RNA–Protein interactions for RNA: ENST00000332797.10

CCDC28A-201, Transcript of coiled-coil domain containing 28A, humanhuman

TSL 1 (best) BASIC

Gene CCDC28A, Length 1,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28A-201ENST00000332797 WDR53Q7Z5U6 358 aaPredicted RBP14.65□□□□□ -0.06
CCDC28A-201ENST00000332797 ANKRD46Q86W74 232 aa14.65□□□□□ -0.06
CCDC28A-201ENST00000332797 SLC44A2Q8IWA5 706 aaPredicted RBP14.65□□□□□ -0.06
CCDC28A-201ENST00000332797 DND1Q8IYX4 353 aaKnown RBP14.65□□□□□ -0.06
CCDC28A-201ENST00000332797 CLECL1Q8IZS7 167 aa14.65□□□□□ -0.06
CCDC28A-201ENST00000332797 MIER2Q8N344 545 aa14.65□□□□□ -0.06
CCDC28A-201ENST00000332797 SGCZQ96LD1 299 aa14.65□□□□□ -0.06
CCDC28A-201ENST00000332797 CXorf36Q9H7Y0 433 aa14.65□□□□□ -0.06
CCDC28A-201ENST00000332797 NEUROD4Q9HD90 331 aa14.65□□□□□ -0.06
CCDC28A-201ENST00000332797 ZCCHC3Q9NUD5 404 aaKnown RBP14.65□□□□□ -0.06
CCDC28A-201ENST00000332797 ASF1BQ9NVP2 202 aa14.65□□□□□ -0.06
CCDC28A-201ENST00000332797 ZIM2Q9NZV7 527 aa14.65□□□□□ -0.06
CCDC28A-201ENST00000332797 GPR55Q9Y2T6 319 aaPredicted RBP14.65□□□□□ -0.06
CCDC28A-201ENST00000332797 KLF13Q9Y2Y9 288 aaPredicted RBP14.65□□□□□ -0.06
CCDC28A-201ENST00000332797 A0A0G2JND7 137 aa14.64□□□□□ -0.07
CCDC28A-201ENST00000332797 CAPN14A8MX76 684 aa14.64□□□□□ -0.07
CCDC28A-201ENST00000332797 G3V3Y1 287 aa14.64□□□□□ -0.07
CCDC28A-201ENST00000332797 RNASET2O00584 256 aaKnown RBP14.64□□□□□ -0.07
CCDC28A-201ENST00000332797 CT45A8P0DMV1 189 aa14.64□□□□□ -0.07
CCDC28A-201ENST00000332797 CT45A9P0DMV2 189 aa14.64□□□□□ -0.07
CCDC28A-201ENST00000332797 CCL3P10147 92 aa14.64□□□□□ -0.07
CCDC28A-201ENST00000332797 TROVE2P10155 538 aaKnown RBP eCLIP14.64□□□□□ -0.07
CCDC28A-201ENST00000332797 SOAT1P35610 550 aa14.64□□□□□ -0.07
CCDC28A-201ENST00000332797 DGKQP52824 942 aa14.64□□□□□ -0.07
CCDC28A-201ENST00000332797 FBXW4P57775 412 aa14.64□□□□□ -0.07
CCDC28A-201ENST00000332797 GPR85P60893 370 aa14.64□□□□□ -0.07
CCDC28A-201ENST00000332797 STX1BP61266 288 aa14.64□□□□□ -0.07
CCDC28A-201ENST00000332797 HBA1P69905 142 aa14.64□□□□□ -0.07
CCDC28A-201ENST00000332797 PRR5P85299 388 aa14.64□□□□□ -0.07
CCDC28A-201ENST00000332797 ZNHIT3Q15649 155 aaPredicted RBP14.64□□□□□ -0.07
CCDC28A-201ENST00000332797 NTRK2Q16620 822 aa14.64□□□□□ -0.07
CCDC28A-201ENST00000332797 CT45A2Q5DJT8 189 aa14.64□□□□□ -0.07
CCDC28A-201ENST00000332797 ANXA8L1Q5VT79 327 aa14.64□□□□□ -0.07
CCDC28A-201ENST00000332797 PNPLA5Q7Z6Z6 429 aaPredicted RBP14.64□□□□□ -0.07
CCDC28A-201ENST00000332797 SLC34A3Q8N130 599 aa14.64□□□□□ -0.07
CCDC28A-201ENST00000332797 GOLM1Q8NBJ4 401 aa14.64□□□□□ -0.07
CCDC28A-201ENST00000332797 FAM98AQ8NCA5 519 aaKnown RBP14.64□□□□□ -0.07
CCDC28A-201ENST00000332797 VPS37AQ8NEZ2 397 aa14.64□□□□□ -0.07
CCDC28A-201ENST00000332797 OR10G3Q8NGC4 313 aa14.64□□□□□ -0.07
CCDC28A-201ENST00000332797 OR4A15Q8NGL6 344 aa14.64□□□□□ -0.07
CCDC28A-201ENST00000332797 GRHL3Q8TE85 626 aa14.64□□□□□ -0.07
CCDC28A-201ENST00000332797 OMA1Q96E52 524 aa14.64□□□□□ -0.07
CCDC28A-201ENST00000332797 FAM120BQ96EK7 910 aaKnown RBP14.64□□□□□ -0.07
CCDC28A-201ENST00000332797 RILPQ96NA2 401 aa14.64□□□□□ -0.07
CCDC28A-201ENST00000332797 MS4A4EQ96PG1 132 aa14.64□□□□□ -0.07
CCDC28A-201ENST00000332797 TAAR6Q96RI8 345 aa14.64□□□□□ -0.07
CCDC28A-201ENST00000332797 SIKE1Q9BRV8 207 aa14.64□□□□□ -0.07
CCDC28A-201ENST00000332797 SDR39U1Q9NRG7 319 aaPredicted RBP14.64□□□□□ -0.07
CCDC28A-201ENST00000332797 SACM1LQ9NTJ5 587 aa14.64□□□□□ -0.07
CCDC28A-201ENST00000332797 RYDENQ9NUL5 291 aaKnown RBP14.64□□□□□ -0.07
CCDC28A-201ENST00000332797 OR10H1Q9Y4A9 318 aa14.64□□□□□ -0.07
CCDC28A-201ENST00000332797 PEX1O43933 1283 aa14.63□□□□□ -0.07
CCDC28A-201ENST00000332797 PPM1BO75688 479 aa14.63□□□□□ -0.07
CCDC28A-201ENST00000332797 P04436 131 aa14.63□□□□□ -0.07
CCDC28A-201ENST00000332797 CCT3P49368 545 aaKnown RBP14.63□□□□□ -0.07
CCDC28A-201ENST00000332797 MEOX1P50221 254 aa14.63□□□□□ -0.07
CCDC28A-201ENST00000332797 PHC1P78364 1004 aa14.63□□□□□ -0.07
CCDC28A-201ENST00000332797 PSG6Q00889 435 aa14.63□□□□□ -0.07
CCDC28A-201ENST00000332797 SF3A3Q12874 501 aaKnown RBP eCLIP14.63□□□□□ -0.07
CCDC28A-201ENST00000332797 PAOXQ6QHF9 649 aa14.63□□□□□ -0.07
CCDC28A-201ENST00000332797 SULF2Q8IWU5 870 aa14.63□□□□□ -0.07
CCDC28A-201ENST00000332797 CPSF7Q8N684 471 aaKnown RBP14.63□□□□□ -0.07
CCDC28A-201ENST00000332797 BCORP1Q8N888 145 aa14.63□□□□□ -0.07
CCDC28A-201ENST00000332797 GLB1L3Q8NCI6 653 aaPredicted RBP14.63□□□□□ -0.07
CCDC28A-201ENST00000332797 OR9I1Q8NGQ6 314 aa14.63□□□□□ -0.07
CCDC28A-201ENST00000332797 OR5AK3PQ8NH89 298 aa14.63□□□□□ -0.07
CCDC28A-201ENST00000332797 PSMA8Q8TAA3 256 aa14.63□□□□□ -0.07
CCDC28A-201ENST00000332797 FBXO30Q8TB52 745 aa14.63□□□□□ -0.07
CCDC28A-201ENST00000332797 TMBIM1Q969X1 311 aa14.63□□□□□ -0.07
CCDC28A-201ENST00000332797 FAM120CQ9NX05 1096 aaKnown RBP14.63□□□□□ -0.07
CCDC28A-201ENST00000332797 NTMQ9P121 344 aa14.63□□□□□ -0.07
CCDC28A-201ENST00000332797 PCDHGB4Q9UN71 923 aa14.63□□□□□ -0.07
CCDC28A-201ENST00000332797 GIMAP1-GIMAP5A0A087WTJ2 511 aa14.63□□□□□ -0.07
CCDC28A-201ENST00000332797 A0A0G2JMM0 328 aa14.63□□□□□ -0.07
CCDC28A-201ENST00000332797 PRSS51A0A1B0GVH4 220 aa14.63□□□□□ -0.07
CCDC28A-201ENST00000332797 A0A1W2PPB8 328 aa14.63□□□□□ -0.07
CCDC28A-201ENST00000332797 A0A1W2PRS3 328 aa14.63□□□□□ -0.07
CCDC28A-201ENST00000332797 KIR3DP1A8MWS1 328 aa14.63□□□□□ -0.07
CCDC28A-201ENST00000332797 KLRC4-KLRK1H3BQV0 150 aa14.63□□□□□ -0.07
CCDC28A-201ENST00000332797 TP53I11O14683 189 aa14.63□□□□□ -0.07
CCDC28A-201ENST00000332797 TO15178 435 aa14.63□□□□□ -0.07
CCDC28A-201ENST00000332797 SCN2BO60939 215 aa14.63□□□□□ -0.07
CCDC28A-201ENST00000332797 CPSF4O95639 269 aaKnown RBP14.63□□□□□ -0.07
CCDC28A-201ENST00000332797 PGRP06401 933 aa14.63□□□□□ -0.07
CCDC28A-201ENST00000332797 PLA2G2AP14555 144 aa14.63□□□□□ -0.07
CCDC28A-201ENST00000332797 KRT20P35900 424 aa14.63□□□□□ -0.07
CCDC28A-201ENST00000332797 TP53BP2Q13625 1128 aa14.63□□□□□ -0.07
CCDC28A-201ENST00000332797 IGFBP7Q16270 282 aa14.63□□□□□ -0.07
CCDC28A-201ENST00000332797 PRAMEF20Q5VT98 475 aa14.63□□□□□ -0.07
CCDC28A-201ENST00000332797 SLC22A10Q63ZE4 541 aa14.63□□□□□ -0.07
CCDC28A-201ENST00000332797 CGB2Q6NT52 195 aa14.63□□□□□ -0.07
CCDC28A-201ENST00000332797 OR4N2Q8NGD1 307 aa14.63□□□□□ -0.07
CCDC28A-201ENST00000332797 OR56A1Q8NGH5 318 aa14.63□□□□□ -0.07
CCDC28A-201ENST00000332797 SFXN5Q8TD22 340 aa14.63□□□□□ -0.07
CCDC28A-201ENST00000332797 PAQR8Q8TEZ7 354 aa14.63□□□□□ -0.07
CCDC28A-201ENST00000332797 STON2Q8WXE9 905 aa14.63□□□□□ -0.07
CCDC28A-201ENST00000332797 SLC9A6Q92581 669 aa14.63□□□□□ -0.07
CCDC28A-201ENST00000332797 GIMAP5Q96F15 307 aa14.63□□□□□ -0.07
CCDC28A-201ENST00000332797 OR52E6Q96RD3 313 aa14.63□□□□□ -0.07
CCDC28A-201ENST00000332797 LMF2Q9BU23 707 aaKnown RBP14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms