RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 CCDC116Q8IYX3 515 aa12.75□□□□□ -0.37
HPS3-201ENST00000296051 ZDHHC1Q8WTX9 485 aa12.75□□□□□ -0.37
HPS3-201ENST00000296051 RFT1Q96AA3 541 aa12.75□□□□□ -0.37
HPS3-201ENST00000296051 FKBP7Q9Y680 259 aa12.75□□□□□ -0.37
HPS3-201ENST00000296051 COL18A1P39060 1754 aa12.75□□□□□ -0.37
HPS3-201ENST00000296051 ALPPP05187 535 aa12.75□□□□□ -0.37
HPS3-201ENST00000296051 SPINT3P49223 89 aa12.75□□□□□ -0.37
HPS3-201ENST00000296051 GRIN2CQ14957 1233 aa12.75□□□□□ -0.37
HPS3-201ENST00000296051 NTRK2Q16620 822 aa12.75□□□□□ -0.37
HPS3-201ENST00000296051 DECR1Q16698 335 aa12.75□□□□□ -0.37
HPS3-201ENST00000296051 B3GLCTQ6Y288 498 aa12.75□□□□□ -0.37
HPS3-201ENST00000296051 TMEM179BQ7Z7N9 219 aa12.75□□□□□ -0.37
HPS3-201ENST00000296051 YIPF7Q8N8F6 280 aa12.75□□□□□ -0.37
HPS3-201ENST00000296051 ASB12Q8WXK4 309 aa12.75□□□□□ -0.37
HPS3-201ENST00000296051 PRTFDC1Q9NRG1 225 aa12.75□□□□□ -0.37
HPS3-201ENST00000296051 STRCP1A6NGW2 1772 aa12.75□□□□□ -0.37
HPS3-201ENST00000296051 M0R3H8 397 aa12.74□□□□□ -0.37
HPS3-201ENST00000296051 PROM1O43490 865 aa12.74□□□□□ -0.37
HPS3-201ENST00000296051 CYP17A1P05093 508 aa12.74□□□□□ -0.37
HPS3-201ENST00000296051 SSTR2P30874 369 aa12.74□□□□□ -0.37
HPS3-201ENST00000296051 SELENOWP63302 87 aa12.74□□□□□ -0.37
HPS3-201ENST00000296051 CDKN3Q16667 212 aa12.74□□□□□ -0.37
HPS3-201ENST00000296051 TATDN3Q17R31 274 aa12.74□□□□□ -0.37
HPS3-201ENST00000296051 OR2G6Q5TZ20 316 aa12.74□□□□□ -0.37
HPS3-201ENST00000296051 PLAG1Q6DJT9 500 aa12.74□□□□□ -0.37
HPS3-201ENST00000296051 SCRN2Q96FV2 425 aa12.74□□□□□ -0.37
HPS3-201ENST00000296051 SHROOM3Q8TF72 1996 aa12.74□□□□□ -0.37
HPS3-201ENST00000296051 LRP5O75197 1615 aa12.74□□□□□ -0.37
HPS3-201ENST00000296051 OR7A17O14581 309 aa12.74□□□□□ -0.37
HPS3-201ENST00000296051 LYRM1O43325 122 aa12.74□□□□□ -0.37
HPS3-201ENST00000296051 KHKP50053 298 aa12.74□□□□□ -0.37
HPS3-201ENST00000296051 ZNF140P52738 457 aaPredicted RBP12.74□□□□□ -0.37
HPS3-201ENST00000296051 C4orf46Q504U0 113 aa12.74□□□□□ -0.37
HPS3-201ENST00000296051 SLC27A4Q6P1M0 643 aa12.74□□□□□ -0.37
HPS3-201ENST00000296051 OR4K5Q8NGD3 323 aa12.74□□□□□ -0.37
HPS3-201ENST00000296051 SLC35B4Q969S0 331 aa12.74□□□□□ -0.37
HPS3-201ENST00000296051 F2RL3Q96RI0 385 aa12.74□□□□□ -0.37
HPS3-201ENST00000296051 UBE2ZQ9H832 354 aaPredicted RBP12.74□□□□□ -0.37
HPS3-201ENST00000296051 SARDHQ9UL12 918 aa12.74□□□□□ -0.37
HPS3-201ENST00000296051 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.74□□□□□ -0.37
HPS3-201ENST00000296051 OR52A4PA6NMU1 304 aa12.74□□□□□ -0.37
HPS3-201ENST00000296051 ARHGAP33O14559 1287 aa12.74□□□□□ -0.37
HPS3-201ENST00000296051 POLR1CO15160 346 aaPredicted RBP12.74□□□□□ -0.37
HPS3-201ENST00000296051 IL1RNP18510 177 aa12.74□□□□□ -0.37
HPS3-201ENST00000296051 POU4F3Q15319 338 aa12.74□□□□□ -0.37
HPS3-201ENST00000296051 MICAQ29983 383 aa12.74□□□□□ -0.37
HPS3-201ENST00000296051 OAFQ86UD1 273 aa12.74□□□□□ -0.37
HPS3-201ENST00000296051 GPR150Q8NGU9 434 aa12.74□□□□□ -0.37
HPS3-201ENST00000296051 OR8K3Q8NH51 312 aa12.74□□□□□ -0.37
HPS3-201ENST00000296051 CACNG6Q9BXT2 260 aa12.74□□□□□ -0.37
HPS3-201ENST00000296051 NUDT15Q9NV35 164 aa12.74□□□□□ -0.37
HPS3-201ENST00000296051 MROH6A6NGR9 719 aa12.74□□□□□ -0.37
HPS3-201ENST00000296051 FAM155AB1AL88 458 aaPredicted RBP12.74□□□□□ -0.37
HPS3-201ENST00000296051 ANHXE9PGG2 379 aa12.74□□□□□ -0.37
HPS3-201ENST00000296051 PRAMEF26H0Y7S4 382 aa12.74□□□□□ -0.37
HPS3-201ENST00000296051 APOC3P02656 99 aa12.74□□□□□ -0.37
HPS3-201ENST00000296051 PROS1P07225 676 aa12.74□□□□□ -0.37
HPS3-201ENST00000296051 ZNF823P16415 610 aa12.74□□□□□ -0.37
HPS3-201ENST00000296051 FRMPD2BQ6IN97 320 aa12.74□□□□□ -0.37
HPS3-201ENST00000296051 LRRC69Q6ZNQ3 347 aa12.74□□□□□ -0.37
HPS3-201ENST00000296051 ZNF527Q8NB42 609 aa12.74□□□□□ -0.37
HPS3-201ENST00000296051 OR51A7Q8NH64 312 aa12.74□□□□□ -0.37
HPS3-201ENST00000296051 RIT1Q92963 219 aa12.74□□□□□ -0.37
HPS3-201ENST00000296051 TMEM19Q96HH6 336 aa12.74□□□□□ -0.37
HPS3-201ENST00000296051 DCBLD2Q96PD2 775 aa12.74□□□□□ -0.37
HPS3-201ENST00000296051 SORBS1Q9BX66 1292 aaKnown RBP12.74□□□□□ -0.37
HPS3-201ENST00000296051 CLMPQ9H6B4 373 aa12.74□□□□□ -0.37
HPS3-201ENST00000296051 PTGES2Q9H7Z7 377 aa12.74□□□□□ -0.37
HPS3-201ENST00000296051 FBRSQ9HAH7 460 aa12.74□□□□□ -0.37
HPS3-201ENST00000296051 INIPQ9NRY2 104 aa12.74□□□□□ -0.37
HPS3-201ENST00000296051 MLXQ9UH92 298 aa12.74□□□□□ -0.37
HPS3-201ENST00000296051 SCML1Q9UN30 329 aa12.74□□□□□ -0.37
HPS3-201ENST00000296051 ENPP4Q9Y6X5 453 aa12.74□□□□□ -0.37
HPS3-201ENST00000296051 ANKRD28O15084 1053 aa12.73□□□□□ -0.37
HPS3-201ENST00000296051 JUNBP17275 347 aaPredicted RBP12.73□□□□□ -0.37
HPS3-201ENST00000296051 HK1P19367 917 aa12.73□□□□□ -0.37
HPS3-201ENST00000296051 EIF2DP41214 584 aaKnown RBP12.73□□□□□ -0.37
HPS3-201ENST00000296051 MBTPS1Q14703 1052 aa12.73□□□□□ -0.37
HPS3-201ENST00000296051 ENTHD1Q8IYW4 607 aa12.73□□□□□ -0.37
HPS3-201ENST00000296051 DNAJC5GQ8N7S2 189 aa12.73□□□□□ -0.37
HPS3-201ENST00000296051 LKAAEAR1Q8TD35 194 aa12.73□□□□□ -0.37
HPS3-201ENST00000296051 NEDD4LQ96PU5 975 aa12.73□□□□□ -0.37
HPS3-201ENST00000296051 SLC22A12Q96S37 553 aa12.73□□□□□ -0.37
HPS3-201ENST00000296051 BCL7BQ9BQE9 202 aa12.73□□□□□ -0.37
HPS3-201ENST00000296051 SLC35C2Q9NQQ7 365 aa12.73□□□□□ -0.37
HPS3-201ENST00000296051 TMEM221A6NGB7 291 aa12.73□□□□□ -0.37
HPS3-201ENST00000296051 GABRR3A8MPY1 467 aa12.73□□□□□ -0.37
HPS3-201ENST00000296051 JRKO75564 520 aa12.73□□□□□ -0.37
HPS3-201ENST00000296051 ANXA3P12429 323 aa12.73□□□□□ -0.37
HPS3-201ENST00000296051 APEX1P27695 318 aaKnown RBP12.73□□□□□ -0.37
HPS3-201ENST00000296051 LCN1P31025 176 aa12.73□□□□□ -0.37
HPS3-201ENST00000296051 PYCR1P32322 319 aa12.73□□□□□ -0.37
HPS3-201ENST00000296051 SELENBP1Q13228 472 aa12.73□□□□□ -0.37
HPS3-201ENST00000296051 C6orf120Q7Z4R8 191 aa12.73□□□□□ -0.37
HPS3-201ENST00000296051 TMED4Q7Z7H5 227 aa12.73□□□□□ -0.37
HPS3-201ENST00000296051 CSNK1A1LQ8N752 337 aa12.73□□□□□ -0.37
HPS3-201ENST00000296051 HMGCLL1Q8TB92 370 aa12.73□□□□□ -0.37
HPS3-201ENST00000296051 MGME1Q9BQP7 344 aa12.73□□□□□ -0.37
HPS3-201ENST00000296051 SEC61A2Q9H9S3 476 aa12.73□□□□□ -0.37
HPS3-201ENST00000296051 CA5BQ9Y2D0 317 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms