 NTN1O95631 604 aa9.69□□□□□ -0.86
ATXN3-201ENST00000340660 NGFP01138 241 aa9.69□□□□□ -0.86
ATXN3-201ENST00000340660 IGKV3-11P04433 115 aa9.69□□□□□ -0.86
ATXN3-201ENST00000340660 TCEA1P23193 301 aaKnown RBP9.69□□□□□ -0.86
ATXN3-201ENST00000340660 ADRA1AP35348 466 aa9.69□□□□□ -0.86
ATXN3-201ENST00000340660 MTIF2P46199 727 aaKnown RBP9.69□□□□□ -0.86
ATXN3-201ENST00000340660 SLC6A8P48029 635 aa9.69□□□□□ -0.86
ATXN3-201ENST00000340660 PPA1Q15181 289 aa9.69□□□□□ -0.86
ATXN3-201ENST00000340660 TMED2Q15363 201 aa9.69□□□□□ -0.86
ATXN3-201ENST00000340660 THEMIS2Q5TEJ8 643 aa9.69□□□□□ -0.86
ATXN3-201ENST00000340660 SAXO2Q658L1 398 aa9.69□□□□□ -0.86
ATXN3-201ENST00000340660 FAM47BQ8NA70 645 aa9.69□□□□□ -0.86
ATXN3-201ENST00000340660 PHF21AQ96BD5 680 aa9.69□□□□□ -0.86
ATXN3-201ENST00000340660 FOPNLQ96NB1 174 aa9.69□□□□□ -0.86
ATXN3-201ENST00000340660 VRK1Q99986 396 aaPredicted RBP9.69□□□□□ -0.86
ATXN3-201ENST00000340660 B9D2Q9BPU9 175 aa9.69□□□□□ -0.86
ATXN3-201ENST00000340660 ACTR8Q9H981 624 aa9.69□□□□□ -0.86
ATXN3-201ENST00000340660 TCF7L1Q9HCS4 588 aa9.69□□□□□ -0.86
ATXN3-201ENST00000340660 NLE1Q9NVX2 485 aaPredicted RBP9.69□□□□□ -0.86
ATXN3-201ENST00000340660 CFAP45Q9UL16 551 aa9.69□□□□□ -0.86
ATXN3-201ENST00000340660 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.69□□□□□ -0.86
ATXN3-201ENST00000340660 SPACA6W5XKT8 324 aa9.69□□□□□ -0.86
ATXN3-201ENST00000340660 MYO1FO00160 1098 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms