RNA–Protein interactions for RNA: ENST00000338850.5

RTN3-201, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-201ENST00000338850 ANGPTL8Q6UXH0 198 aa10.16□□□□□ -0.78
RTN3-201ENST00000338850 Q6ZPB1 254 aaPredicted RBP10.16□□□□□ -0.78
RTN3-201ENST00000338850 FAM83HQ6ZRV2 1179 aaPredicted RBP10.16□□□□□ -0.78
RTN3-201ENST00000338850 DSG4Q86SJ6 1040 aa10.16□□□□□ -0.78
RTN3-201ENST00000338850 AKAP14Q86UN6 197 aa10.16□□□□□ -0.78
RTN3-201ENST00000338850 TRAPPC5Q8IUR0 188 aa10.16□□□□□ -0.78
RTN3-201ENST00000338850 NAXDQ8IW45 347 aa10.16□□□□□ -0.78
RTN3-201ENST00000338850 RAB42Q8N4Z0 105 aa10.16□□□□□ -0.78
RTN3-201ENST00000338850 TBC1D19Q8N5T2 526 aa10.16□□□□□ -0.78
RTN3-201ENST00000338850 CLDN22Q8N7P3 220 aa10.16□□□□□ -0.78
RTN3-201ENST00000338850 GPR32P1Q8NGA4 272 aa10.16□□□□□ -0.78
RTN3-201ENST00000338850 OR5K2Q8NHB8 316 aa10.16□□□□□ -0.78
RTN3-201ENST00000338850 SLC38A5Q8WUX1 472 aa10.16□□□□□ -0.78
RTN3-201ENST00000338850 FGF11Q92914 225 aa10.16□□□□□ -0.78
RTN3-201ENST00000338850 ARRDC3Q96B67 414 aa10.16□□□□□ -0.78
RTN3-201ENST00000338850 TMEM19Q96HH6 336 aa10.16□□□□□ -0.78
RTN3-201ENST00000338850 COQ7Q99807 217 aa10.16□□□□□ -0.78
RTN3-201ENST00000338850 MENTQ9BUN1 341 aa10.16□□□□□ -0.78
RTN3-201ENST00000338850 PRRG3Q9BZD7 231 aa10.16□□□□□ -0.78
RTN3-201ENST00000338850 RSPH9Q9H1X1 276 aaPredicted RBP10.16□□□□□ -0.78
RTN3-201ENST00000338850 SPNS1Q9H2V7 528 aa10.16□□□□□ -0.78
RTN3-201ENST00000338850 MTG2Q9H4K7 406 aa10.16□□□□□ -0.78
RTN3-201ENST00000338850 IL21RQ9HBE5 538 aa10.16□□□□□ -0.78
RTN3-201ENST00000338850 HHATLQ9HCP6 504 aa10.16□□□□□ -0.78
RTN3-201ENST00000338850 FGF20Q9NP95 211 aaPredicted RBP10.16□□□□□ -0.78
RTN3-201ENST00000338850 KLHL3Q9UH77 587 aa10.16□□□□□ -0.78
RTN3-201ENST00000338850 KLK13Q9UKR3 277 aa10.16□□□□□ -0.78
RTN3-201ENST00000338850 ZMIZ1Q9ULJ6 1067 aa10.16□□□□□ -0.78
RTN3-201ENST00000338850 MSRB2Q9Y3D2 182 aa10.16□□□□□ -0.78
RTN3-201ENST00000338850 MAP4K5Q9Y4K4 846 aa10.16□□□□□ -0.78
RTN3-201ENST00000338850 PCDHGB2Q9Y5G2 931 aa10.16□□□□□ -0.78
RTN3-201ENST00000338850 HEATR5BQ9P2D3 2071 aa10.16□□□□□ -0.78
RTN3-201ENST00000338850 NUMA1Q14980 2115 aa10.15□□□□□ -0.78
RTN3-201ENST00000338850 A0A1B0GVT2 93 aa10.15□□□□□ -0.78
RTN3-201ENST00000338850 TMEM129A0AVI4 362 aa10.15□□□□□ -0.78
RTN3-201ENST00000338850 HTR3EA5X5Y0 456 aa10.15□□□□□ -0.78
RTN3-201ENST00000338850 TMEM8BA6NDV4 472 aa10.15□□□□□ -0.78
RTN3-201ENST00000338850 ANKDD1BA6NHY2 528 aa10.15□□□□□ -0.78
RTN3-201ENST00000338850 PDZK1P1A8MUH7 402 aa10.15□□□□□ -0.78
RTN3-201ENST00000338850 RGS13O14921 159 aa10.15□□□□□ -0.78
RTN3-201ENST00000338850 TBX1O43435 398 aa10.15□□□□□ -0.78
RTN3-201ENST00000338850 ASNA1O43681 348 aa10.15□□□□□ -0.78
RTN3-201ENST00000338850 GUCY1B2O75343 617 aa10.15□□□□□ -0.78
RTN3-201ENST00000338850 SEMA4FO95754 770 aa10.15□□□□□ -0.78
RTN3-201ENST00000338850 GASTP01350 101 aa10.15□□□□□ -0.78
RTN3-201ENST00000338850 DNTTP04053 509 aa10.15□□□□□ -0.78
RTN3-201ENST00000338850 ZNF883P0CG24 379 aa10.15□□□□□ -0.78
RTN3-201ENST00000338850 DBTP11182 482 aaKnown RBP10.15□□□□□ -0.78
RTN3-201ENST00000338850 PSMA1P25786 263 aaKnown RBP10.15□□□□□ -0.78
RTN3-201ENST00000338850 PPP2R1BP30154 601 aa10.15□□□□□ -0.78
RTN3-201ENST00000338850 OR1E2P47887 323 aa10.15□□□□□ -0.78
RTN3-201ENST00000338850 KHKP50053 298 aa10.15□□□□□ -0.78
RTN3-201ENST00000338850 LIM2P55344 173 aa10.15□□□□□ -0.78
RTN3-201ENST00000338850 EFNB1P98172 346 aa10.15□□□□□ -0.78
RTN3-201ENST00000338850 MC1RQ01726 317 aa10.15□□□□□ -0.78
RTN3-201ENST00000338850 SELENBP1Q13228 472 aa10.15□□□□□ -0.78
RTN3-201ENST00000338850 SF1Q15637 639 aaKnown RBP10.15□□□□□ -0.78
RTN3-201ENST00000338850 TRIP6Q15654 476 aaKnown RBP10.15□□□□□ -0.78
RTN3-201ENST00000338850 MAPK11Q15759 364 aa10.15□□□□□ -0.78
RTN3-201ENST00000338850 DUSP7Q16829 419 aa10.15□□□□□ -0.78
RTN3-201ENST00000338850 PRSS53Q2L4Q9 553 aa10.15□□□□□ -0.78
RTN3-201ENST00000338850 RAET1GQ6H3X3 334 aa10.15□□□□□ -0.78
RTN3-201ENST00000338850 KIAA1161Q6NSJ0 714 aa10.15□□□□□ -0.78
RTN3-201ENST00000338850 C1orf94Q6P1W5 598 aa10.15□□□□□ -0.78
RTN3-201ENST00000338850 CASP12Q6UXS9 341 aa10.15□□□□□ -0.78
RTN3-201ENST00000338850 ADGRF3Q8IZF5 1079 aa10.15□□□□□ -0.78
RTN3-201ENST00000338850 CYP4Z2PQ8N1L4 340 aa10.15□□□□□ -0.78
RTN3-201ENST00000338850 HORMAD2Q8N7B1 307 aa10.15□□□□□ -0.78
RTN3-201ENST00000338850 NANOGP1Q8N7R0 232 aa10.15□□□□□ -0.78
RTN3-201ENST00000338850 POC5Q8NA72 575 aa10.15□□□□□ -0.78
RTN3-201ENST00000338850 TOR1AIP2Q8NFQ8 470 aa10.15□□□□□ -0.78
RTN3-201ENST00000338850 WDR36Q8NI36 951 aaKnown RBP10.15□□□□□ -0.78
RTN3-201ENST00000338850 RGMAQ96B86 450 aa10.15□□□□□ -0.78
RTN3-201ENST00000338850 PRRC1Q96M27 445 aa10.15□□□□□ -0.78
RTN3-201ENST00000338850 SLC30A2Q9BRI3 323 aa10.15□□□□□ -0.78
RTN3-201ENST00000338850 CENPOQ9BU64 300 aa10.15□□□□□ -0.78
RTN3-201ENST00000338850 JAM3Q9BX67 310 aa10.15□□□□□ -0.78
RTN3-201ENST00000338850 C6orf62Q9GZU0 229 aaPredicted RBP10.15□□□□□ -0.78
RTN3-201ENST00000338850 NUAK2Q9H093 628 aa10.15□□□□□ -0.78
RTN3-201ENST00000338850 BTBD1Q9H0C5 482 aa10.15□□□□□ -0.78
RTN3-201ENST00000338850 OR2AG1Q9H205 316 aa10.15□□□□□ -0.78
RTN3-201ENST00000338850 OR51E2Q9H255 320 aa10.15□□□□□ -0.78
RTN3-201ENST00000338850 GAREM1Q9H706 876 aa10.15□□□□□ -0.78
RTN3-201ENST00000338850 SMURF1Q9HCE7 757 aa10.15□□□□□ -0.78
RTN3-201ENST00000338850 PRDM9Q9NQV7 894 aa10.15□□□□□ -0.78
RTN3-201ENST00000338850 ABCB10Q9NRK6 738 aa10.15□□□□□ -0.78
RTN3-201ENST00000338850 ACSL6Q9UKU0 697 aa10.15□□□□□ -0.78
RTN3-201ENST00000338850 ACSL5Q9ULC5 683 aa10.15□□□□□ -0.78
RTN3-201ENST00000338850 SLC9A8Q9Y2E8 581 aa10.15□□□□□ -0.78
RTN3-201ENST00000338850 PKD1L2Q7Z442 2459 aa10.15□□□□□ -0.78
RTN3-201ENST00000338850 KNL1Q8NG31 2342 aa10.15□□□□□ -0.79
RTN3-201ENST00000338850 ZFYVE26Q68DK2 2539 aa10.14□□□□□ -0.79
RTN3-201ENST00000338850 A0A0A6YYD5 115 aa10.14□□□□□ -0.79
RTN3-201ENST00000338850 FAM221BA6H8Z2 402 aa10.14□□□□□ -0.79
RTN3-201ENST00000338850 C1QTNF3-AMACRE9PGA6 284 aa10.14□□□□□ -0.79
RTN3-201ENST00000338850 J3KTA2 159 aa10.14□□□□□ -0.79
RTN3-201ENST00000338850 HMGN4O00479 90 aa10.14□□□□□ -0.79
RTN3-201ENST00000338850 KPNA3O00505 521 aaPredicted RBP10.14□□□□□ -0.79
RTN3-201ENST00000338850 SNPHO15079 494 aa10.14□□□□□ -0.79
RTN3-201ENST00000338850 ZZEF1O43149 2961 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms