RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 GCNT6Q5T4J0 391 aa17.71■□□□□ 0.43
PSPC1-201ENST00000338910 PRAMEF13Q5VWM6 474 aa17.71■□□□□ 0.43
PSPC1-201ENST00000338910 COMMD6Q7Z4G1 85 aa17.71■□□□□ 0.43
PSPC1-201ENST00000338910 WDR53Q7Z5U6 358 aaPredicted RBP17.71■□□□□ 0.43
PSPC1-201ENST00000338910 OR4A15Q8NGL6 344 aa17.71■□□□□ 0.43
PSPC1-201ENST00000338910 UPRTQ96BW1 309 aa17.71■□□□□ 0.43
PSPC1-201ENST00000338910 NELL2Q99435 816 aa17.71■□□□□ 0.43
PSPC1-201ENST00000338910 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.71■□□□□ 0.43
PSPC1-201ENST00000338910 TRIM45Q9H8W5 580 aaPredicted RBP17.71■□□□□ 0.43
PSPC1-201ENST00000338910 DMRT3Q9NQL9 472 aa17.71■□□□□ 0.43
PSPC1-201ENST00000338910 CLCA3PQ9Y6N3 262 aa17.71■□□□□ 0.43
PSPC1-201ENST00000338910 TICRRQ7Z2Z1 1910 aa17.71■□□□□ 0.43
PSPC1-201ENST00000338910 CKAP5Q14008 2032 aa17.71■□□□□ 0.43
PSPC1-201ENST00000338910 DNAH14Q0VDD8 3507 aa17.71■□□□□ 0.43
PSPC1-201ENST00000338910 FAM227AF5H4B4 570 aa17.7■□□□□ 0.42
PSPC1-201ENST00000338910 KELP23276 732 aa17.7■□□□□ 0.42
PSPC1-201ENST00000338910 SDC2P34741 201 aa17.7■□□□□ 0.42
PSPC1-201ENST00000338910 RBBP4Q09028 425 aa17.7■□□□□ 0.42
PSPC1-201ENST00000338910 MAB21L1Q13394 359 aa17.7■□□□□ 0.42
PSPC1-201ENST00000338910 FGL2Q14314 439 aa17.7■□□□□ 0.42
PSPC1-201ENST00000338910 ABI3BPQ7Z7G0 1075 aa17.7■□□□□ 0.42
PSPC1-201ENST00000338910 OR4M2Q8NGB6 313 aa17.7■□□□□ 0.42
PSPC1-201ENST00000338910 WDR48Q8TAF3 677 aa17.7■□□□□ 0.42
PSPC1-201ENST00000338910 SOSTQ9BQB4 213 aa17.7■□□□□ 0.42
PSPC1-201ENST00000338910 PPP1R3EQ9H7J1 279 aa17.7■□□□□ 0.42
PSPC1-201ENST00000338910 RHCGQ9UBD6 479 aa17.7■□□□□ 0.42
PSPC1-201ENST00000338910 REV1Q9UBZ9 1251 aa17.7■□□□□ 0.42
PSPC1-201ENST00000338910 EXO1Q9UQ84 846 aaKnown RBP17.7■□□□□ 0.42
PSPC1-201ENST00000338910 RPL36Q9Y3U8 105 aaKnown RBP17.7■□□□□ 0.42
PSPC1-201ENST00000338910 TEX51A0A1B0GUA7 166 aa17.7■□□□□ 0.42
PSPC1-201ENST00000338910 FOXE1O00358 373 aaPredicted RBP17.7■□□□□ 0.42
PSPC1-201ENST00000338910 MYL12BO14950 172 aa17.7■□□□□ 0.42
PSPC1-201ENST00000338910 TNRC18O15417 2968 aaPredicted RBP17.7■□□□□ 0.42
PSPC1-201ENST00000338910 LATO43561 262 aa17.7■□□□□ 0.42
PSPC1-201ENST00000338910 SLC2A2P11168 524 aaPredicted RBP17.7■□□□□ 0.42
PSPC1-201ENST00000338910 RHCEP18577 417 aa17.7■□□□□ 0.42
PSPC1-201ENST00000338910 MYL12AP19105 171 aa17.7■□□□□ 0.42
PSPC1-201ENST00000338910 POU3F3P20264 500 aaPredicted RBP17.7■□□□□ 0.42
PSPC1-201ENST00000338910 C5AR1P21730 350 aa17.7■□□□□ 0.42
PSPC1-201ENST00000338910 MC1RQ01726 317 aa17.7■□□□□ 0.42
PSPC1-201ENST00000338910 EEF1A2Q05639 463 aaKnown RBP17.7■□□□□ 0.42
PSPC1-201ENST00000338910 FOXD4Q12950 439 aaPredicted RBP17.7■□□□□ 0.42
PSPC1-201ENST00000338910 CRB2Q5IJ48 1285 aa17.7■□□□□ 0.42
PSPC1-201ENST00000338910 METRNLQ641Q3 311 aa17.7■□□□□ 0.42
PSPC1-201ENST00000338910 MZT2BQ6NZ67 158 aa17.7■□□□□ 0.42
PSPC1-201ENST00000338910 TDHQ8IZJ6 230 aa17.7■□□□□ 0.42
PSPC1-201ENST00000338910 C19orf18Q8NEA5 215 aa17.7■□□□□ 0.42
PSPC1-201ENST00000338910 OR4K1Q8NGD4 311 aa17.7■□□□□ 0.42
PSPC1-201ENST00000338910 MARVELD1Q9BSK0 173 aa17.7■□□□□ 0.42
PSPC1-201ENST00000338910 MED18Q9BUE0 208 aa17.7■□□□□ 0.42
PSPC1-201ENST00000338910 KATNB1Q9BVA0 655 aa17.7■□□□□ 0.42
PSPC1-201ENST00000338910 SLC6A17Q9H1V8 727 aa17.7■□□□□ 0.42
PSPC1-201ENST00000338910 ZNF576Q9H609 170 aa17.7■□□□□ 0.42
PSPC1-201ENST00000338910 NLKQ9UBE8 527 aa17.7■□□□□ 0.42
PSPC1-201ENST00000338910 EIF3KQ9UBQ5 218 aaKnown RBP17.7■□□□□ 0.42
PSPC1-201ENST00000338910 ZFR2Q9UPR6 939 aaKnown RBP17.7■□□□□ 0.42
PSPC1-201ENST00000338910 WASHC1A8K0Z3 465 aa17.69■□□□□ 0.42
PSPC1-201ENST00000338910 RNASET2O00584 256 aaKnown RBP17.69■□□□□ 0.42
PSPC1-201ENST00000338910 RECKO95980 971 aa17.69■□□□□ 0.42
PSPC1-201ENST00000338910 CLCNKAP51800 687 aa17.69■□□□□ 0.42
PSPC1-201ENST00000338910 RPA4Q13156 261 aa17.69■□□□□ 0.42
PSPC1-201ENST00000338910 IRF4Q15306 451 aa17.69■□□□□ 0.42
PSPC1-201ENST00000338910 TRIQKQ629K1 86 aa17.69■□□□□ 0.42
PSPC1-201ENST00000338910 DCUN1D3Q8IWE4 304 aa17.69■□□□□ 0.42
PSPC1-201ENST00000338910 Q8N402 240 aa17.69■□□□□ 0.42
PSPC1-201ENST00000338910 SETD7Q8WTS6 366 aaKnown RBP17.69■□□□□ 0.42
PSPC1-201ENST00000338910 TMEM203Q969S6 136 aa17.69■□□□□ 0.42
PSPC1-201ENST00000338910 QRFPRQ96P65 431 aa17.69■□□□□ 0.42
PSPC1-201ENST00000338910 TSSK6Q9BXA6 273 aa17.69■□□□□ 0.42
PSPC1-201ENST00000338910 TMEM38AQ9H6F2 299 aa17.69■□□□□ 0.42
PSPC1-201ENST00000338910 WDR26Q9H7D7 661 aa17.69■□□□□ 0.42
PSPC1-201ENST00000338910 C12orf10Q9HB07 376 aa17.69■□□□□ 0.42
PSPC1-201ENST00000338910 TAC3Q9UHF0 121 aa17.69■□□□□ 0.42
PSPC1-201ENST00000338910 ADH1BP00325 375 aa17.69■□□□□ 0.42
PSPC1-201ENST00000338910 KLK1P06870 262 aa17.69■□□□□ 0.42
PSPC1-201ENST00000338910 OSMP13725 252 aa17.69■□□□□ 0.42
PSPC1-201ENST00000338910 ARSBP15848 533 aa17.69■□□□□ 0.42
PSPC1-201ENST00000338910 CPEP16870 476 aa17.69■□□□□ 0.42
PSPC1-201ENST00000338910 TNFRSF4P43489 277 aa17.69■□□□□ 0.42
PSPC1-201ENST00000338910 FLYWCH1Q4VC44 716 aa17.69■□□□□ 0.42
PSPC1-201ENST00000338910 ZBTB37Q5TC79 503 aa17.69■□□□□ 0.42
PSPC1-201ENST00000338910 SDE2Q6IQ49 451 aa17.69■□□□□ 0.42
PSPC1-201ENST00000338910 TMIGD1Q6UXZ0 262 aa17.69■□□□□ 0.42
PSPC1-201ENST00000338910 ZNF730Q6ZMV8 503 aa17.69■□□□□ 0.42
PSPC1-201ENST00000338910 MTSS1LQ765P7 747 aa17.69■□□□□ 0.42
PSPC1-201ENST00000338910 SLC51BQ86UW2 128 aa17.69■□□□□ 0.42
PSPC1-201ENST00000338910 C9orf62Q8N4C0 152 aa17.69■□□□□ 0.42
PSPC1-201ENST00000338910 IL17RCQ8NAC3 791 aa17.69■□□□□ 0.42
PSPC1-201ENST00000338910 OR52N2Q8NGI0 321 aa17.69■□□□□ 0.42
PSPC1-201ENST00000338910 KCTD7Q96MP8 289 aa17.69■□□□□ 0.42
PSPC1-201ENST00000338910 TEX101Q9BY14 249 aa17.69■□□□□ 0.42
PSPC1-201ENST00000338910 OSGEPL1Q9H4B0 414 aa17.69■□□□□ 0.42
PSPC1-201ENST00000338910 C1GALT1Q9NS00 363 aa17.69■□□□□ 0.42
PSPC1-201ENST00000338910 KCND3Q9UK17 655 aa17.69■□□□□ 0.42
PSPC1-201ENST00000338910 NUP50Q9UKX7 468 aa17.69■□□□□ 0.42
PSPC1-201ENST00000338910 PCDHGB7Q9Y5F8 929 aa17.69■□□□□ 0.42
PSPC1-201ENST00000338910 FAM240BA0A1B0GVZ2 78 aa17.68■□□□□ 0.42
PSPC1-201ENST00000338910 LYRM1O43325 122 aa17.68■□□□□ 0.42
PSPC1-201ENST00000338910 SLC43A1O75387 559 aa17.68■□□□□ 0.42
PSPC1-201ENST00000338910 ADAP00813 363 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms