RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 OR5AR1Q8NGP9 310 aa12.14□□□□□ -0.47
PTCD1-201ENST00000292478 JPH3Q8WXH2 748 aaPredicted RBP12.14□□□□□ -0.47
PTCD1-201ENST00000292478 CLMPQ9H6B4 373 aa12.14□□□□□ -0.47
PTCD1-201ENST00000292478 GPR83Q9NYM4 423 aa12.14□□□□□ -0.47
PTCD1-201ENST00000292478 GLS2Q9UI32 602 aa12.14□□□□□ -0.47
PTCD1-201ENST00000292478 FARSAQ9Y285 508 aaKnown RBP12.14□□□□□ -0.47
PTCD1-201ENST00000292478 ASB4Q9Y574 426 aa12.14□□□□□ -0.47
PTCD1-201ENST00000292478 SMAD6O43541 496 aaKnown RBP12.13□□□□□ -0.47
PTCD1-201ENST00000292478 DNAJB6O75190 326 aa12.13□□□□□ -0.47
PTCD1-201ENST00000292478 AOAHP28039 575 aa12.13□□□□□ -0.47
PTCD1-201ENST00000292478 NAA10P41227 235 aaPredicted RBP12.13□□□□□ -0.47
PTCD1-201ENST00000292478 GPR4P46093 362 aa12.13□□□□□ -0.47
PTCD1-201ENST00000292478 CXCR4P61073 352 aa12.13□□□□□ -0.47
PTCD1-201ENST00000292478 C1orf61Q13536 156 aa12.13□□□□□ -0.47
PTCD1-201ENST00000292478 TBRG1Q3YBR2 411 aa12.13□□□□□ -0.47
PTCD1-201ENST00000292478 LNX2Q8N448 690 aa12.13□□□□□ -0.47
PTCD1-201ENST00000292478 UCKL1Q9NWZ5 548 aa12.13□□□□□ -0.47
PTCD1-201ENST00000292478 EBF1Q9UH73 591 aa12.13□□□□□ -0.47
PTCD1-201ENST00000292478 NUFIP1Q9UHK0 495 aaKnown RBP12.13□□□□□ -0.47
PTCD1-201ENST00000292478 KCNIP3Q9Y2W7 256 aa12.13□□□□□ -0.47
PTCD1-201ENST00000292478 ACTL7AQ9Y615 435 aa12.13□□□□□ -0.47
PTCD1-201ENST00000292478 MYOCOSA0A1B0GUC4 107 aa12.13□□□□□ -0.47
PTCD1-201ENST00000292478 MROH6A6NGR9 719 aa12.13□□□□□ -0.47
PTCD1-201ENST00000292478 PNMTP11086 282 aa12.13□□□□□ -0.47
PTCD1-201ENST00000292478 TIMP2P16035 220 aa12.13□□□□□ -0.47
PTCD1-201ENST00000292478 CD40LGP29965 261 aa12.13□□□□□ -0.47
PTCD1-201ENST00000292478 RBMXP38159 391 aaKnown RBP12.13□□□□□ -0.47
PTCD1-201ENST00000292478 PRLHRP49683 370 aa12.13□□□□□ -0.47
PTCD1-201ENST00000292478 HSD11B2P80365 405 aa12.13□□□□□ -0.47
PTCD1-201ENST00000292478 SIM1P81133 766 aaPredicted RBP12.13□□□□□ -0.47
PTCD1-201ENST00000292478 KCTD11Q693B1 232 aa12.13□□□□□ -0.47
PTCD1-201ENST00000292478 FIGNL1Q6PIW4 674 aa12.13□□□□□ -0.47
PTCD1-201ENST00000292478 GDPD1Q8N9F7 314 aa12.13□□□□□ -0.47
PTCD1-201ENST00000292478 FAM46AQ96IP4 442 aaKnown RBP12.13□□□□□ -0.47
PTCD1-201ENST00000292478 TIMM29Q9BSF4 260 aa12.13□□□□□ -0.47
PTCD1-201ENST00000292478 MRI1Q9BV20 369 aa12.13□□□□□ -0.47
PTCD1-201ENST00000292478 LINC00597Q9H2U6 94 aa12.13□□□□□ -0.47
PTCD1-201ENST00000292478 EEF1E1O43324 174 aaKnown RBP12.13□□□□□ -0.47
PTCD1-201ENST00000292478 THEGLP0DJG4 465 aa12.13□□□□□ -0.47
PTCD1-201ENST00000292478 GTF2F2P13984 249 aa12.13□□□□□ -0.47
PTCD1-201ENST00000292478 S100A10P60903 97 aa12.13□□□□□ -0.47
PTCD1-201ENST00000292478 SLC18B1Q6NT16 456 aa12.13□□□□□ -0.47
PTCD1-201ENST00000292478 PAQR9Q6ZVX9 377 aa12.13□□□□□ -0.47
PTCD1-201ENST00000292478 PROKR1Q8TCW9 393 aa12.13□□□□□ -0.47
PTCD1-201ENST00000292478 ACPTQ9BZG2 426 aa12.13□□□□□ -0.47
PTCD1-201ENST00000292478 KATNBL1Q9H079 304 aa12.13□□□□□ -0.47
PTCD1-201ENST00000292478 GPN2Q9H9Y4 310 aaPredicted RBP12.13□□□□□ -0.47
PTCD1-201ENST00000292478 FOLH1BQ9HBA9 442 aa12.13□□□□□ -0.47
PTCD1-201ENST00000292478 PRAMEF26H0Y7S4 382 aa12.13□□□□□ -0.47
PTCD1-201ENST00000292478 PTTG1O95997 202 aa12.13□□□□□ -0.47
PTCD1-201ENST00000292478 GNAO1P09471 354 aa12.13□□□□□ -0.47
PTCD1-201ENST00000292478 CEBPGP53567 150 aa12.13□□□□□ -0.47
PTCD1-201ENST00000292478 GTDC1Q4AE62 458 aa12.13□□□□□ -0.47
PTCD1-201ENST00000292478 NRMQ8IXM6 262 aa12.13□□□□□ -0.47
PTCD1-201ENST00000292478 MAL2Q969L2 176 aa12.13□□□□□ -0.47
PTCD1-201ENST00000292478 DDIT4LQ96D03 193 aa12.13□□□□□ -0.47
PTCD1-201ENST00000292478 CLSTN3Q9BQT9 956 aa12.13□□□□□ -0.47
PTCD1-201ENST00000292478 ATG5Q9H1Y0 275 aa12.13□□□□□ -0.47
PTCD1-201ENST00000292478 TMEM165Q9HC07 324 aa12.13□□□□□ -0.47
PTCD1-201ENST00000292478 HSPB11Q9Y547 144 aa12.13□□□□□ -0.47
PTCD1-201ENST00000292478 A0A0J9YY10 115 aa12.13□□□□□ -0.47
PTCD1-201ENST00000292478 PLD2O14939 933 aa12.13□□□□□ -0.47
PTCD1-201ENST00000292478 TPD52L2O43399 206 aaKnown RBP12.13□□□□□ -0.47
PTCD1-201ENST00000292478 NDUFB2O95178 105 aa12.13□□□□□ -0.47
PTCD1-201ENST00000292478 IL33O95760 270 aa12.13□□□□□ -0.47
PTCD1-201ENST00000292478 H2AFB2P0C5Z0 115 aa12.13□□□□□ -0.47
PTCD1-201ENST00000292478 WDR5P61964 334 aaKnown RBP12.13□□□□□ -0.47
PTCD1-201ENST00000292478 SHFQ7M4L6 423 aa12.13□□□□□ -0.47
PTCD1-201ENST00000292478 DCP2Q8IU60 420 aaKnown RBP12.13□□□□□ -0.47
PTCD1-201ENST00000292478 OR52E2Q8NGJ4 325 aa12.13□□□□□ -0.47
PTCD1-201ENST00000292478 ASB11Q8WXH4 323 aa12.13□□□□□ -0.47
PTCD1-201ENST00000292478 TFAP2CQ92754 450 aa12.13□□□□□ -0.47
PTCD1-201ENST00000292478 LHPPQ9H008 270 aa12.13□□□□□ -0.47
PTCD1-201ENST00000292478 SRA1Q9HD15 236 aaKnown RBP12.13□□□□□ -0.47
PTCD1-201ENST00000292478 LHX3Q9UBR4 397 aa12.13□□□□□ -0.47
PTCD1-201ENST00000292478 MYH10P35580 1976 aa12.12□□□□□ -0.47
PTCD1-201ENST00000292478 KIR2DS5A0A0G2JLQ3 304 aa12.12□□□□□ -0.47
PTCD1-201ENST00000292478 A0A0G2JNG1 304 aa12.12□□□□□ -0.47
PTCD1-201ENST00000292478 C13orf42A0A1B0GVH6 325 aa12.12□□□□□ -0.47
PTCD1-201ENST00000292478 KIR2DS3K7RE56 304 aa12.12□□□□□ -0.47
PTCD1-201ENST00000292478 M0R233 179 aa12.12□□□□□ -0.47
PTCD1-201ENST00000292478 PROS1P07225 676 aa12.12□□□□□ -0.47
PTCD1-201ENST00000292478 APOFQ13790 326 aa12.12□□□□□ -0.47
PTCD1-201ENST00000292478 KIR2DS5Q14953 304 aa12.12□□□□□ -0.47
PTCD1-201ENST00000292478 RAB12Q6IQ22 244 aa12.12□□□□□ -0.47
PTCD1-201ENST00000292478 NEIL2Q969S2 332 aa12.12□□□□□ -0.47
PTCD1-201ENST00000292478 RIMS3Q9UJD0 308 aa12.12□□□□□ -0.47
PTCD1-201ENST00000292478 CLEC4EQ9ULY5 219 aa12.12□□□□□ -0.47
PTCD1-201ENST00000292478 ZSCAN5BA6NJL1 495 aa12.12□□□□□ -0.47
PTCD1-201ENST00000292478 MITFO75030 526 aaPredicted RBP12.12□□□□□ -0.47
PTCD1-201ENST00000292478 RP2O75695 350 aa12.12□□□□□ -0.47
PTCD1-201ENST00000292478 MAGEA3P43357 314 aa12.12□□□□□ -0.47
PTCD1-201ENST00000292478 IST1P53990 364 aa12.12□□□□□ -0.47
PTCD1-201ENST00000292478 GRK1Q15835 563 aa12.12□□□□□ -0.47
PTCD1-201ENST00000292478 CTSL3PQ5NE16 218 aa12.12□□□□□ -0.47
PTCD1-201ENST00000292478 GPR149Q86SP6 731 aa12.12□□□□□ -0.47
PTCD1-201ENST00000292478 TMPRSS12Q86WS5 348 aa12.12□□□□□ -0.47
PTCD1-201ENST00000292478 ANKK1Q8NFD2 765 aa12.12□□□□□ -0.47
PTCD1-201ENST00000292478 FBXO27Q8NI29 283 aa12.12□□□□□ -0.47
PTCD1-201ENST00000292478 DHRS1Q96LJ7 313 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms