RNA–Protein interactions for RNA: ENST00000296098.4

TRIM54-201, Transcript of tripartite motif containing 54, humanhuman

TSL 1 (best) BASIC

Gene TRIM54, Length 2,027 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54-201ENST00000296098 ITGADQ13349 1161 aa22.48■■□□□ 1.19
TRIM54-201ENST00000296098 RGS21Q2M5E4 152 aa22.48■■□□□ 1.19
TRIM54-201ENST00000296098 MEDAGQ5VYS4 303 aa22.48■■□□□ 1.19
TRIM54-201ENST00000296098 DCDC5Q6ZRR9 648 aa22.48■■□□□ 1.19
TRIM54-201ENST00000296098 BTLAQ7Z6A9 289 aa22.48■■□□□ 1.19
TRIM54-201ENST00000296098 VRK2Q86Y07 508 aa22.48■■□□□ 1.19
TRIM54-201ENST00000296098 MFSD4AQ8N468 514 aa22.48■■□□□ 1.19
TRIM54-201ENST00000296098 SMRP1Q8NCR6 262 aa22.48■■□□□ 1.19
TRIM54-201ENST00000296098 OR7G2Q8NG99 324 aa22.48■■□□□ 1.19
TRIM54-201ENST00000296098 ADAMTS15Q8TE58 950 aa22.48■■□□□ 1.19
TRIM54-201ENST00000296098 CHPT1Q8WUD6 406 aa22.48■■□□□ 1.19
TRIM54-201ENST00000296098 PILRAQ9UKJ1 303 aa22.48■■□□□ 1.19
TRIM54-201ENST00000296098 MMP17Q9ULZ9 603 aa22.48■■□□□ 1.19
TRIM54-201ENST00000296098 IFT52Q9Y366 437 aa22.48■■□□□ 1.19
TRIM54-201ENST00000296098 SCN3AQ9NY46 2000 aa22.47■■□□□ 1.19
TRIM54-201ENST00000296098 SULT1C4O75897 302 aa22.47■■□□□ 1.19
TRIM54-201ENST00000296098 ZNF10P21506 573 aaPredicted RBP22.47■■□□□ 1.19
TRIM54-201ENST00000296098 TAS2R41P59536 307 aa22.47■■□□□ 1.19
TRIM54-201ENST00000296098 FAM214AQ32MH5 1076 aa22.47■■□□□ 1.19
TRIM54-201ENST00000296098 C6orf132Q5T0Z8 1188 aa22.47■■□□□ 1.19
TRIM54-201ENST00000296098 MFSD12Q6NUT3 480 aa22.47■■□□□ 1.19
TRIM54-201ENST00000296098 C1orf94Q6P1W5 598 aa22.47■■□□□ 1.19
TRIM54-201ENST00000296098 ABHD13Q7L211 337 aa22.47■■□□□ 1.19
TRIM54-201ENST00000296098 GJD3Q8N144 294 aa22.47■■□□□ 1.19
TRIM54-201ENST00000296098 IQCF1Q8N6M8 205 aa22.47■■□□□ 1.19
TRIM54-201ENST00000296098 CAMKVQ8NCB2 501 aa22.47■■□□□ 1.19
TRIM54-201ENST00000296098 OR4K14Q8NGD5 310 aa22.47■■□□□ 1.19
TRIM54-201ENST00000296098 COX4I2Q96KJ9 171 aa22.47■■□□□ 1.19
TRIM54-201ENST00000296098 KLHL25Q9H0H3 589 aa22.47■■□□□ 1.19
TRIM54-201ENST00000296098 TRIM45Q9H8W5 580 aaPredicted RBP22.47■■□□□ 1.19
TRIM54-201ENST00000296098 RHBDL2Q9NX52 303 aa22.47■■□□□ 1.19
TRIM54-201ENST00000296098 NTMQ9P121 344 aa22.47■■□□□ 1.19
TRIM54-201ENST00000296098 DAPP1Q9UN19 280 aa22.47■■□□□ 1.19
TRIM54-201ENST00000296098 CEP290O15078 2479 aa22.47■■□□□ 1.19
TRIM54-201ENST00000296098 DUXAA6NLW8 204 aa22.47■■□□□ 1.19
TRIM54-201ENST00000296098 BMP4P12644 408 aa22.47■■□□□ 1.19
TRIM54-201ENST00000296098 TLX1P31314 330 aaPredicted RBP22.47■■□□□ 1.19
TRIM54-201ENST00000296098 GRK5P34947 590 aa22.47■■□□□ 1.19
TRIM54-201ENST00000296098 ATP1A4Q13733 1029 aa22.47■■□□□ 1.19
TRIM54-201ENST00000296098 RUNX2Q13950 521 aa22.47■■□□□ 1.19
TRIM54-201ENST00000296098 MED22Q15528 200 aa22.47■■□□□ 1.19
TRIM54-201ENST00000296098 INAVAQ3KP66 663 aa22.47■■□□□ 1.19
TRIM54-201ENST00000296098 WDR53Q7Z5U6 358 aaPredicted RBP22.47■■□□□ 1.19
TRIM54-201ENST00000296098 CENPSQ8N2Z9 138 aa22.47■■□□□ 1.19
TRIM54-201ENST00000296098 DRAXINQ8NBI3 349 aaPredicted RBP22.47■■□□□ 1.19
TRIM54-201ENST00000296098 KBTBD8Q8NFY9 601 aa22.47■■□□□ 1.19
TRIM54-201ENST00000296098 OR13H1Q8NG92 308 aa22.47■■□□□ 1.19
TRIM54-201ENST00000296098 HMGB4Q8WW32 186 aa22.47■■□□□ 1.19
TRIM54-201ENST00000296098 COL26A1Q96A83 441 aa22.47■■□□□ 1.19
TRIM54-201ENST00000296098 OR5M11Q96RB7 305 aa22.47■■□□□ 1.19
TRIM54-201ENST00000296098 ZFYVE21Q9BQ24 234 aa22.47■■□□□ 1.19
TRIM54-201ENST00000296098 ARMC7Q9H6L4 198 aa22.47■■□□□ 1.19
TRIM54-201ENST00000296098 PCDHGA3Q9Y5H0 932 aa22.47■■□□□ 1.19
TRIM54-201ENST00000296098 HS3ST3A1Q9Y663 406 aa22.47■■□□□ 1.19
TRIM54-201ENST00000296098 GSTM3P21266 225 aa22.46■■□□□ 1.19
TRIM54-201ENST00000296098 SIM1P81133 766 aaPredicted RBP22.46■■□□□ 1.19
TRIM54-201ENST00000296098 MFSD4BQ5TF39 518 aa22.46■■□□□ 1.19
TRIM54-201ENST00000296098 HEPHL1Q6MZM0 1159 aa22.46■■□□□ 1.19
TRIM54-201ENST00000296098 CDC73Q6P1J9 531 aa22.46■■□□□ 1.19
TRIM54-201ENST00000296098 TCEANCQ8N8B7 351 aa22.46■■□□□ 1.19
TRIM54-201ENST00000296098 MCFD2Q8NI22 146 aa22.46■■□□□ 1.19
TRIM54-201ENST00000296098 ZFPM2Q8WW38 1151 aa22.46■■□□□ 1.19
TRIM54-201ENST00000296098 PATE1Q8WXA2 126 aa22.46■■□□□ 1.19
TRIM54-201ENST00000296098 SLC35A4Q96G79 324 aa22.46■■□□□ 1.19
TRIM54-201ENST00000296098 POT1Q9NUX5 634 aa22.46■■□□□ 1.19
TRIM54-201ENST00000296098 LOC100506127A0A0U1RQW1 187 aa22.45■■□□□ 1.18
TRIM54-201ENST00000296098 CBFA2T3O75081 653 aa22.45■■□□□ 1.18
TRIM54-201ENST00000296098 PRKAR1BP31321 381 aa22.45■■□□□ 1.18
TRIM54-201ENST00000296098 RABIFP47224 123 aa22.45■■□□□ 1.18
TRIM54-201ENST00000296098 PDX1P52945 283 aa22.45■■□□□ 1.18
TRIM54-201ENST00000296098 ZNF91Q05481 1191 aa22.45■■□□□ 1.18
TRIM54-201ENST00000296098 INAQ16352 499 aa22.45■■□□□ 1.18
TRIM54-201ENST00000296098 OCLNQ16625 522 aa22.45■■□□□ 1.18
TRIM54-201ENST00000296098 ENTPD8Q5MY95 495 aa22.45■■□□□ 1.18
TRIM54-201ENST00000296098 RERGQ96A58 199 aaPredicted RBP22.45■■□□□ 1.18
TRIM54-201ENST00000296098 MGLLQ99685 303 aa22.45■■□□□ 1.18
TRIM54-201ENST00000296098 POLDIP3Q9BY77 421 aaKnown RBP22.45■■□□□ 1.18
TRIM54-201ENST00000296098 OR51E2Q9H255 320 aa22.45■■□□□ 1.18
TRIM54-201ENST00000296098 PRDM9Q9NQV7 894 aa22.45■■□□□ 1.18
TRIM54-201ENST00000296098 TVP23BQ9NYZ1 205 aa22.45■■□□□ 1.18
TRIM54-201ENST00000296098 GPR55Q9Y2T6 319 aaPredicted RBP22.45■■□□□ 1.18
TRIM54-201ENST00000296098 RPL36Q9Y3U8 105 aaKnown RBP22.45■■□□□ 1.18
TRIM54-201ENST00000296098 LOC105369274A0A096LPK9 316 aa22.45■■□□□ 1.18
TRIM54-201ENST00000296098 LOC102723532A0A0G2JNH3 316 aa22.45■■□□□ 1.18
TRIM54-201ENST00000296098 C2orf74A8MZ97 194 aa22.45■■□□□ 1.18
TRIM54-201ENST00000296098 FRS3O43559 492 aa22.45■■□□□ 1.18
TRIM54-201ENST00000296098 ZIC2O95409 532 aaPredicted RBP22.45■■□□□ 1.18
TRIM54-201ENST00000296098 AGR2O95994 175 aa22.45■■□□□ 1.18
TRIM54-201ENST00000296098 TNFP01375 233 aa22.45■■□□□ 1.18
TRIM54-201ENST00000296098 OCM2P0CE71 109 aa22.45■■□□□ 1.18
TRIM54-201ENST00000296098 OCMP0CE72 109 aaPredicted RBP22.45■■□□□ 1.18
TRIM54-201ENST00000296098 LSM11P83369 360 aaKnown RBP eCLIP22.45■■□□□ 1.18
TRIM54-201ENST00000296098 OR4N4Q8N0Y3 316 aa22.45■■□□□ 1.18
TRIM54-201ENST00000296098 SLC22A18ASQ8N1D0 253 aa22.45■■□□□ 1.18
TRIM54-201ENST00000296098 OR2L13Q8N349 312 aa22.45■■□□□ 1.18
TRIM54-201ENST00000296098 SLC16A11Q8NCK7 471 aa22.45■■□□□ 1.18
TRIM54-201ENST00000296098 CDS1Q92903 461 aa22.45■■□□□ 1.18
TRIM54-201ENST00000296098 ZG16BQ96DA0 208 aa22.45■■□□□ 1.18
TRIM54-201ENST00000296098 GPA33Q99795 319 aa22.45■■□□□ 1.18
TRIM54-201ENST00000296098 KLHL28Q9NXS3 571 aa22.45■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms