RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 ARHGAP11BQ3KRB8 267 aa12.8□□□□□ -0.36
TRIM56-201ENST00000306085 C4orf17Q53FE4 359 aa12.8□□□□□ -0.36
TRIM56-201ENST00000306085 TRMT10BQ6PF06 316 aaKnown RBP12.8□□□□□ -0.36
TRIM56-201ENST00000306085 SUSD1Q6UWL2 747 aa12.8□□□□□ -0.36
TRIM56-201ENST00000306085 DOCK10Q96BY6 2186 aa12.8□□□□□ -0.36
TRIM56-201ENST00000306085 SGSHP51688 502 aa12.8□□□□□ -0.36
TRIM56-201ENST00000306085 KDM8Q8N371 416 aa12.8□□□□□ -0.36
TRIM56-201ENST00000306085 SLC5A11Q8WWX8 675 aa12.8□□□□□ -0.36
TRIM56-201ENST00000306085 FAM46AQ96IP4 442 aaKnown RBP12.8□□□□□ -0.36
TRIM56-201ENST00000306085 DNAJB11Q9UBS4 358 aa12.8□□□□□ -0.36
TRIM56-201ENST00000306085 A6NCN8 305 aa12.8□□□□□ -0.36
TRIM56-201ENST00000306085 ATP1B2P14415 290 aaPredicted RBP12.8□□□□□ -0.36
TRIM56-201ENST00000306085 TRIM61Q5EBN2 209 aa12.8□□□□□ -0.36
TRIM56-201ENST00000306085 GOLGA7Q7Z5G4 137 aa12.8□□□□□ -0.36
TRIM56-201ENST00000306085 OPA3Q9H6K4 179 aa12.8□□□□□ -0.36
TRIM56-201ENST00000306085 PLAC9Q5JTB6 97 aa12.8□□□□□ -0.36
TRIM56-201ENST00000306085 LANCL3Q6ZV70 420 aa12.8□□□□□ -0.36
TRIM56-201ENST00000306085 OR9I1Q8NGQ6 314 aa12.8□□□□□ -0.36
TRIM56-201ENST00000306085 UHRF2Q96PU4 802 aa12.8□□□□□ -0.36
TRIM56-201ENST00000306085 ATG2BQ96BY7 2078 aa12.79□□□□□ -0.36
TRIM56-201ENST00000306085 SCN1AP35498 2009 aa12.79□□□□□ -0.36
TRIM56-201ENST00000306085 RFPL3O75679 317 aa12.79□□□□□ -0.36
TRIM56-201ENST00000306085 ZBTB20Q9HC78 741 aaPredicted RBP12.79□□□□□ -0.36
TRIM56-201ENST00000306085 ZDHHC3Q9NYG2 299 aa12.79□□□□□ -0.36
TRIM56-201ENST00000306085 GJD2Q9UKL4 321 aa12.79□□□□□ -0.36
TRIM56-201ENST00000306085 ZC3H13Q5T200 1668 aaKnown RBP12.79□□□□□ -0.36
TRIM56-201ENST00000306085 NPPAP01160 153 aa12.79□□□□□ -0.36
TRIM56-201ENST00000306085 FAM84AQ96KN4 292 aa12.79□□□□□ -0.36
TRIM56-201ENST00000306085 KCNA7Q96RP8 456 aa12.79□□□□□ -0.36
TRIM56-201ENST00000306085 ZNF860A6NHJ4 632 aa12.79□□□□□ -0.36
TRIM56-201ENST00000306085 GCGRP47871 477 aa12.79□□□□□ -0.36
TRIM56-201ENST00000306085 YBEYP58557 167 aaPredicted RBP12.79□□□□□ -0.36
TRIM56-201ENST00000306085 RPL26P61254 145 aaKnown RBP12.79□□□□□ -0.36
TRIM56-201ENST00000306085 TMEM71Q6P5X7 295 aa12.79□□□□□ -0.36
TRIM56-201ENST00000306085 GAB3Q8WWW8 586 aa12.79□□□□□ -0.36
TRIM56-201ENST00000306085 MAL2Q969L2 176 aa12.79□□□□□ -0.36
TRIM56-201ENST00000306085 RABL3Q5HYI8 236 aa12.79□□□□□ -0.36
TRIM56-201ENST00000306085 OR5AK2Q8NH90 309 aa12.79□□□□□ -0.36
TRIM56-201ENST00000306085 SPTSSAQ969W0 71 aa12.79□□□□□ -0.36
TRIM56-201ENST00000306085 GLIS2Q9BZE0 524 aaPredicted RBP12.79□□□□□ -0.36
TRIM56-201ENST00000306085 FAM120CQ9NX05 1096 aaKnown RBP12.79□□□□□ -0.36
TRIM56-201ENST00000306085 COPS3Q9UNS2 423 aa12.79□□□□□ -0.36
TRIM56-201ENST00000306085 DISP2A7MBM2 1401 aa12.79□□□□□ -0.36
TRIM56-201ENST00000306085 OR2T1O43869 369 aa12.79□□□□□ -0.36
TRIM56-201ENST00000306085 SYN1P17600 705 aa12.79□□□□□ -0.36
TRIM56-201ENST00000306085 SSTR4P31391 388 aa12.79□□□□□ -0.36
TRIM56-201ENST00000306085 RAB8AP61006 207 aa12.79□□□□□ -0.36
TRIM56-201ENST00000306085 IRF2BP2Q7Z5L9 587 aa12.79□□□□□ -0.36
TRIM56-201ENST00000306085 LRRC57Q8N9N7 239 aa12.79□□□□□ -0.36
TRIM56-201ENST00000306085 LRIG1Q96JA1 1093 aa12.79□□□□□ -0.36
TRIM56-201ENST00000306085 OR52B2Q96RD2 323 aa12.79□□□□□ -0.36
TRIM56-201ENST00000306085 RNF11Q9Y3C5 154 aa12.79□□□□□ -0.36
TRIM56-201ENST00000306085 TRAV18A0A075B6X5 111 aa12.79□□□□□ -0.36
TRIM56-201ENST00000306085 MANBAO00462 879 aa12.79□□□□□ -0.36
TRIM56-201ENST00000306085 IL13RA1P78552 427 aa12.79□□□□□ -0.36
TRIM56-201ENST00000306085 ZNF630Q2M218 657 aaPredicted RBP12.79□□□□□ -0.36
TRIM56-201ENST00000306085 SFT2D3Q587I9 215 aa12.79□□□□□ -0.36
TRIM56-201ENST00000306085 TICAM1Q8IUC6 712 aa12.79□□□□□ -0.36
TRIM56-201ENST00000306085 TRMT2BQ96GJ1 504 aaKnown RBP12.79□□□□□ -0.36
TRIM56-201ENST00000306085 SENP5Q96HI0 755 aaPredicted RBP12.79□□□□□ -0.36
TRIM56-201ENST00000306085 PURGQ9UJV8 347 aaKnown RBP12.79□□□□□ -0.36
TRIM56-201ENST00000306085 CBY1Q9Y3M2 126 aa12.79□□□□□ -0.36
TRIM56-201ENST00000306085 ARHGEF5Q12774 1597 aa12.79□□□□□ -0.36
TRIM56-201ENST00000306085 SYT7O43581 403 aa12.79□□□□□ -0.36
TRIM56-201ENST00000306085 ITGB2P05107 769 aa12.79□□□□□ -0.36
TRIM56-201ENST00000306085 DHRS4L1P0CG22 281 aa12.79□□□□□ -0.36
TRIM56-201ENST00000306085 LAG3P18627 525 aa12.79□□□□□ -0.36
TRIM56-201ENST00000306085 HOXD12P35452 270 aa12.79□□□□□ -0.36
TRIM56-201ENST00000306085 LCLAT1Q6UWP7 414 aa12.79□□□□□ -0.36
TRIM56-201ENST00000306085 TCTE3Q8IZS6 198 aa12.79□□□□□ -0.36
TRIM56-201ENST00000306085 OR52E2Q8NGJ4 325 aa12.79□□□□□ -0.36
TRIM56-201ENST00000306085 PLEKHO2Q8TD55 490 aa12.79□□□□□ -0.36
TRIM56-201ENST00000306085 FAAHO00519 579 aa12.79□□□□□ -0.36
TRIM56-201ENST00000306085 ZNF207O43670 478 aaKnown RBP12.79□□□□□ -0.36
TRIM56-201ENST00000306085 SERPINA5P05154 406 aa12.79□□□□□ -0.36
TRIM56-201ENST00000306085 EIF4EP06730 217 aaKnown RBP12.79□□□□□ -0.36
TRIM56-201ENST00000306085 SOX3P41225 446 aa12.79□□□□□ -0.36
TRIM56-201ENST00000306085 BEX5Q5H9J7 111 aa12.79□□□□□ -0.36
TRIM56-201ENST00000306085 LYSMD3Q7Z3D4 306 aa12.79□□□□□ -0.36
TRIM56-201ENST00000306085 BBS10Q8TAM1 723 aa12.79□□□□□ -0.36
TRIM56-201ENST00000306085 ZNF416Q9BWM5 594 aa12.79□□□□□ -0.36
TRIM56-201ENST00000306085 EIF2B3Q9NR50 452 aaKnown RBP12.79□□□□□ -0.36
TRIM56-201ENST00000306085 B3GNT3Q9Y2A9 372 aa12.79□□□□□ -0.36
TRIM56-201ENST00000306085 PROS1P07225 676 aa12.78□□□□□ -0.36
TRIM56-201ENST00000306085 OR10J4P0C629 311 aa12.78□□□□□ -0.36
TRIM56-201ENST00000306085 CPNE8Q86YQ8 564 aa12.78□□□□□ -0.36
TRIM56-201ENST00000306085 OR11A1Q9GZK7 315 aa12.78□□□□□ -0.36
TRIM56-201ENST00000306085 MMP28Q9H239 520 aa12.78□□□□□ -0.36
TRIM56-201ENST00000306085 A0A1W2PQL4 384 aaPredicted RBP12.78□□□□□ -0.36
TRIM56-201ENST00000306085 UQCRC2P22695 453 aa12.78□□□□□ -0.36
TRIM56-201ENST00000306085 LRRC55Q6ZSA7 311 aa12.78□□□□□ -0.36
TRIM56-201ENST00000306085 GKN2Q86XP6 184 aa12.78□□□□□ -0.36
TRIM56-201ENST00000306085 ARNTL2Q8WYA1 636 aa12.78□□□□□ -0.36
TRIM56-201ENST00000306085 NMNAT2Q9BZQ4 307 aa12.78□□□□□ -0.36
TRIM56-201ENST00000306085 MFFQ9GZY8 342 aa12.78□□□□□ -0.36
TRIM56-201ENST00000306085 PRKYO43930 277 aa12.78□□□□□ -0.36
TRIM56-201ENST00000306085 RASAL1O95294 804 aa12.78□□□□□ -0.36
TRIM56-201ENST00000306085 PCDHB10Q9UN67 800 aa12.78□□□□□ -0.36
TRIM56-201ENST00000306085 TMEM98Q9Y2Y6 226 aa12.78□□□□□ -0.36
TRIM56-201ENST00000306085 SEC14L5O43304 696 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms