RNA–Protein interactions for RNA: ENST00000331456.6

TRAIP-201, Transcript of TRAF interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAIP, Length 2,028 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-201ENST00000331456 PLCL2Q9UPR0 1127 aa13.08□□□□□ -0.31
TRAIP-201ENST00000331456 MRPS33Q9Y291 106 aaKnown RBP13.08□□□□□ -0.31
TRAIP-201ENST00000331456 IFT52Q9Y366 437 aa13.08□□□□□ -0.31
TRAIP-201ENST00000331456 A0A1W2PRQ8 180 aa13.08□□□□□ -0.32
TRAIP-201ENST00000331456 FAM227AF5H4B4 570 aa13.08□□□□□ -0.32
TRAIP-201ENST00000331456 PIAS2O75928 621 aa13.08□□□□□ -0.32
TRAIP-201ENST00000331456 RNH1P13489 461 aaKnown RBP13.08□□□□□ -0.32
TRAIP-201ENST00000331456 PRKAR1BP31321 381 aa13.08□□□□□ -0.32
TRAIP-201ENST00000331456 IFNA8P32881 189 aa13.08□□□□□ -0.32
TRAIP-201ENST00000331456 CDC42P60953 191 aa13.08□□□□□ -0.32
TRAIP-201ENST00000331456 LSAMPQ13449 338 aa13.08□□□□□ -0.32
TRAIP-201ENST00000331456 DGCR6Q14129 220 aa13.08□□□□□ -0.32
TRAIP-201ENST00000331456 ARHGAP11BQ3KRB8 267 aa13.08□□□□□ -0.32
TRAIP-201ENST00000331456 TRMT12Q53H54 448 aaKnown RBP13.08□□□□□ -0.32
TRAIP-201ENST00000331456 FHL5Q5TD97 284 aa13.08□□□□□ -0.32
TRAIP-201ENST00000331456 XAF1Q6GPH4 301 aa13.08□□□□□ -0.32
TRAIP-201ENST00000331456 DHRS4L2Q6PKH6 230 aa13.08□□□□□ -0.32
TRAIP-201ENST00000331456 CCDC71Q8IV32 467 aaPredicted RBP13.08□□□□□ -0.32
TRAIP-201ENST00000331456 ARHGEF39Q8N4T4 335 aa13.08□□□□□ -0.32
TRAIP-201ENST00000331456 CDRT4Q8N9R6 151 aa13.08□□□□□ -0.32
TRAIP-201ENST00000331456 ZNF540Q8NDQ6 660 aa13.08□□□□□ -0.32
TRAIP-201ENST00000331456 OR13F1Q8NGS4 319 aa13.08□□□□□ -0.32
TRAIP-201ENST00000331456 ISOC1Q96CN7 298 aa13.08□□□□□ -0.32
TRAIP-201ENST00000331456 TGM7Q96PF1 710 aa13.08□□□□□ -0.32
TRAIP-201ENST00000331456 CD180Q99467 661 aa13.08□□□□□ -0.32
TRAIP-201ENST00000331456 RAB33BQ9H082 229 aa13.08□□□□□ -0.32
TRAIP-201ENST00000331456 PIGUQ9H490 435 aa13.08□□□□□ -0.32
TRAIP-201ENST00000331456 DUSP21Q9H596 190 aa13.08□□□□□ -0.32
TRAIP-201ENST00000331456 PDE7BQ9NP56 450 aa13.08□□□□□ -0.32
TRAIP-201ENST00000331456 ADAP2Q9NPF8 381 aa13.08□□□□□ -0.32
TRAIP-201ENST00000331456 IRAK4Q9NWZ3 460 aa13.08□□□□□ -0.32
TRAIP-201ENST00000331456 IMPAD1Q9NX62 359 aa13.08□□□□□ -0.32
TRAIP-201ENST00000331456 ZNF232Q9UNY5 417 aa13.08□□□□□ -0.32
TRAIP-201ENST00000331456 RNF6Q9Y252 685 aa13.08□□□□□ -0.32
TRAIP-201ENST00000331456 A0A0A6YYC8 382 aaPredicted RBP13.07□□□□□ -0.32
TRAIP-201ENST00000331456 I3L1I5 382 aaPredicted RBP13.07□□□□□ -0.32
TRAIP-201ENST00000331456 K7ESF4 209 aa13.07□□□□□ -0.32
TRAIP-201ENST00000331456 PCDHGA12O60330 932 aa13.07□□□□□ -0.32
TRAIP-201ENST00000331456 OR10H2O60403 315 aa13.07□□□□□ -0.32
TRAIP-201ENST00000331456 DCNP07585 359 aaKnown RBP13.07□□□□□ -0.32
TRAIP-201ENST00000331456 HTR1AP08908 422 aa13.07□□□□□ -0.32
TRAIP-201ENST00000331456 SLC35E2P0CK97 266 aa13.07□□□□□ -0.32
TRAIP-201ENST00000331456 ACP2P11117 423 aa13.07□□□□□ -0.32
TRAIP-201ENST00000331456 DCKP27707 260 aa13.07□□□□□ -0.32
TRAIP-201ENST00000331456 SLC5A2P31639 672 aa13.07□□□□□ -0.32
TRAIP-201ENST00000331456 IDH2P48735 452 aaKnown RBP13.07□□□□□ -0.32
TRAIP-201ENST00000331456 PDX1P52945 283 aa13.07□□□□□ -0.32
TRAIP-201ENST00000331456 CRISP1P54107 249 aa13.07□□□□□ -0.32
TRAIP-201ENST00000331456 TEKQ02763 1124 aa13.07□□□□□ -0.32
TRAIP-201ENST00000331456 PIN1Q13526 163 aaPredicted RBP13.07□□□□□ -0.32
TRAIP-201ENST00000331456 FAM53BQ14153 422 aa13.07□□□□□ -0.32
TRAIP-201ENST00000331456 TCTE1Q5JU00 501 aa13.07□□□□□ -0.32
TRAIP-201ENST00000331456 GARNL3Q5VVW2 1013 aa13.07□□□□□ -0.32
TRAIP-201ENST00000331456 GPR107Q5VW38 600 aa13.07□□□□□ -0.32
TRAIP-201ENST00000331456 MLIPQ5VWP3 458 aa13.07□□□□□ -0.32
TRAIP-201ENST00000331456 KLHL17Q6TDP4 642 aa13.07□□□□□ -0.32
TRAIP-201ENST00000331456 WDR53Q7Z5U6 358 aaPredicted RBP13.07□□□□□ -0.32
TRAIP-201ENST00000331456 HMGN2P46Q86SG4 172 aa13.07□□□□□ -0.32
TRAIP-201ENST00000331456 ERI1Q8IV48 349 aaKnown RBP13.07□□□□□ -0.32
TRAIP-201ENST00000331456 PEX5LQ8IYB4 626 aa13.07□□□□□ -0.32
TRAIP-201ENST00000331456 SVOPQ8N4V2 548 aa13.07□□□□□ -0.32
TRAIP-201ENST00000331456 OR6T1Q8NGN1 323 aa13.07□□□□□ -0.32
TRAIP-201ENST00000331456 OR52P1PQ8NH57 321 aa13.07□□□□□ -0.32
TRAIP-201ENST00000331456 ZFAND2BQ8WV99 257 aa13.07□□□□□ -0.32
TRAIP-201ENST00000331456 SGCDQ92629 289 aa13.07□□□□□ -0.32
TRAIP-201ENST00000331456 ANKRD9Q96BM1 317 aaPredicted RBP13.07□□□□□ -0.32
TRAIP-201ENST00000331456 AHCYL2Q96HN2 611 aaKnown RBP13.07□□□□□ -0.32
TRAIP-201ENST00000331456 ARHGDIGQ99819 225 aa13.07□□□□□ -0.32
TRAIP-201ENST00000331456 PAK1IP1Q9NWT1 392 aaPredicted RBP13.07□□□□□ -0.32
TRAIP-201ENST00000331456 TMEM9Q9P0T7 183 aa13.07□□□□□ -0.32
TRAIP-201ENST00000331456 WDR45Q9Y484 360 aa13.07□□□□□ -0.32
TRAIP-201ENST00000331456 PCDHGB1Q9Y5G3 927 aa13.07□□□□□ -0.32
TRAIP-201ENST00000331456 TMEM131Q92545 1883 aa13.07□□□□□ -0.32
TRAIP-201ENST00000331456 CCDC88CQ9P219 2028 aa13.07□□□□□ -0.32
TRAIP-201ENST00000331456 SH3PXD2BA1X283 911 aa13.06□□□□□ -0.32
TRAIP-201ENST00000331456 RGS10O43665 173 aa13.06□□□□□ -0.32
TRAIP-201ENST00000331456 SEMA7AO75326 666 aa13.06□□□□□ -0.32
TRAIP-201ENST00000331456 WBP4O75554 376 aaKnown RBP13.06□□□□□ -0.32
TRAIP-201ENST00000331456 TRMUO75648 421 aaKnown RBP13.06□□□□□ -0.32
TRAIP-201ENST00000331456 SEC14L2O76054 403 aa13.06□□□□□ -0.32
TRAIP-201ENST00000331456 SOX30O94993 753 aa13.06□□□□□ -0.32
TRAIP-201ENST00000331456 ITIH1P19827 911 aa13.06□□□□□ -0.32
TRAIP-201ENST00000331456 KRT20P35900 424 aa13.06□□□□□ -0.32
TRAIP-201ENST00000331456 GSSP48637 474 aa13.06□□□□□ -0.32
TRAIP-201ENST00000331456 SLC35A2P78381 396 aa13.06□□□□□ -0.32
TRAIP-201ENST00000331456 PIGFQ07326 219 aa13.06□□□□□ -0.32
TRAIP-201ENST00000331456 LARS2Q15031 903 aaKnown RBP13.06□□□□□ -0.32
TRAIP-201ENST00000331456 NPTX1Q15818 432 aa13.06□□□□□ -0.32
TRAIP-201ENST00000331456 DUSP5Q16690 384 aa13.06□□□□□ -0.32
TRAIP-201ENST00000331456 PRICKLE4Q2TBC4 344 aa13.06□□□□□ -0.32
TRAIP-201ENST00000331456 FRRS1Q6ZNA5 592 aa13.06□□□□□ -0.32
TRAIP-201ENST00000331456 Q6ZPB1 254 aaPredicted RBP13.06□□□□□ -0.32
TRAIP-201ENST00000331456 COMTD1Q86VU5 262 aa13.06□□□□□ -0.32
TRAIP-201ENST00000331456 VRK2Q86Y07 508 aa13.06□□□□□ -0.32
TRAIP-201ENST00000331456 OR6C4Q8NGE1 309 aa13.06□□□□□ -0.32
TRAIP-201ENST00000331456 FKBP10Q96AY3 582 aa13.06□□□□□ -0.32
TRAIP-201ENST00000331456 STACQ99469 402 aa13.06□□□□□ -0.32
TRAIP-201ENST00000331456 WFDC6Q9BQY6 131 aa13.06□□□□□ -0.32
TRAIP-201ENST00000331456 DGCR6LQ9BY27 220 aa13.06□□□□□ -0.32
TRAIP-201ENST00000331456 CHRNA10Q9GZZ6 450 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms