RNA–Protein interactions for RNA: ENST00000287766.8

SLC6A1-201, Transcript of solute carrier family 6 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A1, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-201ENST00000287766 PYCR3Q53H96 274 aa11.92□□□□□ -0.5
SLC6A1-201ENST00000287766 PXDC1Q5TGL8 231 aa11.92□□□□□ -0.5
SLC6A1-201ENST00000287766 ZNF691Q5VV52 312 aa11.92□□□□□ -0.5
SLC6A1-201ENST00000287766 CD300LGQ6UXG3 332 aa11.92□□□□□ -0.5
SLC6A1-201ENST00000287766 GJD3Q8N144 294 aa11.92□□□□□ -0.5
SLC6A1-201ENST00000287766 CELF5Q8N6W0 485 aaKnown RBP11.92□□□□□ -0.5
SLC6A1-201ENST00000287766 ATP6V1C2Q8NEY4 427 aa11.92□□□□□ -0.5
SLC6A1-201ENST00000287766 OR6Q1Q8NGQ2 317 aa11.92□□□□□ -0.5
SLC6A1-201ENST00000287766 PDLIM5Q96HC4 596 aaKnown RBP11.92□□□□□ -0.5
SLC6A1-201ENST00000287766 RHNO1Q9BSD3 238 aa11.92□□□□□ -0.5
SLC6A1-201ENST00000287766 OR1A2Q9Y585 309 aa11.92□□□□□ -0.5
SLC6A1-201ENST00000287766 CAPN5O15484 640 aaPredicted RBP11.92□□□□□ -0.5
SLC6A1-201ENST00000287766 TXNL1O43396 289 aa11.92□□□□□ -0.5
SLC6A1-201ENST00000287766 ITGA10O75578 1167 aa11.92□□□□□ -0.5
SLC6A1-201ENST00000287766 TSPAN12O95859 305 aa11.92□□□□□ -0.5
SLC6A1-201ENST00000287766 PAHP00439 452 aa11.92□□□□□ -0.5
SLC6A1-201ENST00000287766 ACPPP15309 386 aa11.92□□□□□ -0.5
SLC6A1-201ENST00000287766 CR2P20023 1033 aa11.92□□□□□ -0.5
SLC6A1-201ENST00000287766 PTPN6P29350 595 aa11.92□□□□□ -0.5
SLC6A1-201ENST00000287766 ACTR1BP42025 376 aa11.92□□□□□ -0.5
SLC6A1-201ENST00000287766 CRISP1P54107 249 aa11.92□□□□□ -0.5
SLC6A1-201ENST00000287766 ACTR1AP61163 376 aa11.92□□□□□ -0.5
SLC6A1-201ENST00000287766 ADARB1P78563 741 aaKnown RBP11.92□□□□□ -0.5
SLC6A1-201ENST00000287766 TMEM19Q96HH6 336 aa11.92□□□□□ -0.5
SLC6A1-201ENST00000287766 NECTIN4Q96NY8 510 aa11.92□□□□□ -0.5
SLC6A1-201ENST00000287766 ZNF649Q9BS31 505 aa11.92□□□□□ -0.5
SLC6A1-201ENST00000287766 OR10A4Q9H209 315 aa11.92□□□□□ -0.5
SLC6A1-201ENST00000287766 NTN4Q9HB63 628 aa11.92□□□□□ -0.5
SLC6A1-201ENST00000287766 A0A1B0GVC2 190 aa11.92□□□□□ -0.5
SLC6A1-201ENST00000287766 A6NIN4 97 aa11.92□□□□□ -0.5
SLC6A1-201ENST00000287766 M0R3H8 397 aa11.92□□□□□ -0.5
SLC6A1-201ENST00000287766 FLRT2O43155 660 aa11.92□□□□□ -0.5
SLC6A1-201ENST00000287766 SGCEO43556 437 aa11.92□□□□□ -0.5
SLC6A1-201ENST00000287766 C1SP09871 688 aa11.92□□□□□ -0.5
SLC6A1-201ENST00000287766 C6P13671 934 aa11.92□□□□□ -0.5
SLC6A1-201ENST00000287766 CSNK2A2P19784 350 aaPredicted RBP11.92□□□□□ -0.5
SLC6A1-201ENST00000287766 KCNC4Q03721 635 aa11.92□□□□□ -0.5
SLC6A1-201ENST00000287766 CTU2Q2VPK5 515 aaKnown RBP11.92□□□□□ -0.5
SLC6A1-201ENST00000287766 GFOD2Q3B7J2 385 aa11.92□□□□□ -0.5
SLC6A1-201ENST00000287766 CADM3Q8N126 398 aa11.92□□□□□ -0.5
SLC6A1-201ENST00000287766 PAPD5Q8NDF8 572 aaKnown RBP11.92□□□□□ -0.5
SLC6A1-201ENST00000287766 SECISBP2Q96T21 854 aaKnown RBP11.92□□□□□ -0.5
SLC6A1-201ENST00000287766 PKMYT1Q99640 499 aa11.92□□□□□ -0.5
SLC6A1-201ENST00000287766 BTBD1Q9H0C5 482 aa11.92□□□□□ -0.5
SLC6A1-201ENST00000287766 ASPDHA6ND91 283 aa11.91□□□□□ -0.5
SLC6A1-201ENST00000287766 ALPPP05187 535 aa11.91□□□□□ -0.5
SLC6A1-201ENST00000287766 ZNF35P13682 527 aa11.91□□□□□ -0.5
SLC6A1-201ENST00000287766 EPCAMP16422 314 aa11.91□□□□□ -0.5
SLC6A1-201ENST00000287766 TGFBR1P36897 503 aa11.91□□□□□ -0.5
SLC6A1-201ENST00000287766 CASP3P42574 277 aa11.91□□□□□ -0.5
SLC6A1-201ENST00000287766 DSG2Q14126 1118 aa11.91□□□□□ -0.5
SLC6A1-201ENST00000287766 TCEAL8Q8IYN2 117 aa11.91□□□□□ -0.5
SLC6A1-201ENST00000287766 GRHL3Q8TE85 626 aa11.91□□□□□ -0.5
SLC6A1-201ENST00000287766 TTLL2Q9BWV7 592 aa11.91□□□□□ -0.5
SLC6A1-201ENST00000287766 LGR4Q9BXB1 951 aa11.91□□□□□ -0.5
SLC6A1-201ENST00000287766 OR51I1Q9H343 314 aa11.91□□□□□ -0.5
SLC6A1-201ENST00000287766 PRMT8Q9NR22 394 aaPredicted RBP11.91□□□□□ -0.5
SLC6A1-201ENST00000287766 PPT2Q9UMR5 302 aa11.91□□□□□ -0.5
SLC6A1-201ENST00000287766 B3GNT3Q9Y2A9 372 aa11.91□□□□□ -0.5
SLC6A1-201ENST00000287766 RPH3AQ9Y2J0 694 aaPredicted RBP11.91□□□□□ -0.5
SLC6A1-201ENST00000287766 F8W036 122 aa11.91□□□□□ -0.5
SLC6A1-201ENST00000287766 SOX3P41225 446 aa11.91□□□□□ -0.5
SLC6A1-201ENST00000287766 SELENOWP63302 87 aa11.91□□□□□ -0.5
SLC6A1-201ENST00000287766 BLOC1S1P78537 153 aa11.91□□□□□ -0.5
SLC6A1-201ENST00000287766 SLC5A12Q1EHB4 618 aa11.91□□□□□ -0.5
SLC6A1-201ENST00000287766 EIF2S3LQ2VIR3 472 aaKnown RBP11.91□□□□□ -0.5
SLC6A1-201ENST00000287766 TMEM179BQ7Z7N9 219 aa11.91□□□□□ -0.5
SLC6A1-201ENST00000287766 DCUN1D3Q8IWE4 304 aa11.91□□□□□ -0.5
SLC6A1-201ENST00000287766 YIPF7Q8N8F6 280 aa11.91□□□□□ -0.5
SLC6A1-201ENST00000287766 RASGEF1AQ8N9B8 481 aa11.91□□□□□ -0.5
SLC6A1-201ENST00000287766 BEST4Q8NFU0 473 aa11.91□□□□□ -0.5
SLC6A1-201ENST00000287766 ZNF480Q8WV37 535 aa11.91□□□□□ -0.5
SLC6A1-201ENST00000287766 COQ8BQ96D53 544 aa11.91□□□□□ -0.5
SLC6A1-201ENST00000287766 P2RY12Q9H244 342 aa11.91□□□□□ -0.5
SLC6A1-201ENST00000287766 BRWD3Q6RI45 1802 aa11.91□□□□□ -0.5
SLC6A1-201ENST00000287766 IGLON5A6NGN9 336 aa11.91□□□□□ -0.5
SLC6A1-201ENST00000287766 STMND1H3BQB6 276 aa11.91□□□□□ -0.5
SLC6A1-201ENST00000287766 RFPL3O75679 317 aa11.91□□□□□ -0.5
SLC6A1-201ENST00000287766 RAB36O95755 333 aa11.91□□□□□ -0.5
SLC6A1-201ENST00000287766 APODP05090 189 aa11.91□□□□□ -0.5
SLC6A1-201ENST00000287766 BMP4P12644 408 aa11.91□□□□□ -0.5
SLC6A1-201ENST00000287766 TUBG1P23258 451 aa11.91□□□□□ -0.5
SLC6A1-201ENST00000287766 AHCYP23526 432 aa11.91□□□□□ -0.5
SLC6A1-201ENST00000287766 EPHA2P29317 976 aa11.91□□□□□ -0.5
SLC6A1-201ENST00000287766 CMPK1P30085 196 aa11.91□□□□□ -0.5
SLC6A1-201ENST00000287766 KHKP50053 298 aa11.91□□□□□ -0.5
SLC6A1-201ENST00000287766 PROX2Q3B8N5 592 aa11.91□□□□□ -0.5
SLC6A1-201ENST00000287766 PYHIN1Q6K0P9 492 aa11.91□□□□□ -0.5
SLC6A1-201ENST00000287766 NXPE4Q6UWF7 544 aa11.91□□□□□ -0.5
SLC6A1-201ENST00000287766 FAM198BQ6UWH4 519 aa11.91□□□□□ -0.5
SLC6A1-201ENST00000287766 OLIG3Q7RTU3 272 aa11.91□□□□□ -0.5
SLC6A1-201ENST00000287766 RANBP3LQ86VV4 465 aaPredicted RBP11.91□□□□□ -0.5
SLC6A1-201ENST00000287766 CBARPQ8N350 705 aaPredicted RBP11.91□□□□□ -0.5
SLC6A1-201ENST00000287766 JAGN1Q8N5M9 183 aa11.91□□□□□ -0.5
SLC6A1-201ENST00000287766 OR5D16Q8NGK9 328 aa11.91□□□□□ -0.5
SLC6A1-201ENST00000287766 MFSD8Q8NHS3 518 aa11.91□□□□□ -0.5
SLC6A1-201ENST00000287766 C5orf34Q96MH7 638 aa11.91□□□□□ -0.5
SLC6A1-201ENST00000287766 RDH14Q9HBH5 336 aa11.91□□□□□ -0.5
SLC6A1-201ENST00000287766 SPAG17Q6Q759 2223 aa11.91□□□□□ -0.5
SLC6A1-201ENST00000287766 TPRP12270 2363 aaKnown RBP11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms