RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 TBC1D20Q96BZ9 403 aa7.9□□□□□ -1.15
PTPDC1-201ENST00000288976 ART5Q96L15 291 aa7.9□□□□□ -1.15
PTPDC1-201ENST00000288976 ZNF681Q96N22 645 aa7.9□□□□□ -1.15
PTPDC1-201ENST00000288976 PRRG3Q9BZD7 231 aa7.9□□□□□ -1.15
PTPDC1-201ENST00000288976 PAIP1Q9H074 479 aaKnown RBP7.9□□□□□ -1.15
PTPDC1-201ENST00000288976 RIBC2Q9H4K1 309 aa7.9□□□□□ -1.15
PTPDC1-201ENST00000288976 SEMA3GQ9NS98 782 aa7.9□□□□□ -1.15
PTPDC1-201ENST00000288976 MRTO4Q9UKD2 239 aaKnown RBP7.9□□□□□ -1.15
PTPDC1-201ENST00000288976 CAB39Q9Y376 341 aaPredicted RBP7.9□□□□□ -1.15
PTPDC1-201ENST00000288976 IGKV3D-11A0A0A0MRZ8 115 aa7.89□□□□□ -1.15
PTPDC1-201ENST00000288976 CFAP73A6NFT4 308 aa7.89□□□□□ -1.15
PTPDC1-201ENST00000288976 PLD2O14939 933 aa7.89□□□□□ -1.15
PTPDC1-201ENST00000288976 PDE5AO76074 875 aa7.89□□□□□ -1.15
PTPDC1-201ENST00000288976 IL33O95760 270 aa7.89□□□□□ -1.15
PTPDC1-201ENST00000288976 GPR75O95800 540 aa7.89□□□□□ -1.15
PTPDC1-201ENST00000288976 IGHEP01854 428 aa7.89□□□□□ -1.15
PTPDC1-201ENST00000288976 SLC35E2P0CK97 266 aa7.89□□□□□ -1.15
PTPDC1-201ENST00000288976 UQCRC2P22695 453 aa7.89□□□□□ -1.15
PTPDC1-201ENST00000288976 SHC2P98077 582 aa7.89□□□□□ -1.15
PTPDC1-201ENST00000288976 TBCELQ5QJ74 424 aa7.89□□□□□ -1.15
PTPDC1-201ENST00000288976 DLEU7Q6UYE1 221 aa7.89□□□□□ -1.15
PTPDC1-201ENST00000288976 RPTNQ6XPR3 784 aa7.89□□□□□ -1.15
PTPDC1-201ENST00000288976 PRSS41Q7RTY9 318 aa7.89□□□□□ -1.15
PTPDC1-201ENST00000288976 OR4K17Q8NGC6 315 aa7.89□□□□□ -1.15
PTPDC1-201ENST00000288976 SLC7A6OSQ96CW6 309 aaPredicted RBP7.89□□□□□ -1.15
PTPDC1-201ENST00000288976 MUC13Q9H3R2 512 aa7.89□□□□□ -1.15
PTPDC1-201ENST00000288976 PTGFRNQ9P2B2 879 aa7.89□□□□□ -1.15
PTPDC1-201ENST00000288976 U3KQV3 271 aa7.89□□□□□ -1.15
PTPDC1-201ENST00000288976 A0A087WV62 115 aa7.89□□□□□ -1.15
PTPDC1-201ENST00000288976 CASC3O15234 703 aaKnown RBP7.89□□□□□ -1.15
PTPDC1-201ENST00000288976 BCAS2O75934 225 aaPredicted RBP7.89□□□□□ -1.15
PTPDC1-201ENST00000288976 DXOO77932 396 aaKnown RBP7.89□□□□□ -1.15
PTPDC1-201ENST00000288976 GBAP04062 536 aa7.89□□□□□ -1.15
PTPDC1-201ENST00000288976 CPMP14384 443 aa7.89□□□□□ -1.15
PTPDC1-201ENST00000288976 MPIP34949 423 aa7.89□□□□□ -1.15
PTPDC1-201ENST00000288976 RAD23AP54725 363 aa7.89□□□□□ -1.15
PTPDC1-201ENST00000288976 OR4F3Q6IEY1 312 aa7.89□□□□□ -1.15
PTPDC1-201ENST00000288976 GALNT10Q86SR1 603 aa7.89□□□□□ -1.15
PTPDC1-201ENST00000288976 PLPP5Q8NEB5 264 aa7.89□□□□□ -1.15
PTPDC1-201ENST00000288976 OR52L1Q8NGH7 329 aa7.89□□□□□ -1.15
PTPDC1-201ENST00000288976 CSF3RQ99062 836 aa7.89□□□□□ -1.15
PTPDC1-201ENST00000288976 GPER1Q99527 375 aa7.89□□□□□ -1.15
PTPDC1-201ENST00000288976 NEK6Q9HC98 313 aa7.89□□□□□ -1.15
PTPDC1-201ENST00000288976 GIN1Q9NXP7 522 aa7.89□□□□□ -1.15
PTPDC1-201ENST00000288976 TAS2R9Q9NYW1 312 aa7.89□□□□□ -1.15
PTPDC1-201ENST00000288976 CROTQ9UKG9 612 aa7.89□□□□□ -1.15
PTPDC1-201ENST00000288976 WASHC1A8K0Z3 465 aa7.89□□□□□ -1.15
PTPDC1-201ENST00000288976 PLOD2O00469 737 aa7.89□□□□□ -1.15
PTPDC1-201ENST00000288976 HYAL3O43820 417 aaPredicted RBP7.89□□□□□ -1.15
PTPDC1-201ENST00000288976 SOX30O94993 753 aa7.89□□□□□ -1.15
PTPDC1-201ENST00000288976 PRG2P13727 222 aa7.89□□□□□ -1.15
PTPDC1-201ENST00000288976 PTPN6P29350 595 aa7.89□□□□□ -1.15
PTPDC1-201ENST00000288976 S100A5P33763 92 aa7.89□□□□□ -1.15
PTPDC1-201ENST00000288976 STT3AP46977 705 aa7.89□□□□□ -1.15
PTPDC1-201ENST00000288976 SLC7A2P52569 658 aa7.89□□□□□ -1.15
PTPDC1-201ENST00000288976 RGS8P57771 180 aaPredicted RBP7.89□□□□□ -1.15
PTPDC1-201ENST00000288976 SNRPNP63162 240 aaKnown RBP7.89□□□□□ -1.15
PTPDC1-201ENST00000288976 PHC1P78364 1004 aa7.89□□□□□ -1.15
PTPDC1-201ENST00000288976 SIM1P81133 766 aaPredicted RBP7.89□□□□□ -1.15
PTPDC1-201ENST00000288976 OVCH1Q7RTY7 1134 aa7.89□□□□□ -1.15
PTPDC1-201ENST00000288976 DGLUCYQ7Z3D6 616 aa7.89□□□□□ -1.15
PTPDC1-201ENST00000288976 RETREG3Q86VR2 466 aa7.89□□□□□ -1.15
PTPDC1-201ENST00000288976 KIAA2013Q8IYS2 634 aa7.89□□□□□ -1.15
PTPDC1-201ENST00000288976 ESX1Q8N693 406 aa7.89□□□□□ -1.15
PTPDC1-201ENST00000288976 ZNF611Q8N823 705 aa7.89□□□□□ -1.15
PTPDC1-201ENST00000288976 OR4A15Q8NGL6 344 aa7.89□□□□□ -1.15
PTPDC1-201ENST00000288976 ANKRD9Q96BM1 317 aaPredicted RBP7.89□□□□□ -1.15
PTPDC1-201ENST00000288976 LRRC58Q96CX6 371 aa7.89□□□□□ -1.15
PTPDC1-201ENST00000288976 AMDHD1Q96NU7 426 aa7.89□□□□□ -1.15
PTPDC1-201ENST00000288976 KCNN2Q9H2S1 579 aa7.89□□□□□ -1.15
PTPDC1-201ENST00000288976 SPAG4Q9NPE6 437 aa7.89□□□□□ -1.15
PTPDC1-201ENST00000288976 SEC14L3Q9UDX4 400 aa7.89□□□□□ -1.15
PTPDC1-201ENST00000288976 NEUROG3Q9Y4Z2 214 aa7.89□□□□□ -1.15
PTPDC1-201ENST00000288976 PKDREJQ9NTG1 2253 aa7.89□□□□□ -1.15
PTPDC1-201ENST00000288976 PTPRBP23467 1997 aa7.89□□□□□ -1.15
PTPDC1-201ENST00000288976 A0A1W2PQ72 361 aa7.89□□□□□ -1.15
PTPDC1-201ENST00000288976 A0A1W2PRB8 838 aa7.89□□□□□ -1.15
PTPDC1-201ENST00000288976 HNRNPRO43390 633 aaKnown RBP7.89□□□□□ -1.15
PTPDC1-201ENST00000288976 PORP16435 677 aaPredicted RBP7.89□□□□□ -1.15
PTPDC1-201ENST00000288976 MC1RQ01726 317 aa7.89□□□□□ -1.15
PTPDC1-201ENST00000288976 MPEG1Q2M385 716 aa7.89□□□□□ -1.15
PTPDC1-201ENST00000288976 C18orf63Q68DL7 685 aa7.89□□□□□ -1.15
PTPDC1-201ENST00000288976 MRPL14Q6P1L8 145 aaKnown RBP7.89□□□□□ -1.15
PTPDC1-201ENST00000288976 TTC33Q6PID6 262 aaPredicted RBP7.89□□□□□ -1.15
PTPDC1-201ENST00000288976 DHRS13Q6UX07 377 aa7.89□□□□□ -1.15
PTPDC1-201ENST00000288976 CYP4Z2PQ8N1L4 340 aa7.89□□□□□ -1.15
PTPDC1-201ENST00000288976 MOSPD2Q8NHP6 518 aa7.89□□□□□ -1.15
PTPDC1-201ENST00000288976 ZNF671Q8TAW3 534 aa7.89□□□□□ -1.15
PTPDC1-201ENST00000288976 PHF10Q8WUB8 498 aaKnown RBP7.89□□□□□ -1.15
PTPDC1-201ENST00000288976 POP5Q969H6 163 aaKnown RBP7.89□□□□□ -1.15
PTPDC1-201ENST00000288976 PRTFDC1Q9NRG1 225 aa7.89□□□□□ -1.15
PTPDC1-201ENST00000288976 THUMPD1Q9NXG2 353 aaKnown RBP7.89□□□□□ -1.15
PTPDC1-201ENST00000288976 TMEM181Q9P2C4 612 aa7.89□□□□□ -1.15
PTPDC1-201ENST00000288976 VCANP13611 3396 aa7.88□□□□□ -1.15
PTPDC1-201ENST00000288976 GLOD5A6NK44 160 aa7.88□□□□□ -1.15
PTPDC1-201ENST00000288976 CNOT3O75175 753 aaKnown RBP7.88□□□□□ -1.15
PTPDC1-201ENST00000288976 APOA1P02647 267 aa7.88□□□□□ -1.15
PTPDC1-201ENST00000288976 YAP1P46937 504 aaKnown RBP7.88□□□□□ -1.15
PTPDC1-201ENST00000288976 PRSS53Q2L4Q9 553 aa7.88□□□□□ -1.15
PTPDC1-201ENST00000288976 NKAIN1Q4KMZ8 207 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms