RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 CES1P1Q9UKY3 287 aa12.96□□□□□ -0.33
RPP40-201ENST00000319533 OR7A17O14581 309 aa12.95□□□□□ -0.34
RPP40-201ENST00000319533 TMIGD3P0DMS9 266 aaPredicted RBP12.95□□□□□ -0.34
RPP40-201ENST00000319533 PORP16435 677 aaPredicted RBP12.95□□□□□ -0.34
RPP40-201ENST00000319533 SOX18P35713 384 aa12.95□□□□□ -0.34
RPP40-201ENST00000319533 SLCO1A2P46721 670 aa12.95□□□□□ -0.34
RPP40-201ENST00000319533 AGFG1P52594 562 aaKnown RBP12.95□□□□□ -0.34
RPP40-201ENST00000319533 KEAP1Q14145 624 aa12.95□□□□□ -0.34
RPP40-201ENST00000319533 RCAN2Q14206 197 aa12.95□□□□□ -0.34
RPP40-201ENST00000319533 PRICKLE4Q2TBC4 344 aa12.95□□□□□ -0.34
RPP40-201ENST00000319533 PRR22Q8IZ63 422 aa12.95□□□□□ -0.34
RPP40-201ENST00000319533 WFDC11Q8NEX6 87 aa12.95□□□□□ -0.34
RPP40-201ENST00000319533 TRPC4APQ8TEL6 797 aa12.95□□□□□ -0.34
RPP40-201ENST00000319533 NTMT1Q9BV86 223 aa12.95□□□□□ -0.34
RPP40-201ENST00000319533 SFXN3Q9BWM7 321 aa12.95□□□□□ -0.34
RPP40-201ENST00000319533 OR2B2Q9GZK3 357 aa12.95□□□□□ -0.34
RPP40-201ENST00000319533 CFL2Q9Y281 166 aa12.95□□□□□ -0.34
RPP40-201ENST00000319533 DTX4Q9Y2E6 619 aa12.95□□□□□ -0.34
RPP40-201ENST00000319533 MED12Q93074 2177 aa12.95□□□□□ -0.34
RPP40-201ENST00000319533 A0A1W2PPR1 153 aa12.94□□□□□ -0.34
RPP40-201ENST00000319533 EEF1E1-BLOC1S5C9J1V9 151 aa12.94□□□□□ -0.34
RPP40-201ENST00000319533 GNB5O14775 395 aa12.94□□□□□ -0.34
RPP40-201ENST00000319533 ACOX3O15254 700 aa12.94□□□□□ -0.34
RPP40-201ENST00000319533 EEF1E1O43324 174 aaKnown RBP12.94□□□□□ -0.34
RPP40-201ENST00000319533 ICOSLGO75144 302 aa12.94□□□□□ -0.34
RPP40-201ENST00000319533 RCBTB2O95199 551 aa12.94□□□□□ -0.34
RPP40-201ENST00000319533 ATP1B1P05026 303 aa12.94□□□□□ -0.34
RPP40-201ENST00000319533 KLK1P06870 262 aa12.94□□□□□ -0.34
RPP40-201ENST00000319533 CYP4B1P13584 511 aa12.94□□□□□ -0.34
RPP40-201ENST00000319533 DRD2P14416 443 aa12.94□□□□□ -0.34
RPP40-201ENST00000319533 KRT15P19012 456 aa12.94□□□□□ -0.34
RPP40-201ENST00000319533 CD53P19397 219 aa12.94□□□□□ -0.34
RPP40-201ENST00000319533 TAC1P20366 129 aa12.94□□□□□ -0.34
RPP40-201ENST00000319533 NT5EP21589 574 aa12.94□□□□□ -0.34
RPP40-201ENST00000319533 CCNG1P51959 295 aa12.94□□□□□ -0.34
RPP40-201ENST00000319533 FOXF2Q12947 444 aa12.94□□□□□ -0.34
RPP40-201ENST00000319533 TOMM20Q15388 145 aa12.94□□□□□ -0.34
RPP40-201ENST00000319533 BEND6Q5SZJ8 279 aaPredicted RBP12.94□□□□□ -0.34
RPP40-201ENST00000319533 FRG2Q64ET8 278 aa12.94□□□□□ -0.34
RPP40-201ENST00000319533 SLC48A1Q6P1K1 146 aa12.94□□□□□ -0.34
RPP40-201ENST00000319533 ANGPTL8Q6UXH0 198 aa12.94□□□□□ -0.34
RPP40-201ENST00000319533 PAGE2Q7Z2X7 111 aa12.94□□□□□ -0.34
RPP40-201ENST00000319533 YRDCQ86U90 279 aaKnown RBP12.94□□□□□ -0.34
RPP40-201ENST00000319533 VWA5B2Q8N398 1253 aa12.94□□□□□ -0.34
RPP40-201ENST00000319533 METTL4Q8N3J2 472 aa12.94□□□□□ -0.34
RPP40-201ENST00000319533 OR52B6Q8NGF0 335 aa12.94□□□□□ -0.34
RPP40-201ENST00000319533 ACMSDQ8TDX5 336 aa12.94□□□□□ -0.34
RPP40-201ENST00000319533 SMPDL3BQ92485 455 aa12.94□□□□□ -0.34
RPP40-201ENST00000319533 WNT2BQ93097 391 aa12.94□□□□□ -0.34
RPP40-201ENST00000319533 CTHRC1Q96CG8 243 aa12.94□□□□□ -0.34
RPP40-201ENST00000319533 C18orf12Q96KH6 178 aa12.94□□□□□ -0.34
RPP40-201ENST00000319533 CDK15Q96Q40 435 aa12.94□□□□□ -0.34
RPP40-201ENST00000319533 FRG2BQ96QU4 278 aa12.94□□□□□ -0.34
RPP40-201ENST00000319533 NODALQ96S42 347 aa12.94□□□□□ -0.34
RPP40-201ENST00000319533 TM9SF2Q99805 663 aa12.94□□□□□ -0.34
RPP40-201ENST00000319533 TUBA1CQ9BQE3 449 aa12.94□□□□□ -0.34
RPP40-201ENST00000319533 OSBPL11Q9BXB4 747 aa12.94□□□□□ -0.34
RPP40-201ENST00000319533 NOL11Q9H8H0 719 aaKnown RBP12.94□□□□□ -0.34
RPP40-201ENST00000319533 METTL7AQ9H8H3 244 aa12.94□□□□□ -0.34
RPP40-201ENST00000319533 PPCSQ9HAB8 311 aa12.94□□□□□ -0.34
RPP40-201ENST00000319533 BEX4Q9NWD9 120 aaPredicted RBP12.94□□□□□ -0.34
RPP40-201ENST00000319533 MAT2BQ9NZL9 334 aa12.94□□□□□ -0.34
RPP40-201ENST00000319533 TBK1Q9UHD2 729 aa12.94□□□□□ -0.34
RPP40-201ENST00000319533 EXO1Q9UQ84 846 aaKnown RBP12.94□□□□□ -0.34
RPP40-201ENST00000319533 PCDHA9Q9Y5H5 950 aa12.94□□□□□ -0.34
RPP40-201ENST00000319533 C1orf226A1L170 272 aa12.93□□□□□ -0.34
RPP40-201ENST00000319533 TO15178 435 aa12.93□□□□□ -0.34
RPP40-201ENST00000319533 ERN1O75460 977 aaKnown RBP12.93□□□□□ -0.34
RPP40-201ENST00000319533 CBR3O75828 277 aa12.93□□□□□ -0.34
RPP40-201ENST00000319533 TUBBP07437 444 aa12.93□□□□□ -0.34
RPP40-201ENST00000319533 DRD5P21918 477 aa12.93□□□□□ -0.34
RPP40-201ENST00000319533 PCYT1AP49585 367 aa12.93□□□□□ -0.34
RPP40-201ENST00000319533 GFRA1P56159 465 aa12.93□□□□□ -0.34
RPP40-201ENST00000319533 DCAF7P61962 342 aa12.93□□□□□ -0.34
RPP40-201ENST00000319533 TRAF3Q13114 568 aa12.93□□□□□ -0.34
RPP40-201ENST00000319533 GGTA1PQ4G0N0 100 aa12.93□□□□□ -0.34
RPP40-201ENST00000319533 C6orf163Q5TEZ5 329 aa12.93□□□□□ -0.34
RPP40-201ENST00000319533 FBXW10Q5XX13 1052 aa12.93□□□□□ -0.34
RPP40-201ENST00000319533 DESI1Q6ICB0 168 aa12.93□□□□□ -0.34
RPP40-201ENST00000319533 FAM111BQ6SJ93 734 aa12.93□□□□□ -0.34
RPP40-201ENST00000319533 WDSUB1Q8N9V3 476 aa12.93□□□□□ -0.34
RPP40-201ENST00000319533 CAVIN3Q969G5 261 aa12.93□□□□□ -0.34
RPP40-201ENST00000319533 OMA1Q96E52 524 aa12.93□□□□□ -0.34
RPP40-201ENST00000319533 LCORQ96JN0 433 aaPredicted RBP12.93□□□□□ -0.34
RPP40-201ENST00000319533 YIPF4Q9BSR8 244 aa12.93□□□□□ -0.34
RPP40-201ENST00000319533 G6PC3Q9BUM1 346 aa12.93□□□□□ -0.34
RPP40-201ENST00000319533 RBM24Q9BX46 236 aaKnown RBP12.93□□□□□ -0.34
RPP40-201ENST00000319533 MRPL1Q9BYD6 325 aaKnown RBP12.93□□□□□ -0.34
RPP40-201ENST00000319533 ZBTB26Q9HCK0 441 aa12.93□□□□□ -0.34
RPP40-201ENST00000319533 NEUROD4Q9HD90 331 aa12.93□□□□□ -0.34
RPP40-201ENST00000319533 ZNF446Q9NWS9 450 aa12.93□□□□□ -0.34
RPP40-201ENST00000319533 AHSPQ9NZD4 102 aa12.93□□□□□ -0.34
RPP40-201ENST00000319533 PCTPQ9UKL6 214 aa12.93□□□□□ -0.34
RPP40-201ENST00000319533 GOLGA6L10A6NI86 522 aa12.92□□□□□ -0.34
RPP40-201ENST00000319533 GOLGA8RI6L899 631 aa12.92□□□□□ -0.34
RPP40-201ENST00000319533 UGT2B11O75310 529 aa12.92□□□□□ -0.34
RPP40-201ENST00000319533 GUCY1B2O75343 617 aa12.92□□□□□ -0.34
RPP40-201ENST00000319533 CBX7O95931 251 aa12.92□□□□□ -0.34
RPP40-201ENST00000319533 OTCP00480 354 aa12.92□□□□□ -0.34
RPP40-201ENST00000319533 GSTA1P08263 222 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms