RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 KCNE3Q9Y6H6 103 aa11.12□□□□□ -0.63
TRIM40-205ENST00000307859 A0A1B0GTQ1 180 aa11.11□□□□□ -0.63
TRIM40-205ENST00000307859 H3BMH7 237 aa11.11□□□□□ -0.63
TRIM40-205ENST00000307859 J3KTA2 159 aa11.11□□□□□ -0.63
TRIM40-205ENST00000307859 B4GAT1O43505 415 aa11.11□□□□□ -0.63
TRIM40-205ENST00000307859 MITFO75030 526 aaPredicted RBP11.11□□□□□ -0.63
TRIM40-205ENST00000307859 BMP10O95393 424 aa11.11□□□□□ -0.63
TRIM40-205ENST00000307859 LINGO3P0C6S8 592 aa11.11□□□□□ -0.63
TRIM40-205ENST00000307859 CNR2P34972 360 aa11.11□□□□□ -0.63
TRIM40-205ENST00000307859 PPM1FP49593 454 aaPredicted RBP11.11□□□□□ -0.63
TRIM40-205ENST00000307859 CDH12P55289 794 aa11.11□□□□□ -0.63
TRIM40-205ENST00000307859 IGLV3-21P80748 117 aaPredicted RBP11.11□□□□□ -0.63
TRIM40-205ENST00000307859 MGAT2Q10469 447 aa11.11□□□□□ -0.63
TRIM40-205ENST00000307859 IL18R1Q13478 541 aa11.11□□□□□ -0.63
TRIM40-205ENST00000307859 FAM214AQ32MH5 1076 aa11.11□□□□□ -0.63
TRIM40-205ENST00000307859 TTC33Q6PID6 262 aaPredicted RBP11.11□□□□□ -0.63
TRIM40-205ENST00000307859 PRSS42Q7Z5A4 293 aa11.11□□□□□ -0.63
TRIM40-205ENST00000307859 PLXDC1Q8IUK5 500 aa11.11□□□□□ -0.63
TRIM40-205ENST00000307859 GIPC3Q8TF64 312 aa11.11□□□□□ -0.63
TRIM40-205ENST00000307859 CTHRC1Q96CG8 243 aa11.11□□□□□ -0.63
TRIM40-205ENST00000307859 SLC35A4Q96G79 324 aa11.11□□□□□ -0.63
TRIM40-205ENST00000307859 DHRS1Q96LJ7 313 aa11.11□□□□□ -0.63
TRIM40-205ENST00000307859 YTHDF1Q9BYJ9 559 aaKnown RBP11.11□□□□□ -0.63
TRIM40-205ENST00000307859 SLC38A1Q9H2H9 487 aa11.11□□□□□ -0.63
TRIM40-205ENST00000307859 ACER3Q9NUN7 267 aa11.11□□□□□ -0.63
TRIM40-205ENST00000307859 MAT2BQ9NZL9 334 aa11.11□□□□□ -0.63
TRIM40-205ENST00000307859 FAM32AQ9Y421 112 aaKnown RBP11.11□□□□□ -0.63
TRIM40-205ENST00000307859 LOC100130705A0A1B0GUX0 176 aa11.1□□□□□ -0.63
TRIM40-205ENST00000307859 ARRDC5A6NEK1 342 aa11.1□□□□□ -0.63
TRIM40-205ENST00000307859 TRIM64CA6NLI5 447 aa11.1□□□□□ -0.63
TRIM40-205ENST00000307859 E9PQ18 207 aa11.1□□□□□ -0.63
TRIM40-205ENST00000307859 H0YIG0 161 aa11.1□□□□□ -0.63
TRIM40-205ENST00000307859 CASC3O15234 703 aaKnown RBP11.1□□□□□ -0.63
TRIM40-205ENST00000307859 HRO43593 1189 aa11.1□□□□□ -0.63
TRIM40-205ENST00000307859 CLPTM1O96005 669 aa11.1□□□□□ -0.63
TRIM40-205ENST00000307859 TFAP2AP05549 437 aa11.1□□□□□ -0.63
TRIM40-205ENST00000307859 SLC35E2P0CK97 266 aa11.1□□□□□ -0.63
TRIM40-205ENST00000307859 ACP2P11117 423 aa11.1□□□□□ -0.63
TRIM40-205ENST00000307859 CDH2P19022 906 aaPredicted RBP11.1□□□□□ -0.63
TRIM40-205ENST00000307859 NT5EP21589 574 aa11.1□□□□□ -0.63
TRIM40-205ENST00000307859 CD1CP29017 333 aa11.1□□□□□ -0.63
TRIM40-205ENST00000307859 YAP1P46937 504 aaKnown RBP11.1□□□□□ -0.63
TRIM40-205ENST00000307859 RPS6KA3P51812 740 aa11.1□□□□□ -0.63
TRIM40-205ENST00000307859 GRM7Q14831 915 aa11.1□□□□□ -0.63
TRIM40-205ENST00000307859 LPAL2Q16609 132 aa11.1□□□□□ -0.63
TRIM40-205ENST00000307859 GPAT3Q53EU6 434 aa11.1□□□□□ -0.63
TRIM40-205ENST00000307859 ATAD3BQ5T9A4 648 aa11.1□□□□□ -0.63
TRIM40-205ENST00000307859 ZNF691Q5VV52 312 aa11.1□□□□□ -0.63
TRIM40-205ENST00000307859 ZCCHC12Q6PEW1 402 aa11.1□□□□□ -0.63
TRIM40-205ENST00000307859 WDR74Q6RFH5 385 aaPredicted RBP11.1□□□□□ -0.63
TRIM40-205ENST00000307859 OLIG3Q7RTU3 272 aa11.1□□□□□ -0.63
TRIM40-205ENST00000307859 THAP5Q7Z6K1 395 aa11.1□□□□□ -0.63
TRIM40-205ENST00000307859 ZNF595Q8IYB9 648 aa11.1□□□□□ -0.63
TRIM40-205ENST00000307859 C8orf59Q8N0T1 100 aaPredicted RBP11.1□□□□□ -0.63
TRIM40-205ENST00000307859 ZNF786Q8N393 782 aa11.1□□□□□ -0.63
TRIM40-205ENST00000307859 D2HGDHQ8N465 521 aa11.1□□□□□ -0.63
TRIM40-205ENST00000307859 SLC16A11Q8NCK7 471 aa11.1□□□□□ -0.63
TRIM40-205ENST00000307859 SIMC1Q8NDZ2 872 aa11.1□□□□□ -0.63
TRIM40-205ENST00000307859 TSPAN14Q8NG11 270 aa11.1□□□□□ -0.63
TRIM40-205ENST00000307859 OR10G2Q8NGC3 310 aa11.1□□□□□ -0.63
TRIM40-205ENST00000307859 OR4D11Q8NGI4 311 aa11.1□□□□□ -0.63
TRIM40-205ENST00000307859 ADAMTS15Q8TE58 950 aa11.1□□□□□ -0.63
TRIM40-205ENST00000307859 HOXB13Q92826 284 aaPredicted RBP11.1□□□□□ -0.63
TRIM40-205ENST00000307859 DUSP23Q9BVJ7 150 aa11.1□□□□□ -0.63
TRIM40-205ENST00000307859 PINK1Q9BXM7 581 aa11.1□□□□□ -0.63
TRIM40-205ENST00000307859 FAM192AQ9GZU8 254 aa11.1□□□□□ -0.63
TRIM40-205ENST00000307859 RXFP3Q9NSD7 469 aa11.1□□□□□ -0.63
TRIM40-205ENST00000307859 HCN3Q9P1Z3 774 aa11.1□□□□□ -0.63
TRIM40-205ENST00000307859 KIF17Q9P2E2 1029 aa11.1□□□□□ -0.63
TRIM40-205ENST00000307859 KLHL3Q9UH77 587 aa11.1□□□□□ -0.63
TRIM40-205ENST00000307859 ACAD8Q9UKU7 415 aa11.1□□□□□ -0.63
TRIM40-205ENST00000307859 CLCA2Q9UQC9 943 aa11.1□□□□□ -0.63
TRIM40-205ENST00000307859 CEP295Q9C0D2 2601 aa11.1□□□□□ -0.63
TRIM40-205ENST00000307859 SEC16AO15027 2179 aa11.1□□□□□ -0.63
TRIM40-205ENST00000307859 SYT5O00445 386 aa11.09□□□□□ -0.63
TRIM40-205ENST00000307859 FFAR1O14842 300 aa11.09□□□□□ -0.63
TRIM40-205ENST00000307859 UGT2B11O75310 529 aa11.09□□□□□ -0.63
TRIM40-205ENST00000307859 SEMA7AO75326 666 aa11.09□□□□□ -0.63
TRIM40-205ENST00000307859 GADD45GO95257 159 aa11.09□□□□□ -0.63
TRIM40-205ENST00000307859 ZIC2O95409 532 aaPredicted RBP11.09□□□□□ -0.63
TRIM40-205ENST00000307859 EPPINO95925 133 aa11.09□□□□□ -0.63
TRIM40-205ENST00000307859 MSL3P1P0C860 447 aa11.09□□□□□ -0.63
TRIM40-205ENST00000307859 PNLIPP16233 465 aa11.09□□□□□ -0.63
TRIM40-205ENST00000307859 POLR2IP36954 125 aaKnown RBP11.09□□□□□ -0.63
TRIM40-205ENST00000307859 MAP3K8P41279 467 aa11.09□□□□□ -0.63
TRIM40-205ENST00000307859 RPL5P46777 297 aaKnown RBP11.09□□□□□ -0.63
TRIM40-205ENST00000307859 GCGRP47871 477 aa11.09□□□□□ -0.63
TRIM40-205ENST00000307859 AVPR1BP47901 424 aa11.09□□□□□ -0.63
TRIM40-205ENST00000307859 TUBA4AP68366 448 aa11.09□□□□□ -0.63
TRIM40-205ENST00000307859 HSD11B2P80365 405 aa11.09□□□□□ -0.63
TRIM40-205ENST00000307859 KEAP1Q14145 624 aa11.09□□□□□ -0.63
TRIM40-205ENST00000307859 DUSP5Q16690 384 aa11.09□□□□□ -0.63
TRIM40-205ENST00000307859 MICAQ29983 383 aa11.09□□□□□ -0.63
TRIM40-205ENST00000307859 EXOC3L2Q2M3D2 409 aa11.09□□□□□ -0.63
TRIM40-205ENST00000307859 TRMT12Q53H54 448 aaKnown RBP11.09□□□□□ -0.63
TRIM40-205ENST00000307859 FOXB2Q5VYV0 432 aa11.09□□□□□ -0.63
TRIM40-205ENST00000307859 TCTN3Q6NUS6 607 aa11.09□□□□□ -0.63
TRIM40-205ENST00000307859 C16orf62Q7Z3J2 963 aa11.09□□□□□ -0.63
TRIM40-205ENST00000307859 GALNT5Q7Z7M9 940 aa11.09□□□□□ -0.63
TRIM40-205ENST00000307859 COMTD1Q86VU5 262 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms