RNA–Protein interactions for RNA: ENST00000321728.11

PRKCB-202, Transcript of protein kinase C beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRKCB, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-202ENST00000321728 CCT3P49368 545 aaKnown RBP16.86■□□□□ 0.29
PRKCB-202ENST00000321728 DCDC1P59894 354 aa16.86■□□□□ 0.29
PRKCB-202ENST00000321728 MAP4K2Q12851 820 aa16.86■□□□□ 0.29
PRKCB-202ENST00000321728 KIAA1211LQ6NV74 962 aa16.86■□□□□ 0.29
PRKCB-202ENST00000321728 SLC27A4Q6P1M0 643 aa16.86■□□□□ 0.29
PRKCB-202ENST00000321728 COMTD1Q86VU5 262 aa16.86■□□□□ 0.29
PRKCB-202ENST00000321728 ZNF366Q8N895 744 aa16.86■□□□□ 0.29
PRKCB-202ENST00000321728 ZNF740Q8NDX6 193 aa16.86■□□□□ 0.29
PRKCB-202ENST00000321728 DBF4BQ8NFT6 615 aa16.86■□□□□ 0.29
PRKCB-202ENST00000321728 TREX2Q9BQ50 279 aaPredicted RBP16.86■□□□□ 0.29
PRKCB-202ENST00000321728 EFCAB11Q9BUY7 163 aa16.86■□□□□ 0.29
PRKCB-202ENST00000321728 PRR14Q9BWN1 585 aa16.86■□□□□ 0.29
PRKCB-202ENST00000321728 SYNDIG1Q9H7V2 258 aa16.86■□□□□ 0.29
PRKCB-202ENST00000321728 SLAMF7Q9NQ25 335 aa16.86■□□□□ 0.29
PRKCB-202ENST00000321728 CACNG2Q9Y698 323 aa16.86■□□□□ 0.29
PRKCB-202ENST00000321728 HMGN4O00479 90 aa16.86■□□□□ 0.29
PRKCB-202ENST00000321728 TSPAN4O14817 238 aa16.86■□□□□ 0.29
PRKCB-202ENST00000321728 NPC1O15118 1278 aa16.86■□□□□ 0.29
PRKCB-202ENST00000321728 IFNA7P01567 189 aa16.86■□□□□ 0.29
PRKCB-202ENST00000321728 C1GALT1C1LP0DN25 315 aa16.86■□□□□ 0.29
PRKCB-202ENST00000321728 TFPIP10646 304 aa16.86■□□□□ 0.29
PRKCB-202ENST00000321728 ATP6V1E1P36543 226 aa16.86■□□□□ 0.29
PRKCB-202ENST00000321728 CTSCP53634 463 aa16.86■□□□□ 0.29
PRKCB-202ENST00000321728 CDH11P55287 796 aa16.86■□□□□ 0.29
PRKCB-202ENST00000321728 EXOSC2Q13868 293 aaKnown RBP16.86■□□□□ 0.29
PRKCB-202ENST00000321728 AANATQ16613 207 aa16.86■□□□□ 0.29
PRKCB-202ENST00000321728 FAM26DQ5JW98 314 aa16.86■□□□□ 0.29
PRKCB-202ENST00000321728 KIAA1161Q6NSJ0 714 aa16.86■□□□□ 0.29
PRKCB-202ENST00000321728 CD300LDQ6UXZ3 194 aa16.86■□□□□ 0.29
PRKCB-202ENST00000321728 OLIG3Q7RTU3 272 aa16.86■□□□□ 0.29
PRKCB-202ENST00000321728 IFNL1Q8IU54 200 aa16.86■□□□□ 0.29
PRKCB-202ENST00000321728 ECHDC3Q96DC8 303 aa16.86■□□□□ 0.29
PRKCB-202ENST00000321728 SLC38A2Q96QD8 506 aa16.86■□□□□ 0.29
PRKCB-202ENST00000321728 OR51J1Q9H342 316 aa16.86■□□□□ 0.29
PRKCB-202ENST00000321728 GHITMQ9H3K2 345 aa16.86■□□□□ 0.29
PRKCB-202ENST00000321728 RRAGCQ9HB90 399 aa16.86■□□□□ 0.29
PRKCB-202ENST00000321728 SLCO1C1Q9NYB5 712 aa16.86■□□□□ 0.29
PRKCB-202ENST00000321728 C5AR2Q9P296 337 aa16.86■□□□□ 0.29
PRKCB-202ENST00000321728 LOC105369274A0A096LPK9 316 aa16.85■□□□□ 0.29
PRKCB-202ENST00000321728 MMP20O60882 483 aa16.85■□□□□ 0.29
PRKCB-202ENST00000321728 CH25HO95992 272 aa16.85■□□□□ 0.29
PRKCB-202ENST00000321728 ALDH1A1P00352 501 aa16.85■□□□□ 0.29
PRKCB-202ENST00000321728 SYPP08247 313 aa16.85■□□□□ 0.29
PRKCB-202ENST00000321728 DDCP20711 480 aa16.85■□□□□ 0.29
PRKCB-202ENST00000321728 SRP9P49458 86 aaKnown RBP16.85■□□□□ 0.29
PRKCB-202ENST00000321728 SRP54P61011 504 aaKnown RBP16.85■□□□□ 0.29
PRKCB-202ENST00000321728 DSG2Q14126 1118 aa16.85■□□□□ 0.29
PRKCB-202ENST00000321728 GRK1Q15835 563 aa16.85■□□□□ 0.29
PRKCB-202ENST00000321728 SYPL1Q16563 259 aa16.85■□□□□ 0.29
PRKCB-202ENST00000321728 GPR139Q6DWJ6 353 aa16.85■□□□□ 0.29
PRKCB-202ENST00000321728 TMEM91Q6ZNR0 172 aa16.85■□□□□ 0.29
PRKCB-202ENST00000321728 Q6ZVL8 140 aa16.85■□□□□ 0.29
PRKCB-202ENST00000321728 OR4N4Q8N0Y3 316 aa16.85■□□□□ 0.29
PRKCB-202ENST00000321728 ARL14EPQ8N8R7 260 aaPredicted RBP16.85■□□□□ 0.29
PRKCB-202ENST00000321728 VOPP1Q96AW1 172 aa16.85■□□□□ 0.29
PRKCB-202ENST00000321728 SORCS2Q96PQ0 1159 aa16.85■□□□□ 0.29
PRKCB-202ENST00000321728 ABCG4Q9H172 646 aa16.85■□□□□ 0.29
PRKCB-202ENST00000321728 PTGFRNQ9P2B2 879 aa16.85■□□□□ 0.29
PRKCB-202ENST00000321728 ZFR2Q9UPR6 939 aaKnown RBP16.85■□□□□ 0.29
PRKCB-202ENST00000321728 ITM2BQ9Y287 266 aa16.85■□□□□ 0.29
PRKCB-202ENST00000321728 TMEM88BA6NKF7 163 aa16.85■□□□□ 0.29
PRKCB-202ENST00000321728 CTRB1P17538 263 aa16.85■□□□□ 0.29
PRKCB-202ENST00000321728 RAB14P61106 215 aa16.85■□□□□ 0.29
PRKCB-202ENST00000321728 ELAVL2Q12926 359 aaKnown RBP16.85■□□□□ 0.29
PRKCB-202ENST00000321728 TCTN1Q2MV58 587 aa16.85■□□□□ 0.29
PRKCB-202ENST00000321728 CTRB2Q6GPI1 263 aa16.85■□□□□ 0.29
PRKCB-202ENST00000321728 C1orf94Q6P1W5 598 aa16.85■□□□□ 0.29
PRKCB-202ENST00000321728 KLBQ86Z14 1044 aa16.85■□□□□ 0.29
PRKCB-202ENST00000321728 KLHL36Q8N4N3 616 aa16.85■□□□□ 0.29
PRKCB-202ENST00000321728 SAMD12Q8N8I0 201 aa16.85■□□□□ 0.29
PRKCB-202ENST00000321728 ZNF485Q8NCK3 441 aa16.85■□□□□ 0.29
PRKCB-202ENST00000321728 CEP76Q8TAP6 659 aa16.85■□□□□ 0.29
PRKCB-202ENST00000321728 SPRYD4Q8WW59 207 aaPredicted RBP16.85■□□□□ 0.29
PRKCB-202ENST00000321728 SCMH1Q96GD3 660 aa16.85■□□□□ 0.29
PRKCB-202ENST00000321728 SECISBP2Q96T21 854 aaKnown RBP16.85■□□□□ 0.29
PRKCB-202ENST00000321728 UBQLN2Q9UHD9 624 aa16.85■□□□□ 0.29
PRKCB-202ENST00000321728 MYOFQ9NZM1 2061 aa16.85■□□□□ 0.29
PRKCB-202ENST00000321728 TEX13CA0A0J9YWL9 993 aa16.84■□□□□ 0.29
PRKCB-202ENST00000321728 GSAPA4D1B5 854 aa16.84■□□□□ 0.29
PRKCB-202ENST00000321728 CHST10O43529 356 aa16.84■□□□□ 0.29
PRKCB-202ENST00000321728 TAP2Q03519 686 aa16.84■□□□□ 0.29
PRKCB-202ENST00000321728 GALEQ14376 348 aa16.84■□□□□ 0.29
PRKCB-202ENST00000321728 HSD11B1LQ7Z5J1 315 aa16.84■□□□□ 0.29
PRKCB-202ENST00000321728 XAGE5Q8WWM1 108 aa16.84■□□□□ 0.29
PRKCB-202ENST00000321728 ACOT12Q8WYK0 555 aa16.84■□□□□ 0.29
PRKCB-202ENST00000321728 DPAGT1Q9H3H5 408 aa16.84■□□□□ 0.29
PRKCB-202ENST00000321728 MAN2C1Q9NTJ4 1040 aa16.84■□□□□ 0.29
PRKCB-202ENST00000321728 ICKQ9UPZ9 632 aa16.84■□□□□ 0.29
PRKCB-202ENST00000321728 C7orf66A4D0T2 115 aa16.84■□□□□ 0.29
PRKCB-202ENST00000321728 ETV3P41162 512 aa16.84■□□□□ 0.29
PRKCB-202ENST00000321728 MLLT1Q03111 559 aaPredicted RBP16.84■□□□□ 0.29
PRKCB-202ENST00000321728 GPR162Q16538 588 aa16.84■□□□□ 0.29
PRKCB-202ENST00000321728 TXNDC8Q6A555 127 aa16.84■□□□□ 0.29
PRKCB-202ENST00000321728 KCTD20Q7Z5Y7 419 aa16.84■□□□□ 0.29
PRKCB-202ENST00000321728 KLHDC8AQ8IYD2 350 aa16.84■□□□□ 0.29
PRKCB-202ENST00000321728 OR5M3Q8NGP4 307 aa16.84■□□□□ 0.29
PRKCB-202ENST00000321728 CASD1Q96PB1 797 aa16.84■□□□□ 0.29
PRKCB-202ENST00000321728 RIOK2Q9BVS4 552 aaKnown RBP16.84■□□□□ 0.29
PRKCB-202ENST00000321728 PPIL1Q9Y3C6 166 aa16.84■□□□□ 0.29
PRKCB-202ENST00000321728 GOLGA4Q13439 2230 aaKnown RBP16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms