RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 MUC22E2RYF6 1773 aaPredicted RBP9.79□□□□□ -0.84
SKA1-201ENST00000285116 SGK494L7N484 410 aa9.79□□□□□ -0.84
SKA1-201ENST00000285116 FABP7O15540 132 aa9.79□□□□□ -0.84
SKA1-201ENST00000285116 LEFTY1O75610 366 aa9.79□□□□□ -0.84
SKA1-201ENST00000285116 KLK1P06870 262 aa9.79□□□□□ -0.84
SKA1-201ENST00000285116 LAG3P18627 525 aa9.79□□□□□ -0.84
SKA1-201ENST00000285116 ACADLP28330 430 aa9.79□□□□□ -0.84
SKA1-201ENST00000285116 PDHA2P29803 388 aa9.79□□□□□ -0.84
SKA1-201ENST00000285116 INPP1P49441 399 aa9.79□□□□□ -0.84
SKA1-201ENST00000285116 BTG1P62324 171 aa9.79□□□□□ -0.84
SKA1-201ENST00000285116 RIPPLY1Q0D2K3 151 aa9.79□□□□□ -0.84
SKA1-201ENST00000285116 PLK5Q496M5 336 aa9.79□□□□□ -0.84
SKA1-201ENST00000285116 KLHL22Q53GT1 634 aa9.79□□□□□ -0.84
SKA1-201ENST00000285116 CNIH2Q6PI25 160 aa9.79□□□□□ -0.84
SKA1-201ENST00000285116 TMEM65Q6PI78 240 aa9.79□□□□□ -0.84
SKA1-201ENST00000285116 TMEM220Q6QAJ8 160 aa9.79□□□□□ -0.84
SKA1-201ENST00000285116 KRT78Q8N1N4 520 aa9.79□□□□□ -0.84
SKA1-201ENST00000285116 HORMAD2Q8N7B1 307 aa9.79□□□□□ -0.84
SKA1-201ENST00000285116 TMEM163Q8TC26 289 aa9.79□□□□□ -0.84
SKA1-201ENST00000285116 ZNF431Q8TF32 576 aaPredicted RBP9.79□□□□□ -0.84
SKA1-201ENST00000285116 ZNF607Q96SK3 696 aa9.79□□□□□ -0.84
SKA1-201ENST00000285116 RANBP3Q9H6Z4 567 aaPredicted RBP9.79□□□□□ -0.84
SKA1-201ENST00000285116 DNAJC27Q9NZQ0 273 aa9.79□□□□□ -0.84
SKA1-201ENST00000285116 CDH10Q9Y6N8 788 aa9.79□□□□□ -0.84
SKA1-201ENST00000285116 C5orf58C9J3I9 102 aa9.79□□□□□ -0.84
SKA1-201ENST00000285116 GNRH1P01148 92 aa9.79□□□□□ -0.84
SKA1-201ENST00000285116 RAF1P04049 648 aa9.79□□□□□ -0.84
SKA1-201ENST00000285116 TPOP07202 933 aa9.79□□□□□ -0.84
SKA1-201ENST00000285116 GJA1P17302 382 aa9.79□□□□□ -0.84
SKA1-201ENST00000285116 SRP54P61011 504 aaKnown RBP9.79□□□□□ -0.84
SKA1-201ENST00000285116 TRA2BP62995 288 aaKnown RBP9.79□□□□□ -0.84
SKA1-201ENST00000285116 COL28A1Q2UY09 1125 aa9.79□□□□□ -0.84
SKA1-201ENST00000285116 PRAMEF8Q5VWM4 474 aa9.79□□□□□ -0.84
SKA1-201ENST00000285116 PRAMEF7Q5VXH5 474 aa9.79□□□□□ -0.84
SKA1-201ENST00000285116 USP30Q70CQ3 517 aa9.79□□□□□ -0.84
SKA1-201ENST00000285116 PDZD3Q86UT5 571 aa9.79□□□□□ -0.84
SKA1-201ENST00000285116 LILRA3Q8N6C8 439 aaPredicted RBP9.79□□□□□ -0.84
SKA1-201ENST00000285116 OR52I1Q8NGK6 324 aa9.79□□□□□ -0.84
SKA1-201ENST00000285116 DTD2Q96FN9 168 aa9.79□□□□□ -0.84
SKA1-201ENST00000285116 MSANTD3Q96H12 275 aa9.79□□□□□ -0.84
SKA1-201ENST00000285116 TMEM19Q96HH6 336 aa9.79□□□□□ -0.84
SKA1-201ENST00000285116 RSPO3Q9BXY4 272 aaPredicted RBP9.79□□□□□ -0.84
SKA1-201ENST00000285116 POLR2J3Q9H1A7 115 aaKnown RBP9.79□□□□□ -0.84
SKA1-201ENST00000285116 OR51B5Q9H339 312 aa9.79□□□□□ -0.84
SKA1-201ENST00000285116 BCL2L10Q9HD36 194 aa9.79□□□□□ -0.84
SKA1-201ENST00000285116 C11orf16Q9NQ32 467 aa9.79□□□□□ -0.84
SKA1-201ENST00000285116 MIEF1Q9NQG6 463 aa9.79□□□□□ -0.84
SKA1-201ENST00000285116 SIRT3Q9NTG7 399 aaPredicted RBP9.79□□□□□ -0.84
SKA1-201ENST00000285116 PTTG3PQ9NZH4 202 aa9.79□□□□□ -0.84
SKA1-201ENST00000285116 IL36AQ9UHA7 158 aa9.79□□□□□ -0.84
SKA1-201ENST00000285116 A4GNTQ9UNA3 340 aa9.79□□□□□ -0.84
SKA1-201ENST00000285116 GPR34Q9UPC5 381 aa9.79□□□□□ -0.84
SKA1-201ENST00000285116 SF3B6Q9Y3B4 125 aaKnown RBP9.79□□□□□ -0.84
SKA1-201ENST00000285116 PLOD3O60568 738 aa9.78□□□□□ -0.84
SKA1-201ENST00000285116 MTRF1O75570 445 aaKnown RBP9.78□□□□□ -0.84
SKA1-201ENST00000285116 FGF19O95750 216 aa9.78□□□□□ -0.84
SKA1-201ENST00000285116 SOD1P00441 154 aa9.78□□□□□ -0.84
SKA1-201ENST00000285116 TGFB1P01137 390 aa9.78□□□□□ -0.84
SKA1-201ENST00000285116 ZNF250P15622 560 aa9.78□□□□□ -0.84
SKA1-201ENST00000285116 ATF4P18848 351 aaPredicted RBP9.78□□□□□ -0.84
SKA1-201ENST00000285116 HK1P19367 917 aa9.78□□□□□ -0.84
SKA1-201ENST00000285116 GSTM3P21266 225 aa9.78□□□□□ -0.84
SKA1-201ENST00000285116 GALP22466 123 aa9.78□□□□□ -0.84
SKA1-201ENST00000285116 SOAT1P35610 550 aa9.78□□□□□ -0.84
SKA1-201ENST00000285116 OPRD1P41143 372 aa9.78□□□□□ -0.84
SKA1-201ENST00000285116 UBE3AQ05086 875 aa9.78□□□□□ -0.84
SKA1-201ENST00000285116 ACSM1Q08AH1 577 aa9.78□□□□□ -0.84
SKA1-201ENST00000285116 RAB40BQ12829 278 aa9.78□□□□□ -0.84
SKA1-201ENST00000285116 MADCAM1Q13477 382 aa9.78□□□□□ -0.84
SKA1-201ENST00000285116 ARHGAP19Q14CB8 494 aa9.78□□□□□ -0.84
SKA1-201ENST00000285116 KLHL12Q53G59 568 aa9.78□□□□□ -0.84
SKA1-201ENST00000285116 LRRC73Q5JTD7 316 aa9.78□□□□□ -0.84
SKA1-201ENST00000285116 C1orf94Q6P1W5 598 aa9.78□□□□□ -0.84
SKA1-201ENST00000285116 TMIGD1Q6UXZ0 262 aa9.78□□□□□ -0.84
SKA1-201ENST00000285116 QSOX2Q6ZRP7 698 aa9.78□□□□□ -0.84
SKA1-201ENST00000285116 CDH24Q86UP0 819 aa9.78□□□□□ -0.84
SKA1-201ENST00000285116 LAPTM4BQ86VI4 370 aa9.78□□□□□ -0.84
SKA1-201ENST00000285116 GPALPP1Q8IXQ4 340 aa9.78□□□□□ -0.84
SKA1-201ENST00000285116 GALNT11Q8NCW6 608 aa9.78□□□□□ -0.84
SKA1-201ENST00000285116 OR5AK3PQ8NH89 298 aa9.78□□□□□ -0.84
SKA1-201ENST00000285116 FOXJ1Q92949 421 aa9.78□□□□□ -0.84
SKA1-201ENST00000285116 JAM3Q9BX67 310 aa9.78□□□□□ -0.84
SKA1-201ENST00000285116 SLC46A2Q9BY10 475 aa9.78□□□□□ -0.84
SKA1-201ENST00000285116 B3GAT2Q9NPZ5 323 aa9.78□□□□□ -0.84
SKA1-201ENST00000285116 WASH6PQ9NQA3 447 aa9.78□□□□□ -0.84
SKA1-201ENST00000285116 SAGE1Q9NXZ1 904 aa9.78□□□□□ -0.84
SKA1-201ENST00000285116 COMMD3Q9UBI1 195 aa9.78□□□□□ -0.84
SKA1-201ENST00000285116 GSTK1Q9Y2Q3 226 aa9.78□□□□□ -0.84
SKA1-201ENST00000285116 PLXND1Q9Y4D7 1925 aa9.78□□□□□ -0.84
SKA1-201ENST00000285116 LOC102723532A0A0G2JNH3 316 aa9.78□□□□□ -0.84
SKA1-201ENST00000285116 HMGN4O00479 90 aa9.78□□□□□ -0.84
SKA1-201ENST00000285116 KIAA0355O15063 1070 aa9.78□□□□□ -0.84
SKA1-201ENST00000285116 SOX9P48436 509 aa9.78□□□□□ -0.84
SKA1-201ENST00000285116 NUBP1P53384 320 aa9.78□□□□□ -0.84
SKA1-201ENST00000285116 EPHA5P54756 1037 aa9.78□□□□□ -0.84
SKA1-201ENST00000285116 DPTQ07507 201 aa9.78□□□□□ -0.84
SKA1-201ENST00000285116 CNTN1Q12860 1018 aa9.78□□□□□ -0.84
SKA1-201ENST00000285116 BAMBIQ13145 260 aa9.78□□□□□ -0.84
SKA1-201ENST00000285116 RPA4Q13156 261 aa9.78□□□□□ -0.84
SKA1-201ENST00000285116 IL18Q14116 193 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms