RNA–Protein interactions for RNA: ENST00000297979.9

C9orf3-202, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best) BASIC

Gene C9orf3, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-202ENST00000297979 RSPO3Q9BXY4 272 aaPredicted RBP13.35□□□□□ -0.27
C9orf3-202ENST00000297979 CLK4Q9HAZ1 481 aaKnown RBP13.35□□□□□ -0.27
C9orf3-202ENST00000297979 HCN3Q9P1Z3 774 aa13.35□□□□□ -0.27
C9orf3-202ENST00000297979 SCN2AQ99250 2005 aa13.35□□□□□ -0.27
C9orf3-202ENST00000297979 DUXAA6NLW8 204 aa13.35□□□□□ -0.27
C9orf3-202ENST00000297979 J3KTA2 159 aa13.35□□□□□ -0.27
C9orf3-202ENST00000297979 MITFO75030 526 aaPredicted RBP13.35□□□□□ -0.27
C9orf3-202ENST00000297979 CLPTM1O96005 669 aa13.35□□□□□ -0.27
C9orf3-202ENST00000297979 NT5EP21589 574 aa13.35□□□□□ -0.27
C9orf3-202ENST00000297979 INAVAQ3KP66 663 aa13.35□□□□□ -0.27
C9orf3-202ENST00000297979 KCTD21Q4G0X4 260 aa13.35□□□□□ -0.27
C9orf3-202ENST00000297979 OLIG3Q7RTU3 272 aa13.35□□□□□ -0.27
C9orf3-202ENST00000297979 C16orf62Q7Z3J2 963 aa13.35□□□□□ -0.27
C9orf3-202ENST00000297979 GALNT5Q7Z7M9 940 aa13.35□□□□□ -0.27
C9orf3-202ENST00000297979 ZNF605Q86T29 641 aa13.35□□□□□ -0.27
C9orf3-202ENST00000297979 C8orf59Q8N0T1 100 aaPredicted RBP13.35□□□□□ -0.27
C9orf3-202ENST00000297979 PIK3C3Q8NEB9 887 aa13.35□□□□□ -0.27
C9orf3-202ENST00000297979 OR4C15Q8NGM1 316 aa13.35□□□□□ -0.27
C9orf3-202ENST00000297979 ADAMTS18Q8TE60 1221 aa13.35□□□□□ -0.27
C9orf3-202ENST00000297979 EDAQ92838 391 aa13.35□□□□□ -0.27
C9orf3-202ENST00000297979 GIN1Q9NXP7 522 aa13.35□□□□□ -0.27
C9orf3-202ENST00000297979 NLGN3Q9NZ94 848 aa13.35□□□□□ -0.27
C9orf3-202ENST00000297979 CALML5Q9NZT1 146 aa13.35□□□□□ -0.27
C9orf3-202ENST00000297979 C19orf53Q9UNZ5 99 aaPredicted RBP13.35□□□□□ -0.27
C9orf3-202ENST00000297979 PCDH15Q96QU1 1955 aa13.34□□□□□ -0.27
C9orf3-202ENST00000297979 A0A087WV62 115 aa13.34□□□□□ -0.27
C9orf3-202ENST00000297979 JRKO75564 520 aa13.34□□□□□ -0.27
C9orf3-202ENST00000297979 BMP10O95393 424 aa13.34□□□□□ -0.27
C9orf3-202ENST00000297979 AGR2O95994 175 aa13.34□□□□□ -0.27
C9orf3-202ENST00000297979 ITGAMP11215 1152 aa13.34□□□□□ -0.27
C9orf3-202ENST00000297979 CDH2P19022 906 aaPredicted RBP13.34□□□□□ -0.27
C9orf3-202ENST00000297979 SOX18P35713 384 aa13.34□□□□□ -0.27
C9orf3-202ENST00000297979 FAM214AQ32MH5 1076 aa13.34□□□□□ -0.27
C9orf3-202ENST00000297979 TRMT12Q53H54 448 aaKnown RBP13.34□□□□□ -0.27
C9orf3-202ENST00000297979 FHL5Q5TD97 284 aa13.34□□□□□ -0.27
C9orf3-202ENST00000297979 MAML2Q8IZL2 1156 aaPredicted RBP13.34□□□□□ -0.27
C9orf3-202ENST00000297979 Q8N9G6 341 aaPredicted RBP13.34□□□□□ -0.27
C9orf3-202ENST00000297979 TSPAN14Q8NG11 270 aa13.34□□□□□ -0.27
C9orf3-202ENST00000297979 OR6C4Q8NGE1 309 aa13.34□□□□□ -0.27
C9orf3-202ENST00000297979 ZNF675Q8TD23 568 aa13.34□□□□□ -0.27
C9orf3-202ENST00000297979 GIPC3Q8TF64 312 aa13.34□□□□□ -0.27
C9orf3-202ENST00000297979 TRNT1Q96Q11 434 aaKnown RBP13.34□□□□□ -0.27
C9orf3-202ENST00000297979 KRT84Q9NSB2 600 aa13.34□□□□□ -0.27
C9orf3-202ENST00000297979 MN1Q10571 1320 aaPredicted RBP13.34□□□□□ -0.27
C9orf3-202ENST00000297979 FITM1A5D6W6 292 aa13.34□□□□□ -0.27
C9orf3-202ENST00000297979 B4GAT1O43505 415 aa13.34□□□□□ -0.27
C9orf3-202ENST00000297979 PLOD3O60568 738 aa13.34□□□□□ -0.27
C9orf3-202ENST00000297979 NME6O75414 186 aaPredicted RBP13.34□□□□□ -0.27
C9orf3-202ENST00000297979 IFI6P09912 130 aa13.34□□□□□ -0.27
C9orf3-202ENST00000297979 MYF5P13349 255 aa13.34□□□□□ -0.27
C9orf3-202ENST00000297979 ATP6V1B1P15313 513 aa13.34□□□□□ -0.27
C9orf3-202ENST00000297979 TPD52P55327 224 aaPredicted RBP13.34□□□□□ -0.27
C9orf3-202ENST00000297979 IL1RL1Q01638 556 aa13.34□□□□□ -0.27
C9orf3-202ENST00000297979 CFHR1Q03591 330 aa13.34□□□□□ -0.27
C9orf3-202ENST00000297979 GRM7Q14831 915 aa13.34□□□□□ -0.27
C9orf3-202ENST00000297979 WDR53Q7Z5U6 358 aaPredicted RBP13.34□□□□□ -0.27
C9orf3-202ENST00000297979 JAZF1Q86VZ6 243 aa13.34□□□□□ -0.27
C9orf3-202ENST00000297979 C1orf210Q8IVY1 113 aa13.34□□□□□ -0.27
C9orf3-202ENST00000297979 SLC35A4Q96G79 324 aa13.34□□□□□ -0.27
C9orf3-202ENST00000297979 RBCK1Q9BYM8 510 aa13.34□□□□□ -0.27
C9orf3-202ENST00000297979 MRPS33Q9Y291 106 aaKnown RBP13.34□□□□□ -0.27
C9orf3-202ENST00000297979 CCDC88CQ9P219 2028 aa13.33□□□□□ -0.28
C9orf3-202ENST00000297979 A0A1B0GTQ1 180 aa13.33□□□□□ -0.28
C9orf3-202ENST00000297979 LOC100130705A0A1B0GUX0 176 aa13.33□□□□□ -0.28
C9orf3-202ENST00000297979 BLACEA4D250 179 aa13.33□□□□□ -0.28
C9orf3-202ENST00000297979 SLC16A6O15403 523 aa13.33□□□□□ -0.28
C9orf3-202ENST00000297979 CSF2RBP32927 897 aa13.33□□□□□ -0.28
C9orf3-202ENST00000297979 AVPR1BP47901 424 aa13.33□□□□□ -0.28
C9orf3-202ENST00000297979 ARL4DP49703 201 aa13.33□□□□□ -0.28
C9orf3-202ENST00000297979 HSD11B2P80365 405 aa13.33□□□□□ -0.28
C9orf3-202ENST00000297979 KCNAB1Q14722 419 aa13.33□□□□□ -0.28
C9orf3-202ENST00000297979 EXOC3L2Q2M3D2 409 aa13.33□□□□□ -0.28
C9orf3-202ENST00000297979 PRICKLE4Q2TBC4 344 aa13.33□□□□□ -0.28
C9orf3-202ENST00000297979 THAP5Q7Z6K1 395 aa13.33□□□□□ -0.28
C9orf3-202ENST00000297979 SLC16A11Q8NCK7 471 aa13.33□□□□□ -0.28
C9orf3-202ENST00000297979 SIMC1Q8NDZ2 872 aa13.33□□□□□ -0.28
C9orf3-202ENST00000297979 OR52J3Q8NH60 311 aa13.33□□□□□ -0.28
C9orf3-202ENST00000297979 PIGKQ92643 395 aa13.33□□□□□ -0.28
C9orf3-202ENST00000297979 PEX11GQ96HA9 241 aa13.33□□□□□ -0.28
C9orf3-202ENST00000297979 RBM14Q96PK6 669 aaKnown RBP13.33□□□□□ -0.28
C9orf3-202ENST00000297979 DUSP23Q9BVJ7 150 aa13.33□□□□□ -0.28
C9orf3-202ENST00000297979 SPRTNQ9H040 489 aaPredicted RBP13.33□□□□□ -0.28
C9orf3-202ENST00000297979 RIBC2Q9H4K1 309 aa13.33□□□□□ -0.28
C9orf3-202ENST00000297979 MAT2BQ9NZL9 334 aa13.33□□□□□ -0.28
C9orf3-202ENST00000297979 KCND3Q9UK17 655 aa13.33□□□□□ -0.28
C9orf3-202ENST00000297979 SDK1Q7Z5N4 2213 aa13.33□□□□□ -0.28
C9orf3-202ENST00000297979 GADD45GO95257 159 aa13.33□□□□□ -0.28
C9orf3-202ENST00000297979 SLC35E2P0CK97 266 aa13.33□□□□□ -0.28
C9orf3-202ENST00000297979 SEPHS1P49903 392 aa13.33□□□□□ -0.28
C9orf3-202ENST00000297979 MAPK10P53779 464 aa13.33□□□□□ -0.28
C9orf3-202ENST00000297979 HPCAP84074 193 aa13.33□□□□□ -0.28
C9orf3-202ENST00000297979 IL18R1Q13478 541 aa13.33□□□□□ -0.28
C9orf3-202ENST00000297979 GANABQ14697 944 aaKnown RBP13.33□□□□□ -0.28
C9orf3-202ENST00000297979 HEPHL1Q6MZM0 1159 aa13.33□□□□□ -0.28
C9orf3-202ENST00000297979 KANSL1Q7Z3B3 1105 aa13.33□□□□□ -0.28
C9orf3-202ENST00000297979 GATAD2AQ86YP4 633 aa13.33□□□□□ -0.28
C9orf3-202ENST00000297979 OR10G2Q8NGC3 310 aa13.33□□□□□ -0.28
C9orf3-202ENST00000297979 VANGL1Q8TAA9 524 aaPredicted RBP13.33□□□□□ -0.28
C9orf3-202ENST00000297979 SLC9A6Q92581 669 aa13.33□□□□□ -0.28
C9orf3-202ENST00000297979 CDS1Q92903 461 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms