RNA–Protein interactions for RNA: ENST00000317147.9

CNOT1-201, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNOT1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-201ENST00000317147 NKX3-2P78367 333 aa4.3□□□□□ -1.72
CNOT1-201ENST00000317147 CACNB2Q08289 660 aaPredicted RBP4.3□□□□□ -1.72
CNOT1-201ENST00000317147 NOL9Q5SY16 702 aaKnown RBP4.3□□□□□ -1.72
CNOT1-201ENST00000317147 NRROSQ86YC3 692 aa4.3□□□□□ -1.72
CNOT1-201ENST00000317147 TRIM48Q8IWZ4 208 aa4.3□□□□□ -1.72
CNOT1-201ENST00000317147 UMODL1-AS1Q8N2C9 162 aa4.3□□□□□ -1.72
CNOT1-201ENST00000317147 PELI3Q8N2H9 469 aa4.3□□□□□ -1.72
CNOT1-201ENST00000317147 OR6S1Q8NH40 331 aa4.3□□□□□ -1.72
CNOT1-201ENST00000317147 OR52N1Q8NH53 320 aa4.3□□□□□ -1.72
CNOT1-201ENST00000317147 LILRB1Q8NHL6 650 aaPredicted RBP4.3□□□□□ -1.72
CNOT1-201ENST00000317147 TRAPPC12Q8WVT3 735 aa4.3□□□□□ -1.72
CNOT1-201ENST00000317147 CRYGNQ8WXF5 182 aa4.3□□□□□ -1.72
CNOT1-201ENST00000317147 RGMAQ96B86 450 aa4.3□□□□□ -1.72
CNOT1-201ENST00000317147 RAB3CQ96E17 227 aa4.3□□□□□ -1.72
CNOT1-201ENST00000317147 CNN2Q99439 309 aaKnown RBP4.3□□□□□ -1.72
CNOT1-201ENST00000317147 GPR21Q99679 349 aa4.3□□□□□ -1.72
CNOT1-201ENST00000317147 MFFQ9GZY8 342 aa4.3□□□□□ -1.72
CNOT1-201ENST00000317147 CDT1Q9H211 546 aa4.3□□□□□ -1.72
CNOT1-201ENST00000317147 DPEP2Q9H4A9 486 aa4.3□□□□□ -1.72
CNOT1-201ENST00000317147 SOX17Q9H6I2 414 aaPredicted RBP4.3□□□□□ -1.72
CNOT1-201ENST00000317147 PCDHB7Q9Y5E2 793 aa4.3□□□□□ -1.72
CNOT1-201ENST00000317147 DNAJC15Q9Y5T4 150 aa4.3□□□□□ -1.72
CNOT1-201ENST00000317147 GPR45Q9Y5Y3 372 aa4.3□□□□□ -1.72
CNOT1-201ENST00000317147 NAV2Q8IVL1 2488 aa4.3□□□□□ -1.72
CNOT1-201ENST00000317147 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.3□□□□□ -1.72
CNOT1-201ENST00000317147 INSIG1O15503 277 aa4.3□□□□□ -1.72
CNOT1-201ENST00000317147 SIGLEC6O43699 453 aa4.3□□□□□ -1.72
CNOT1-201ENST00000317147 LATS1O95835 1130 aa4.3□□□□□ -1.72
CNOT1-201ENST00000317147 CAPNS1P04632 268 aa4.3□□□□□ -1.72
CNOT1-201ENST00000317147 NCK1P16333 377 aa4.3□□□□□ -1.72
CNOT1-201ENST00000317147 UGT2B7P16662 529 aa4.3□□□□□ -1.72
CNOT1-201ENST00000317147 MC4RP32245 332 aa4.3□□□□□ -1.72
CNOT1-201ENST00000317147 CAPSQ13938 189 aa4.3□□□□□ -1.72
CNOT1-201ENST00000317147 GRB14Q14449 540 aa4.3□□□□□ -1.72
CNOT1-201ENST00000317147 C14orf28Q4W4Y0 310 aa4.3□□□□□ -1.72
CNOT1-201ENST00000317147 BRAT1Q6PJG6 821 aa4.3□□□□□ -1.72
CNOT1-201ENST00000317147 TEX261Q6UWH6 196 aa4.3□□□□□ -1.72
CNOT1-201ENST00000317147 ZNF584Q8IVC4 421 aa4.3□□□□□ -1.72
CNOT1-201ENST00000317147 SLC7A5P1Q8MH63 180 aa4.3□□□□□ -1.72
CNOT1-201ENST00000317147 PXT1Q8NFP0 134 aa4.3□□□□□ -1.72
CNOT1-201ENST00000317147 APOLD1Q96LR9 279 aa4.3□□□□□ -1.72
CNOT1-201ENST00000317147 OR5B12Q96R08 314 aa4.3□□□□□ -1.72
CNOT1-201ENST00000317147 DPCDQ9BVM2 203 aaPredicted RBP4.3□□□□□ -1.72
CNOT1-201ENST00000317147 ZDHHC4Q9NPG8 344 aa4.3□□□□□ -1.72
CNOT1-201ENST00000317147 SLC35C2Q9NQQ7 365 aa4.3□□□□□ -1.72
CNOT1-201ENST00000317147 NDRG4Q9ULP0 352 aaKnown RBP4.3□□□□□ -1.72
CNOT1-201ENST00000317147 U3KQ87 197 aa4.3□□□□□ -1.72
CNOT1-201ENST00000317147 NHSL1Q5SYE7 1610 aa4.3□□□□□ -1.72
CNOT1-201ENST00000317147 GAPDHSO14556 408 aaPredicted RBP4.3□□□□□ -1.72
CNOT1-201ENST00000317147 TSPAN3O60637 253 aa4.3□□□□□ -1.72
CNOT1-201ENST00000317147 ZNF623O75123 536 aa4.3□□□□□ -1.72
CNOT1-201ENST00000317147 GBAP04062 536 aa4.3□□□□□ -1.72
CNOT1-201ENST00000317147 MMP10P09238 476 aa4.3□□□□□ -1.72
CNOT1-201ENST00000317147 AKAIN1P0CW23 69 aa4.3□□□□□ -1.72
CNOT1-201ENST00000317147 ALPPL2P10696 532 aa4.3□□□□□ -1.72
CNOT1-201ENST00000317147 ACP2P11117 423 aa4.3□□□□□ -1.72
CNOT1-201ENST00000317147 UBL4AP11441 157 aa4.3□□□□□ -1.72
CNOT1-201ENST00000317147 PRKCAP17252 672 aa4.3□□□□□ -1.72
CNOT1-201ENST00000317147 PTPRAP18433 802 aa4.3□□□□□ -1.72
CNOT1-201ENST00000317147 HTR1BP28222 390 aa4.3□□□□□ -1.72
CNOT1-201ENST00000317147 GRK5P34947 590 aa4.3□□□□□ -1.72
CNOT1-201ENST00000317147 MPIP34949 423 aa4.3□□□□□ -1.72
CNOT1-201ENST00000317147 PSEN2P49810 448 aa4.3□□□□□ -1.72
CNOT1-201ENST00000317147 DLK1P80370 383 aa4.3□□□□□ -1.72
CNOT1-201ENST00000317147 CARD16Q5EG05 197 aa4.3□□□□□ -1.72
CNOT1-201ENST00000317147 PPP1R26Q5T8A7 1209 aaPredicted RBP4.3□□□□□ -1.72
CNOT1-201ENST00000317147 PRPF38BQ5VTL8 546 aaKnown RBP4.3□□□□□ -1.72
CNOT1-201ENST00000317147 ABHD13Q7L211 337 aa4.3□□□□□ -1.72
CNOT1-201ENST00000317147 CCDC190Q86UF4 302 aa4.3□□□□□ -1.72
CNOT1-201ENST00000317147 ANKLE1Q8NAG6 615 aa4.3□□□□□ -1.72
CNOT1-201ENST00000317147 CNIH3Q8TBE1 160 aa4.3□□□□□ -1.72
CNOT1-201ENST00000317147 BRIX1Q8TDN6 353 aaKnown RBP4.3□□□□□ -1.72
CNOT1-201ENST00000317147 STK35Q8TDR2 534 aa4.3□□□□□ -1.72
CNOT1-201ENST00000317147 RNF128Q8TEB7 428 aa4.3□□□□□ -1.72
CNOT1-201ENST00000317147 NTMT1Q9BV86 223 aa4.3□□□□□ -1.72
CNOT1-201ENST00000317147 WDR6Q9NNW5 1121 aaKnown RBP4.3□□□□□ -1.72
CNOT1-201ENST00000317147 ACOXLQ9NUZ1 547 aa4.3□□□□□ -1.72
CNOT1-201ENST00000317147 PPIEQ9UNP9 301 aaKnown RBP4.3□□□□□ -1.72
CNOT1-201ENST00000317147 DIMT1Q9UNQ2 313 aaKnown RBP4.3□□□□□ -1.72
CNOT1-201ENST00000317147 PCDHAC2Q9Y5I4 1007 aa4.3□□□□□ -1.72
CNOT1-201ENST00000317147 TMEM218A2RU14 115 aa4.3□□□□□ -1.72
CNOT1-201ENST00000317147 ANKRD61A6NGH8 418 aa4.3□□□□□ -1.72
CNOT1-201ENST00000317147 XYLBO75191 536 aa4.3□□□□□ -1.72
CNOT1-201ENST00000317147 MGMTP16455 207 aa4.3□□□□□ -1.72
CNOT1-201ENST00000317147 ENGP17813 658 aa4.3□□□□□ -1.72
CNOT1-201ENST00000317147 EPORP19235 508 aa4.3□□□□□ -1.72
CNOT1-201ENST00000317147 ELK1P19419 428 aa4.3□□□□□ -1.72
CNOT1-201ENST00000317147 ILKQ13418 452 aa4.3□□□□□ -1.72
CNOT1-201ENST00000317147 PUM1Q14671 1186 aaKnown RBP eCLIP4.3□□□□□ -1.72
CNOT1-201ENST00000317147 SSX6Q7RTT6 188 aa4.3□□□□□ -1.72
CNOT1-201ENST00000317147 B3GNT8Q7Z7M8 397 aa4.3□□□□□ -1.72
CNOT1-201ENST00000317147 KCNRGQ8N5I3 272 aa4.3□□□□□ -1.72
CNOT1-201ENST00000317147 ZNF454Q8N9F8 522 aa4.3□□□□□ -1.72
CNOT1-201ENST00000317147 ST8SIA4Q92187 359 aa4.3□□□□□ -1.72
CNOT1-201ENST00000317147 RRNAD1Q96FB5 475 aaKnown RBP4.3□□□□□ -1.72
CNOT1-201ENST00000317147 PIWIL1Q96J94 861 aaKnown RBP4.3□□□□□ -1.72
CNOT1-201ENST00000317147 TMEM43Q9BTV4 400 aa4.3□□□□□ -1.72
CNOT1-201ENST00000317147 MCCC2Q9HCC0 563 aa4.3□□□□□ -1.72
CNOT1-201ENST00000317147 DUSP22Q9NRW4 184 aa4.3□□□□□ -1.72
CNOT1-201ENST00000317147 C14orf119Q9NWQ9 140 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms