RNA–Protein interactions for RNA: ENST00000297933.10

GAPVD1-202, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GAPVD1, Length 6,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-202ENST00000297933 GAREM2Q75VX8 874 aa6.57□□□□□ -1.36
GAPVD1-202ENST00000297933 TMED4Q7Z7H5 227 aa6.57□□□□□ -1.36
GAPVD1-202ENST00000297933 VWA5B2Q8N398 1253 aa6.57□□□□□ -1.36
GAPVD1-202ENST00000297933 CDRT4Q8N9R6 151 aa6.57□□□□□ -1.36
GAPVD1-202ENST00000297933 OR52E2Q8NGJ4 325 aa6.57□□□□□ -1.36
GAPVD1-202ENST00000297933 OR9A2Q8NGT5 310 aa6.57□□□□□ -1.36
GAPVD1-202ENST00000297933 ELSPBP1Q96BH3 223 aa6.57□□□□□ -1.36
GAPVD1-202ENST00000297933 BORCS6Q96GS4 357 aa6.57□□□□□ -1.36
GAPVD1-202ENST00000297933 BARD1Q99728 777 aaKnown RBP6.57□□□□□ -1.36
GAPVD1-202ENST00000297933 ZNF471Q9BX82 626 aaPredicted RBP6.57□□□□□ -1.36
GAPVD1-202ENST00000297933 KATNBL1Q9H079 304 aa6.57□□□□□ -1.36
GAPVD1-202ENST00000297933 EBF2Q9HAK2 575 aa6.57□□□□□ -1.36
GAPVD1-202ENST00000297933 ZNF175Q9Y473 711 aa6.57□□□□□ -1.36
GAPVD1-202ENST00000297933 TMEM184BQ9Y519 407 aaPredicted RBP6.57□□□□□ -1.36
GAPVD1-202ENST00000297933 DLG5Q8TDM6 1919 aa6.57□□□□□ -1.36
GAPVD1-202ENST00000297933 FLRT2O43155 660 aa6.56□□□□□ -1.36
GAPVD1-202ENST00000297933 ADAM12O43184 909 aa6.56□□□□□ -1.36
GAPVD1-202ENST00000297933 CCNKO75909 580 aa6.56□□□□□ -1.36
GAPVD1-202ENST00000297933 LCKP06239 509 aa6.56□□□□□ -1.36
GAPVD1-202ENST00000297933 PRSS56P0CW18 603 aa6.56□□□□□ -1.36
GAPVD1-202ENST00000297933 CSNK1DP48730 415 aa6.56□□□□□ -1.36
GAPVD1-202ENST00000297933 CHRNEQ04844 493 aa6.56□□□□□ -1.36
GAPVD1-202ENST00000297933 OR7A5Q15622 319 aa6.56□□□□□ -1.36
GAPVD1-202ENST00000297933 TRAM1Q15629 374 aa6.56□□□□□ -1.36
GAPVD1-202ENST00000297933 FAM205BPQ63HN1 556 aa6.56□□□□□ -1.36
GAPVD1-202ENST00000297933 SHQ1Q6PI26 577 aaKnown RBP6.56□□□□□ -1.36
GAPVD1-202ENST00000297933 TMEM184AQ6ZMB5 413 aa6.56□□□□□ -1.36
GAPVD1-202ENST00000297933 C15orf39Q6ZRI6 1047 aa6.56□□□□□ -1.36
GAPVD1-202ENST00000297933 UBALD2Q8IYN6 164 aa6.56□□□□□ -1.36
GAPVD1-202ENST00000297933 CHCHD4Q8N4Q1 142 aa6.56□□□□□ -1.36
GAPVD1-202ENST00000297933 C3orf58Q8NDZ4 430 aa6.56□□□□□ -1.36
GAPVD1-202ENST00000297933 HPS1Q92902 700 aa6.56□□□□□ -1.36
GAPVD1-202ENST00000297933 CNN2Q99439 309 aaKnown RBP6.56□□□□□ -1.36
GAPVD1-202ENST00000297933 PAPOLGQ9BWT3 736 aaKnown RBP6.56□□□□□ -1.36
GAPVD1-202ENST00000297933 IL26Q9NPH9 171 aa6.56□□□□□ -1.36
GAPVD1-202ENST00000297933 OR6C2Q9NZP2 312 aa6.56□□□□□ -1.36
GAPVD1-202ENST00000297933 SH2B3Q9UQQ2 575 aa6.56□□□□□ -1.36
GAPVD1-202ENST00000297933 GIMAP1-GIMAP5A0A087WTJ2 511 aa6.56□□□□□ -1.36
GAPVD1-202ENST00000297933 ZNF850A8MQ14 1090 aa6.56□□□□□ -1.36
GAPVD1-202ENST00000297933 PDLIM1O00151 329 aa6.56□□□□□ -1.36
GAPVD1-202ENST00000297933 CDRT1O95170 752 aa6.56□□□□□ -1.36
GAPVD1-202ENST00000297933 DIRAS3O95661 229 aa6.56□□□□□ -1.36
GAPVD1-202ENST00000297933 PTHP01270 115 aa6.56□□□□□ -1.36
GAPVD1-202ENST00000297933 HOXD8P13378 290 aaPredicted RBP6.56□□□□□ -1.36
GAPVD1-202ENST00000297933 PVRP15151 417 aa6.56□□□□□ -1.36
GAPVD1-202ENST00000297933 CPOXP36551 454 aa6.56□□□□□ -1.36
GAPVD1-202ENST00000297933 HTR3AP46098 478 aa6.56□□□□□ -1.36
GAPVD1-202ENST00000297933 DIO3P55073 304 aa6.56□□□□□ -1.36
GAPVD1-202ENST00000297933 CDH15P55291 814 aa6.56□□□□□ -1.36
GAPVD1-202ENST00000297933 RBM39Q14498 530 aaKnown RBP6.56□□□□□ -1.36
GAPVD1-202ENST00000297933 PPP1R3AQ16821 1122 aa6.56□□□□□ -1.36
GAPVD1-202ENST00000297933 ZFP69Q49AA0 526 aa6.56□□□□□ -1.36
GAPVD1-202ENST00000297933 NKAIN2Q5VXU1 208 aa6.56□□□□□ -1.36
GAPVD1-202ENST00000297933 KIAA1211LQ6NV74 962 aa6.56□□□□□ -1.36
GAPVD1-202ENST00000297933 KCTD9Q7L273 389 aa6.56□□□□□ -1.36
GAPVD1-202ENST00000297933 COMMD6Q7Z4G1 85 aa6.56□□□□□ -1.36
GAPVD1-202ENST00000297933 ARHGAP22Q7Z5H3 698 aa6.56□□□□□ -1.36
GAPVD1-202ENST00000297933 TMEM178AQ8NBL3 297 aa6.56□□□□□ -1.36
GAPVD1-202ENST00000297933 GPR26Q8NDV2 337 aa6.56□□□□□ -1.36
GAPVD1-202ENST00000297933 OR2T4Q8NH00 348 aa6.56□□□□□ -1.36
GAPVD1-202ENST00000297933 SLC6A18Q96N87 628 aa6.56□□□□□ -1.36
GAPVD1-202ENST00000297933 CDC6Q99741 560 aa6.56□□□□□ -1.36
GAPVD1-202ENST00000297933 HDHD5Q9BXW7 423 aa6.56□□□□□ -1.36
GAPVD1-202ENST00000297933 PRSS16Q9NQE7 514 aa6.56□□□□□ -1.36
GAPVD1-202ENST00000297933 OBP2AQ9NY56 170 aa6.56□□□□□ -1.36
GAPVD1-202ENST00000297933 BAIAP2Q9UQB8 552 aa6.56□□□□□ -1.36
GAPVD1-202ENST00000297933 NOP16Q9Y3C1 178 aaKnown RBP6.56□□□□□ -1.36
GAPVD1-202ENST00000297933 KAT6AQ92794 2004 aa6.56□□□□□ -1.36
GAPVD1-202ENST00000297933 TOPAZ1Q8N9V7 1692 aa6.56□□□□□ -1.36
GAPVD1-202ENST00000297933 A6NIZ1 184 aa6.56□□□□□ -1.36
GAPVD1-202ENST00000297933 CLDN25C9JDP6 229 aa6.56□□□□□ -1.36
GAPVD1-202ENST00000297933 KIAA0355O15063 1070 aa6.56□□□□□ -1.36
GAPVD1-202ENST00000297933 LDB3O75112 727 aa6.56□□□□□ -1.36
GAPVD1-202ENST00000297933 WDPCPO95876 746 aa6.56□□□□□ -1.36
GAPVD1-202ENST00000297933 PNMTP11086 282 aa6.56□□□□□ -1.36
GAPVD1-202ENST00000297933 PRKACGP22612 351 aa6.56□□□□□ -1.36
GAPVD1-202ENST00000297933 ADH7P40394 386 aa6.56□□□□□ -1.36
GAPVD1-202ENST00000297933 FRKP42685 505 aaPredicted RBP6.56□□□□□ -1.36
GAPVD1-202ENST00000297933 GPR4P46093 362 aa6.56□□□□□ -1.36
GAPVD1-202ENST00000297933 GCGRP47871 477 aa6.56□□□□□ -1.36
GAPVD1-202ENST00000297933 AFF1P51825 1210 aaKnown RBP6.56□□□□□ -1.36
GAPVD1-202ENST00000297933 SLC26A5P58743 744 aa6.56□□□□□ -1.36
GAPVD1-202ENST00000297933 RAP1BP61224 184 aa6.56□□□□□ -1.36
GAPVD1-202ENST00000297933 RAP1AP62834 184 aa6.56□□□□□ -1.36
GAPVD1-202ENST00000297933 RACK1P63244 317 aaKnown RBP6.56□□□□□ -1.36
GAPVD1-202ENST00000297933 LACTB2Q53H82 288 aaPredicted RBP6.56□□□□□ -1.36
GAPVD1-202ENST00000297933 PACRGLQ8N7B6 248 aa6.56□□□□□ -1.36
GAPVD1-202ENST00000297933 ZNF610Q8N9Z0 462 aa6.56□□□□□ -1.36
GAPVD1-202ENST00000297933 KDM1BQ8NB78 822 aa6.56□□□□□ -1.36
GAPVD1-202ENST00000297933 GALNT11Q8NCW6 608 aa6.56□□□□□ -1.36
GAPVD1-202ENST00000297933 LMO3Q8TAP4 145 aa6.56□□□□□ -1.36
GAPVD1-202ENST00000297933 THAP6Q8TBB0 222 aa6.56□□□□□ -1.36
GAPVD1-202ENST00000297933 SCP2D1Q9UJQ7 156 aa6.56□□□□□ -1.36
GAPVD1-202ENST00000297933 ACSL6Q9UKU0 697 aa6.56□□□□□ -1.36
GAPVD1-202ENST00000297933 KCNIP3Q9Y2W7 256 aa6.56□□□□□ -1.36
GAPVD1-202ENST00000297933 SPO11Q9Y5K1 396 aa6.56□□□□□ -1.36
GAPVD1-202ENST00000297933 SMAD9O15198 467 aaKnown RBP6.56□□□□□ -1.36
GAPVD1-202ENST00000297933 CNOT4O95628 575 aaKnown RBP6.56□□□□□ -1.36
GAPVD1-202ENST00000297933 SSR4P51571 173 aa6.56□□□□□ -1.36
GAPVD1-202ENST00000297933 WDR4P57081 412 aaKnown RBP6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms