RNA–Protein interactions for RNA: ENST00000288022.1

PDF-201, Transcript of peptide deformylase, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDF, Length 1,158 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDF-201ENST00000288022 OR7A2PQ8NGA2 310 aa23.11■■□□□ 1.29
PDF-201ENST00000288022 OR52N2Q8NGI0 321 aa23.11■■□□□ 1.29
PDF-201ENST00000288022 SPPL2AQ8TCT8 520 aa23.11■■□□□ 1.29
PDF-201ENST00000288022 SSC4DQ8WTU2 575 aa23.11■■□□□ 1.29
PDF-201ENST00000288022 JSRP1Q96MG2 331 aaPredicted RBP23.11■■□□□ 1.29
PDF-201ENST00000288022 VSTM2LQ96N03 204 aa23.11■■□□□ 1.29
PDF-201ENST00000288022 BTBD9Q96Q07 612 aa23.11■■□□□ 1.29
PDF-201ENST00000288022 DOHHQ9BU89 302 aa23.11■■□□□ 1.29
PDF-201ENST00000288022 DEFB127Q9H1M4 99 aa23.11■■□□□ 1.29
PDF-201ENST00000288022 VIPAS39Q9H9C1 493 aa23.11■■□□□ 1.29
PDF-201ENST00000288022 ATP6V1HQ9UI12 483 aa23.11■■□□□ 1.29
PDF-201ENST00000288022 SH3BGRL2Q9UJC5 107 aa23.11■■□□□ 1.29
PDF-201ENST00000288022 BOKQ9UMX3 212 aaPredicted RBP23.11■■□□□ 1.29
PDF-201ENST00000288022 UPK1AO00322 258 aa23.1■■□□□ 1.29
PDF-201ENST00000288022 SLC19A2O60779 497 aa23.1■■□□□ 1.29
PDF-201ENST00000288022 SNNO75324 88 aaPredicted RBP23.1■■□□□ 1.29
PDF-201ENST00000288022 PDE9AO76083 593 aa23.1■■□□□ 1.29
PDF-201ENST00000288022 ABCB1P08183 1280 aaPredicted RBP23.1■■□□□ 1.29
PDF-201ENST00000288022 G6PDP11413 515 aa23.1■■□□□ 1.29
PDF-201ENST00000288022 ABOP16442 354 aa23.1■■□□□ 1.29
PDF-201ENST00000288022 EFNA1P20827 205 aaPredicted RBP23.1■■□□□ 1.29
PDF-201ENST00000288022 CASP6P55212 293 aa23.1■■□□□ 1.29
PDF-201ENST00000288022 SMU1Q2TAY7 513 aa23.1■■□□□ 1.29
PDF-201ENST00000288022 ZNF800Q2TB10 664 aaPredicted RBP eCLIP23.1■■□□□ 1.29
PDF-201ENST00000288022 CMPK2Q5EBM0 449 aa23.1■■□□□ 1.29
PDF-201ENST00000288022 TBCELQ5QJ74 424 aa23.1■■□□□ 1.29
PDF-201ENST00000288022 SLC44A2Q8IWA5 706 aaPredicted RBP23.1■■□□□ 1.29
PDF-201ENST00000288022 OR2L13Q8N349 312 aa23.1■■□□□ 1.29
PDF-201ENST00000288022 TMBIM1Q969X1 311 aa23.1■■□□□ 1.29
PDF-201ENST00000288022 MARCOQ9UEW3 520 aaPredicted RBP23.1■■□□□ 1.29
PDF-201ENST00000288022 OR10H1Q9Y4A9 318 aa23.1■■□□□ 1.29
PDF-201ENST00000288022 RELNP78509 3460 aa23.09■■□□□ 1.29
PDF-201ENST00000288022 A0A1B0GUH1 482 aa23.09■■□□□ 1.29
PDF-201ENST00000288022 TO15178 435 aa23.09■■□□□ 1.29
PDF-201ENST00000288022 REM1O75628 298 aa23.09■■□□□ 1.29
PDF-201ENST00000288022 GLSO94925 669 aaPredicted RBP23.09■■□□□ 1.29
PDF-201ENST00000288022 KITP10721 976 aa23.09■■□□□ 1.29
PDF-201ENST00000288022 PRPS1L1P21108 318 aa23.09■■□□□ 1.29
PDF-201ENST00000288022 KRT20P35900 424 aa23.09■■□□□ 1.29
PDF-201ENST00000288022 FOXO1Q12778 655 aa23.09■■□□□ 1.29
PDF-201ENST00000288022 CPTPQ5TA50 214 aa23.09■■□□□ 1.29
PDF-201ENST00000288022 BICRALQ6AI39 1079 aa23.09■■□□□ 1.29
PDF-201ENST00000288022 SZRD1Q7Z422 152 aa23.09■■□□□ 1.29
PDF-201ENST00000288022 FJX1Q86VR8 437 aa23.09■■□□□ 1.29
PDF-201ENST00000288022 TMEM251Q8N6I4 163 aa23.09■■□□□ 1.29
PDF-201ENST00000288022 KRTCAP2Q8N6L1 136 aa23.09■■□□□ 1.29
PDF-201ENST00000288022 SECISBP2Q96T21 854 aaKnown RBP23.09■■□□□ 1.29
PDF-201ENST00000288022 PRPF18Q99633 342 aaKnown RBP23.09■■□□□ 1.29
PDF-201ENST00000288022 METTL7AQ9H8H3 244 aa23.09■■□□□ 1.29
PDF-201ENST00000288022 MEAF6Q9HAF1 191 aa23.09■■□□□ 1.29
PDF-201ENST00000288022 ACSS1Q9NUB1 689 aaPredicted RBP23.09■■□□□ 1.29
PDF-201ENST00000288022 ATAD3AQ9NVI7 634 aa23.09■■□□□ 1.29
PDF-201ENST00000288022 ZGRF1Q86YA3 2104 aa23.09■■□□□ 1.29
PDF-201ENST00000288022 ZNHIT1O43257 154 aa23.08■■□□□ 1.29
PDF-201ENST00000288022 CT45A8P0DMV1 189 aa23.08■■□□□ 1.29
PDF-201ENST00000288022 CT45A9P0DMV2 189 aa23.08■■□□□ 1.29
PDF-201ENST00000288022 FRKP42685 505 aaPredicted RBP23.08■■□□□ 1.29
PDF-201ENST00000288022 MAGEA5P43359 124 aa23.08■■□□□ 1.29
PDF-201ENST00000288022 CDK9P50750 372 aaKnown RBP23.08■■□□□ 1.29
PDF-201ENST00000288022 PER3P56645 1201 aa23.08■■□□□ 1.29
PDF-201ENST00000288022 ZNHIT3Q15649 155 aaPredicted RBP23.08■■□□□ 1.29
PDF-201ENST00000288022 CT45A2Q5DJT8 189 aa23.08■■□□□ 1.29
PDF-201ENST00000288022 TMEM198Q66K66 360 aa23.08■■□□□ 1.29
PDF-201ENST00000288022 PAOXQ6QHF9 649 aa23.08■■□□□ 1.29
PDF-201ENST00000288022 NPSR1Q6W5P4 371 aa23.08■■□□□ 1.29
PDF-201ENST00000288022 NUP54Q7Z3B4 507 aa23.08■■□□□ 1.29
PDF-201ENST00000288022 SPPL2CQ8IUH8 684 aa23.08■■□□□ 1.29
PDF-201ENST00000288022 FAM109AQ8N4B1 249 aa23.08■■□□□ 1.29
PDF-201ENST00000288022 RILPQ96NA2 401 aa23.08■■□□□ 1.29
PDF-201ENST00000288022 SH3GL2Q99962 352 aa23.08■■□□□ 1.29
PDF-201ENST00000288022 PROK2Q9HC23 129 aa23.08■■□□□ 1.29
PDF-201ENST00000288022 ZFP64Q9NPA5 681 aa23.08■■□□□ 1.29
PDF-201ENST00000288022 EQTNQ9NQ60 294 aa23.08■■□□□ 1.29
PDF-201ENST00000288022 ASIC5Q9NY37 505 aa23.08■■□□□ 1.29
PDF-201ENST00000288022 EXPH5Q8NEV8 1989 aa23.07■■□□□ 1.28
PDF-201ENST00000288022 FLNCQ14315 2725 aa23.07■■□□□ 1.28
PDF-201ENST00000288022 A0A1B0GTH9 108 aa23.07■■□□□ 1.28
PDF-201ENST00000288022 ANKRD33BA6NCL7 494 aa23.07■■□□□ 1.28
PDF-201ENST00000288022 IFI6P09912 130 aa23.07■■□□□ 1.28
PDF-201ENST00000288022 LAMP1P11279 417 aa23.07■■□□□ 1.28
PDF-201ENST00000288022 LBPP18428 481 aa23.07■■□□□ 1.28
PDF-201ENST00000288022 IL12BP29460 328 aa23.07■■□□□ 1.28
PDF-201ENST00000288022 MASP1P48740 699 aa23.07■■□□□ 1.28
PDF-201ENST00000288022 PRKAG1P54619 331 aa23.07■■□□□ 1.28
PDF-201ENST00000288022 DESI1Q6ICB0 168 aa23.07■■□□□ 1.28
PDF-201ENST00000288022 WDR53Q7Z5U6 358 aaPredicted RBP23.07■■□□□ 1.28
PDF-201ENST00000288022 ZNF75CPQ92670 426 aaPredicted RBP23.07■■□□□ 1.28
PDF-201ENST00000288022 HGDQ93099 445 aa23.07■■□□□ 1.28
PDF-201ENST00000288022 ZNF597Q96LX8 424 aa23.07■■□□□ 1.28
PDF-201ENST00000288022 COL21A1Q96P44 957 aa23.07■■□□□ 1.28
PDF-201ENST00000288022 A0A1W2PRB8 838 aa23.06■■□□□ 1.28
PDF-201ENST00000288022 TRPC5OSA6NMA1 111 aa23.06■■□□□ 1.28
PDF-201ENST00000288022 HMGB1P1B2RPK0 211 aaPredicted RBP23.06■■□□□ 1.28
PDF-201ENST00000288022 HDAC3O15379 428 aa23.06■■□□□ 1.28
PDF-201ENST00000288022 UGT2B11O75310 529 aa23.06■■□□□ 1.28
PDF-201ENST00000288022 CASP3P42574 277 aa23.06■■□□□ 1.28
PDF-201ENST00000288022 CA7P43166 264 aa23.06■■□□□ 1.28
PDF-201ENST00000288022 DIO3P55073 304 aa23.06■■□□□ 1.28
PDF-201ENST00000288022 PSPHP78330 225 aa23.06■■□□□ 1.28
PDF-201ENST00000288022 PSG6Q00889 435 aa23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms