RNA–Protein interactions for RNA: ENST00000302190.8

SDC2-201, Transcript of syndecan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-201ENST00000302190 RAB36O95755 333 aa13.29□□□□□ -0.28
SDC2-201ENST00000302190 GNSP15586 552 aa13.29□□□□□ -0.28
SDC2-201ENST00000302190 PRKACAP17612 351 aa13.29□□□□□ -0.28
SDC2-201ENST00000302190 GCGRP47871 477 aa13.29□□□□□ -0.28
SDC2-201ENST00000302190 MTNR1AP48039 350 aa13.29□□□□□ -0.28
SDC2-201ENST00000302190 ASTLQ6HA08 431 aaPredicted RBP13.29□□□□□ -0.28
SDC2-201ENST00000302190 HTR3DQ70Z44 454 aa13.29□□□□□ -0.28
SDC2-201ENST00000302190 TOR1AIP2Q8NFQ8 470 aa13.29□□□□□ -0.28
SDC2-201ENST00000302190 SNX33Q8WV41 574 aa13.29□□□□□ -0.28
SDC2-201ENST00000302190 RFKQ969G6 155 aa13.29□□□□□ -0.28
SDC2-201ENST00000302190 RANGRFQ9HD47 186 aaPredicted RBP13.29□□□□□ -0.28
SDC2-201ENST00000302190 MAN2B2Q9Y2E5 1009 aa13.29□□□□□ -0.28
SDC2-201ENST00000302190 FNDC1Q4ZHG4 1894 aaPredicted RBP13.29□□□□□ -0.28
SDC2-201ENST00000302190 CACNB4O00305 520 aaPredicted RBP13.28□□□□□ -0.28
SDC2-201ENST00000302190 MTRF1O75570 445 aaKnown RBP13.28□□□□□ -0.28
SDC2-201ENST00000302190 RPP14O95059 124 aaKnown RBP13.28□□□□□ -0.28
SDC2-201ENST00000302190 GYPBP06028 91 aa13.28□□□□□ -0.28
SDC2-201ENST00000302190 APEX1P27695 318 aaKnown RBP13.28□□□□□ -0.28
SDC2-201ENST00000302190 CLDN2P57739 230 aa13.28□□□□□ -0.28
SDC2-201ENST00000302190 ERVFC1P60507 584 aa13.28□□□□□ -0.28
SDC2-201ENST00000302190 RGS1Q08116 209 aa13.28□□□□□ -0.28
SDC2-201ENST00000302190 CXXC5Q7LFL8 322 aaKnown RBP13.28□□□□□ -0.28
SDC2-201ENST00000302190 TMEFF1Q8IYR6 380 aa13.28□□□□□ -0.28
SDC2-201ENST00000302190 A0A1W2PRG6 482 aa13.28□□□□□ -0.28
SDC2-201ENST00000302190 CLDN24A6NM45 220 aa13.28□□□□□ -0.28
SDC2-201ENST00000302190 PSMD9O00233 223 aa13.28□□□□□ -0.28
SDC2-201ENST00000302190 FURINP09958 794 aa13.28□□□□□ -0.28
SDC2-201ENST00000302190 IRS1P35568 1242 aa13.28□□□□□ -0.28
SDC2-201ENST00000302190 PGDP52209 483 aa13.28□□□□□ -0.28
SDC2-201ENST00000302190 ABATP80404 500 aa13.28□□□□□ -0.28
SDC2-201ENST00000302190 CHRNEQ04844 493 aa13.28□□□□□ -0.28
SDC2-201ENST00000302190 ZNF542PQ5EBM4 170 aa13.28□□□□□ -0.28
SDC2-201ENST00000302190 PLBD1Q6P4A8 553 aa13.28□□□□□ -0.28
SDC2-201ENST00000302190 ENPP7Q6UWV6 458 aa13.28□□□□□ -0.28
SDC2-201ENST00000302190 GDPD3Q7L5L3 318 aa13.28□□□□□ -0.28
SDC2-201ENST00000302190 OR8H3Q8N146 312 aa13.28□□□□□ -0.28
SDC2-201ENST00000302190 TMEM45AQ9NWC5 275 aa13.28□□□□□ -0.28
SDC2-201ENST00000302190 IKZF2Q9UKS7 526 aa13.28□□□□□ -0.28
SDC2-201ENST00000302190 C12orf71A8MTZ7 269 aa13.28□□□□□ -0.28
SDC2-201ENST00000302190 RGS13O14921 159 aa13.28□□□□□ -0.28
SDC2-201ENST00000302190 HYAL3O43820 417 aaPredicted RBP13.28□□□□□ -0.28
SDC2-201ENST00000302190 GRPRP30550 384 aa13.28□□□□□ -0.28
SDC2-201ENST00000302190 HOXA9P31269 272 aa13.28□□□□□ -0.28
SDC2-201ENST00000302190 MC3RP41968 323 aa13.28□□□□□ -0.28
SDC2-201ENST00000302190 GBX1Q14549 363 aa13.28□□□□□ -0.28
SDC2-201ENST00000302190 HYAL4Q2M3T9 481 aa13.28□□□□□ -0.28
SDC2-201ENST00000302190 ZNF761Q86XN6 746 aaPredicted RBP13.28□□□□□ -0.28
SDC2-201ENST00000302190 TXNDC15Q96J42 360 aa13.28□□□□□ -0.28
SDC2-201ENST00000302190 AKIP1Q9NQ31 210 aa13.28□□□□□ -0.28
SDC2-201ENST00000302190 CCL27Q9Y4X3 112 aa13.28□□□□□ -0.28
SDC2-201ENST00000302190 HCFC2Q9Y5Z7 792 aa13.28□□□□□ -0.28
SDC2-201ENST00000302190 MIA3Q5JRA6 1907 aa13.27□□□□□ -0.28
SDC2-201ENST00000302190 LOC102723532A0A0G2JNH3 316 aa13.27□□□□□ -0.28
SDC2-201ENST00000302190 MEIOCA2RUB1 952 aa13.27□□□□□ -0.28
SDC2-201ENST00000302190 NRG2O14511 850 aaPredicted RBP13.27□□□□□ -0.28
SDC2-201ENST00000302190 ORC5O43913 435 aa13.27□□□□□ -0.28
SDC2-201ENST00000302190 STX11O75558 287 aa13.27□□□□□ -0.28
SDC2-201ENST00000302190 NFATC1O95644 943 aa13.27□□□□□ -0.28
SDC2-201ENST00000302190 PTTG1O95997 202 aa13.27□□□□□ -0.28
SDC2-201ENST00000302190 DHFRP00374 187 aa13.27□□□□□ -0.28
SDC2-201ENST00000302190 GKN3PP0CG01 181 aa13.27□□□□□ -0.28
SDC2-201ENST00000302190 AHRP35869 848 aa13.27□□□□□ -0.28
SDC2-201ENST00000302190 NAA10P41227 235 aaPredicted RBP13.27□□□□□ -0.28
SDC2-201ENST00000302190 SLC6A12P48065 614 aa13.27□□□□□ -0.28
SDC2-201ENST00000302190 MAN2A2P49641 1150 aa13.27□□□□□ -0.28
SDC2-201ENST00000302190 BTBD16Q32M84 506 aa13.27□□□□□ -0.28
SDC2-201ENST00000302190 TMEM240Q5SV17 173 aa13.27□□□□□ -0.28
SDC2-201ENST00000302190 PRPF38BQ5VTL8 546 aaKnown RBP13.27□□□□□ -0.28
SDC2-201ENST00000302190 KLHL36Q8N4N3 616 aa13.27□□□□□ -0.28
SDC2-201ENST00000302190 LSMEM1Q8N8F7 131 aa13.27□□□□□ -0.28
SDC2-201ENST00000302190 OR4C6Q8NH72 309 aa13.27□□□□□ -0.28
SDC2-201ENST00000302190 HCAR2Q8TDS4 363 aa13.27□□□□□ -0.28
SDC2-201ENST00000302190 RERGQ96A58 199 aaPredicted RBP13.27□□□□□ -0.28
SDC2-201ENST00000302190 FYTTD1Q96QD9 318 aaKnown RBP13.27□□□□□ -0.28
SDC2-201ENST00000302190 SLIRPQ9GZT3 109 aaKnown RBP13.27□□□□□ -0.28
SDC2-201ENST00000302190 STUB1Q9UNE7 303 aa13.27□□□□□ -0.28
SDC2-201ENST00000302190 HS3ST2Q9Y278 367 aa13.27□□□□□ -0.28
SDC2-201ENST00000302190 H0YC42 278 aa13.27□□□□□ -0.29
SDC2-201ENST00000302190 H0YIV9 168 aa13.27□□□□□ -0.29
SDC2-201ENST00000302190 SMLR1H3BR10 107 aa13.27□□□□□ -0.29
SDC2-201ENST00000302190 FAAHO00519 579 aa13.27□□□□□ -0.29
SDC2-201ENST00000302190 EEF1E1O43324 174 aaKnown RBP13.27□□□□□ -0.29
SDC2-201ENST00000302190 GPX5O75715 221 aa13.27□□□□□ -0.29
SDC2-201ENST00000302190 YES1P07947 543 aa13.27□□□□□ -0.29
SDC2-201ENST00000302190 IL7P13232 177 aa13.27□□□□□ -0.29
SDC2-201ENST00000302190 CERS1P27544 350 aa13.27□□□□□ -0.29
SDC2-201ENST00000302190 PYCR1P32322 319 aa13.27□□□□□ -0.29
SDC2-201ENST00000302190 HTR2BP41595 481 aa13.27□□□□□ -0.29
SDC2-201ENST00000302190 ZNF155Q12901 538 aaPredicted RBP13.27□□□□□ -0.29
SDC2-201ENST00000302190 GPR19Q15760 415 aa13.27□□□□□ -0.29
SDC2-201ENST00000302190 C6orf132Q5T0Z8 1188 aa13.27□□□□□ -0.29
SDC2-201ENST00000302190 LAIR1Q6GTX8 287 aa13.27□□□□□ -0.29
SDC2-201ENST00000302190 KLHDC8BQ8IXV7 354 aa13.27□□□□□ -0.29
SDC2-201ENST00000302190 SLC7A13Q8TCU3 470 aa13.27□□□□□ -0.29
SDC2-201ENST00000302190 CDADC1Q9BWV3 514 aa13.27□□□□□ -0.29
SDC2-201ENST00000302190 SRMSQ9H3Y6 488 aa13.27□□□□□ -0.29
SDC2-201ENST00000302190 TMEM138Q9NPI0 162 aa13.27□□□□□ -0.29
SDC2-201ENST00000302190 ACER3Q9NUN7 267 aa13.27□□□□□ -0.29
SDC2-201ENST00000302190 SLC27A6Q9Y2P4 619 aa13.27□□□□□ -0.29
SDC2-201ENST00000302190 PCDHGA2Q9Y5H1 932 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms