RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 CLECL1Q8IZS7 167 aa11.16□□□□□ -0.62
HDAC6-201ENST00000334136 RAB8BQ92930 207 aa11.16□□□□□ -0.62
HDAC6-201ENST00000334136 NOTCH4Q99466 2003 aa11.16□□□□□ -0.62
HDAC6-201ENST00000334136 DUSP15Q9H1R2 295 aaPredicted RBP11.16□□□□□ -0.62
HDAC6-201ENST00000334136 C3orf14Q9HBI5 128 aa11.16□□□□□ -0.62
HDAC6-201ENST00000334136 TMEM9BQ9NQ34 198 aa11.16□□□□□ -0.62
HDAC6-201ENST00000334136 NUFIP1Q9UHK0 495 aaKnown RBP11.16□□□□□ -0.62
HDAC6-201ENST00000334136 CORINQ9Y5Q5 1042 aa11.16□□□□□ -0.62
HDAC6-201ENST00000334136 TRAV6A0A075B6T7 132 aa11.16□□□□□ -0.62
HDAC6-201ENST00000334136 LMO7DNF2Z398 122 aa11.16□□□□□ -0.62
HDAC6-201ENST00000334136 UPK1BO75841 260 aa11.16□□□□□ -0.62
HDAC6-201ENST00000334136 PDYNP01213 254 aa11.16□□□□□ -0.62
HDAC6-201ENST00000334136 BCHEP06276 602 aa11.16□□□□□ -0.62
HDAC6-201ENST00000334136 SAGP10523 405 aaPredicted RBP11.16□□□□□ -0.62
HDAC6-201ENST00000334136 RPL4P36578 427 aaKnown RBP11.16□□□□□ -0.62
HDAC6-201ENST00000334136 RGS8P57771 180 aaPredicted RBP11.16□□□□□ -0.62
HDAC6-201ENST00000334136 SPEM2Q0P670 501 aa11.16□□□□□ -0.62
HDAC6-201ENST00000334136 FGL2Q14314 439 aa11.16□□□□□ -0.62
HDAC6-201ENST00000334136 IKBIPQ70UQ0 350 aa11.16□□□□□ -0.62
HDAC6-201ENST00000334136 SPATC1Q76KD6 591 aa11.16□□□□□ -0.62
HDAC6-201ENST00000334136 HMGN2P46Q86SG4 172 aa11.16□□□□□ -0.62
HDAC6-201ENST00000334136 TSPYL5Q86VY4 417 aaPredicted RBP11.16□□□□□ -0.62
HDAC6-201ENST00000334136 ZNF548Q8NEK5 533 aaPredicted RBP11.16□□□□□ -0.62
HDAC6-201ENST00000334136 SGCDQ92629 289 aa11.16□□□□□ -0.62
HDAC6-201ENST00000334136 CNDP2Q96KP4 475 aaKnown RBP11.16□□□□□ -0.62
HDAC6-201ENST00000334136 ZFYVE21Q9BQ24 234 aa11.16□□□□□ -0.62
HDAC6-201ENST00000334136 TCEAL2Q9H3H9 227 aaPredicted RBP11.16□□□□□ -0.62
HDAC6-201ENST00000334136 EPHA6Q9UF33 1036 aa11.16□□□□□ -0.62
HDAC6-201ENST00000334136 ZNF860A6NHJ4 632 aa11.16□□□□□ -0.62
HDAC6-201ENST00000334136 BMP4P12644 408 aa11.16□□□□□ -0.62
HDAC6-201ENST00000334136 NME1P15531 152 aaKnown RBP11.16□□□□□ -0.62
HDAC6-201ENST00000334136 PSMB5P28074 263 aa11.16□□□□□ -0.62
HDAC6-201ENST00000334136 HTR2BP41595 481 aa11.16□□□□□ -0.62
HDAC6-201ENST00000334136 TAP2Q03519 686 aa11.16□□□□□ -0.62
HDAC6-201ENST00000334136 PRDX1Q06830 199 aaKnown RBP11.16□□□□□ -0.62
HDAC6-201ENST00000334136 ENPP2Q13822 863 aa11.16□□□□□ -0.62
HDAC6-201ENST00000334136 FZD2Q14332 565 aa11.16□□□□□ -0.62
HDAC6-201ENST00000334136 SBSNQ6UWP8 590 aa11.16□□□□□ -0.62
HDAC6-201ENST00000334136 WDR5BQ86VZ2 330 aa11.16□□□□□ -0.62
HDAC6-201ENST00000334136 KLHDC8BQ8IXV7 354 aa11.16□□□□□ -0.62
HDAC6-201ENST00000334136 OR10H4Q8NGA5 316 aa11.16□□□□□ -0.62
HDAC6-201ENST00000334136 OR2L8Q8NGY9 312 aa11.16□□□□□ -0.62
HDAC6-201ENST00000334136 CLDN23Q96B33 292 aa11.16□□□□□ -0.62
HDAC6-201ENST00000334136 MMABQ96EY8 250 aaPredicted RBP11.16□□□□□ -0.62
HDAC6-201ENST00000334136 OR2B2Q9GZK3 357 aa11.16□□□□□ -0.62
HDAC6-201ENST00000334136 SIAEQ9HAT2 523 aa11.16□□□□□ -0.62
HDAC6-201ENST00000334136 DIABLOQ9NR28 239 aa11.16□□□□□ -0.62
HDAC6-201ENST00000334136 OR10H1Q9Y4A9 318 aa11.16□□□□□ -0.62
HDAC6-201ENST00000334136 UNC13CQ8NB66 2214 aa11.15□□□□□ -0.62
HDAC6-201ENST00000334136 IMPA1P29218 277 aa11.15□□□□□ -0.62
HDAC6-201ENST00000334136 PFN3P60673 137 aa11.15□□□□□ -0.62
HDAC6-201ENST00000334136 ACY1Q03154 408 aa11.15□□□□□ -0.62
HDAC6-201ENST00000334136 MAB21L1Q13394 359 aa11.15□□□□□ -0.62
HDAC6-201ENST00000334136 COL9A2Q14055 689 aaPredicted RBP11.15□□□□□ -0.62
HDAC6-201ENST00000334136 CCSMST1Q4G0I0 132 aa11.15□□□□□ -0.62
HDAC6-201ENST00000334136 DEFB134Q4QY38 66 aa11.15□□□□□ -0.62
HDAC6-201ENST00000334136 TMEM207Q6UWW9 146 aa11.15□□□□□ -0.62
HDAC6-201ENST00000334136 Q6ZPB1 254 aaPredicted RBP11.15□□□□□ -0.62
HDAC6-201ENST00000334136 FBXO15Q8NCQ5 510 aaPredicted RBP11.15□□□□□ -0.62
HDAC6-201ENST00000334136 TEX37Q96LM6 180 aa11.15□□□□□ -0.62
HDAC6-201ENST00000334136 F2RL3Q96RI0 385 aa11.15□□□□□ -0.62
HDAC6-201ENST00000334136 SMOC1Q9H4F8 434 aa11.15□□□□□ -0.62
HDAC6-201ENST00000334136 MAT2BQ9NZL9 334 aa11.15□□□□□ -0.62
HDAC6-201ENST00000334136 CUL9Q8IWT3 2517 aa11.15□□□□□ -0.62
HDAC6-201ENST00000334136 TSC2P49815 1807 aa11.15□□□□□ -0.62
HDAC6-201ENST00000334136 ARHGAP33O14559 1287 aa11.15□□□□□ -0.62
HDAC6-201ENST00000334136 PIAS2O75928 621 aa11.15□□□□□ -0.62
HDAC6-201ENST00000334136 CA5AP35218 305 aa11.15□□□□□ -0.62
HDAC6-201ENST00000334136 GRM7Q14831 915 aa11.15□□□□□ -0.62
HDAC6-201ENST00000334136 C22orf42Q6IC83 251 aa11.15□□□□□ -0.62
HDAC6-201ENST00000334136 METTL2BQ6P1Q9 378 aaKnown RBP11.15□□□□□ -0.62
HDAC6-201ENST00000334136 CHMP1BQ7LBR1 199 aa11.15□□□□□ -0.62
HDAC6-201ENST00000334136 ABI3BPQ7Z7G0 1075 aa11.15□□□□□ -0.62
HDAC6-201ENST00000334136 CCDC28AQ8IWP9 274 aa11.15□□□□□ -0.62
HDAC6-201ENST00000334136 SAMD14Q8IZD0 417 aaPredicted RBP11.15□□□□□ -0.62
HDAC6-201ENST00000334136 TMEM151AQ8N4L1 468 aa11.15□□□□□ -0.62
HDAC6-201ENST00000334136 GEMIN6Q8WXD5 167 aaKnown RBP11.15□□□□□ -0.62
HDAC6-201ENST00000334136 SLC9A6Q92581 669 aa11.15□□□□□ -0.62
HDAC6-201ENST00000334136 SLCO4A1Q96BD0 722 aa11.15□□□□□ -0.62
HDAC6-201ENST00000334136 LINC00615Q96LM1 132 aaPredicted RBP11.15□□□□□ -0.62
HDAC6-201ENST00000334136 SLITRK2Q9H156 845 aa11.15□□□□□ -0.62
HDAC6-201ENST00000334136 MMP28Q9H239 520 aa11.15□□□□□ -0.62
HDAC6-201ENST00000334136 KIR3DX1Q9H7L2 352 aa11.15□□□□□ -0.62
HDAC6-201ENST00000334136 C12orf4Q9NQ89 552 aa11.15□□□□□ -0.62
HDAC6-201ENST00000334136 TAS2R7Q9NYW3 318 aa11.15□□□□□ -0.62
HDAC6-201ENST00000334136 ASCC3Q8N3C0 2202 aaKnown RBP11.15□□□□□ -0.62
HDAC6-201ENST00000334136 ARID1AO14497 2285 aa11.15□□□□□ -0.62
HDAC6-201ENST00000334136 PTPRDP23468 1912 aa11.15□□□□□ -0.62
HDAC6-201ENST00000334136 CTDSP2O14595 271 aa11.15□□□□□ -0.63
HDAC6-201ENST00000334136 TOXO94900 526 aa11.15□□□□□ -0.63
HDAC6-201ENST00000334136 C6orf47O95873 294 aa11.15□□□□□ -0.63
HDAC6-201ENST00000334136 CELP19835 753 aa11.15□□□□□ -0.63
HDAC6-201ENST00000334136 IDUAP35475 653 aa11.15□□□□□ -0.63
HDAC6-201ENST00000334136 NXPH1P58417 271 aa11.15□□□□□ -0.63
HDAC6-201ENST00000334136 GAS6Q14393 721 aa11.15□□□□□ -0.63
HDAC6-201ENST00000334136 TCTE1Q5JU00 501 aa11.15□□□□□ -0.63
HDAC6-201ENST00000334136 CEACAM20Q6UY09 585 aa11.15□□□□□ -0.63
HDAC6-201ENST00000334136 PRSS48Q7RTY5 328 aa11.15□□□□□ -0.63
HDAC6-201ENST00000334136 CADM3Q8N126 398 aa11.15□□□□□ -0.63
HDAC6-201ENST00000334136 PELI3Q8N2H9 469 aa11.15□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms