RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 IQCHQ86VS3 1027 aa16.81■□□□□ 0.28
CAPN1-201ENST00000279247 FAR1Q8WVX9 515 aa16.81■□□□□ 0.28
CAPN1-201ENST00000279247 ZNF764Q96H86 408 aaPredicted RBP16.81■□□□□ 0.28
CAPN1-201ENST00000279247 SLC38A3Q99624 504 aa16.81■□□□□ 0.28
CAPN1-201ENST00000279247 SLC22A7Q9Y694 548 aa16.81■□□□□ 0.28
CAPN1-201ENST00000279247 BDP1A6H8Y1 2624 aa16.81■□□□□ 0.28
CAPN1-201ENST00000279247 SEC14L2O76054 403 aa16.81■□□□□ 0.28
CAPN1-201ENST00000279247 ZIC2O95409 532 aaPredicted RBP16.81■□□□□ 0.28
CAPN1-201ENST00000279247 ALPPP05187 535 aa16.81■□□□□ 0.28
CAPN1-201ENST00000279247 ZNF10P21506 573 aaPredicted RBP16.81■□□□□ 0.28
CAPN1-201ENST00000279247 CBLP22681 906 aa16.81■□□□□ 0.28
CAPN1-201ENST00000279247 DCKP27707 260 aa16.81■□□□□ 0.28
CAPN1-201ENST00000279247 ANXA11P50995 505 aaKnown RBP16.81■□□□□ 0.28
CAPN1-201ENST00000279247 PODNL1Q6PEZ8 512 aa16.81■□□□□ 0.28
CAPN1-201ENST00000279247 CLIP4Q8N3C7 705 aa16.81■□□□□ 0.28
CAPN1-201ENST00000279247 ARL14Q8N4G2 192 aa16.81■□□□□ 0.28
CAPN1-201ENST00000279247 ZNF614Q8N883 585 aa16.81■□□□□ 0.28
CAPN1-201ENST00000279247 TGM7Q96PF1 710 aa16.81■□□□□ 0.28
CAPN1-201ENST00000279247 ACTRT3Q9BYD9 372 aa16.81■□□□□ 0.28
CAPN1-201ENST00000279247 SOHLH2Q9NX45 425 aa16.81■□□□□ 0.28
CAPN1-201ENST00000279247 A4GNTQ9UNA3 340 aa16.81■□□□□ 0.28
CAPN1-201ENST00000279247 RP1P56715 2156 aa16.81■□□□□ 0.28
CAPN1-201ENST00000279247 CENPVL1A0A0U1RR11 272 aa16.8■□□□□ 0.28
CAPN1-201ENST00000279247 OR5K4A6NMS3 321 aa16.8■□□□□ 0.28
CAPN1-201ENST00000279247 ZNF99A8MXY4 864 aaPredicted RBP16.8■□□□□ 0.28
CAPN1-201ENST00000279247 DPM1O60762 260 aa16.8■□□□□ 0.28
CAPN1-201ENST00000279247 UBXN7O94888 489 aa16.8■□□□□ 0.28
CAPN1-201ENST00000279247 PORP16435 677 aaPredicted RBP16.8■□□□□ 0.28
CAPN1-201ENST00000279247 PCMT1P22061 227 aa16.8■□□□□ 0.28
CAPN1-201ENST00000279247 LIMS1P48059 325 aa16.8■□□□□ 0.28
CAPN1-201ENST00000279247 GFERP55789 205 aa16.8■□□□□ 0.28
CAPN1-201ENST00000279247 DUSP5Q16690 384 aa16.8■□□□□ 0.28
CAPN1-201ENST00000279247 SNAP47Q5SQN1 464 aa16.8■□□□□ 0.28
CAPN1-201ENST00000279247 GTF2IRD2BQ6EKJ0 949 aa16.8■□□□□ 0.28
CAPN1-201ENST00000279247 FIGNL1Q6PIW4 674 aa16.8■□□□□ 0.28
CAPN1-201ENST00000279247 GTF2IRD2Q86UP8 949 aa16.8■□□□□ 0.28
CAPN1-201ENST00000279247 BBS10Q8TAM1 723 aa16.8■□□□□ 0.28
CAPN1-201ENST00000279247 ZFAND2BQ8WV99 257 aa16.8■□□□□ 0.28
CAPN1-201ENST00000279247 PITX2Q99697 317 aa16.8■□□□□ 0.28
CAPN1-201ENST00000279247 POLR2J3Q9H1A7 115 aaKnown RBP16.8■□□□□ 0.28
CAPN1-201ENST00000279247 ZNF226Q9NYT6 803 aa16.8■□□□□ 0.28
CAPN1-201ENST00000279247 ENTPD2Q9Y5L3 495 aa16.8■□□□□ 0.28
CAPN1-201ENST00000279247 ZNF217O75362 1048 aa16.8■□□□□ 0.28
CAPN1-201ENST00000279247 TTKP33981 857 aa16.8■□□□□ 0.28
CAPN1-201ENST00000279247 TAS2R41P59536 307 aa16.8■□□□□ 0.28
CAPN1-201ENST00000279247 MFSD12Q6NUT3 480 aa16.8■□□□□ 0.28
CAPN1-201ENST00000279247 PTCHD4Q6ZW05 846 aa16.8■□□□□ 0.28
CAPN1-201ENST00000279247 RASSF5Q8WWW0 418 aa16.8■□□□□ 0.28
CAPN1-201ENST00000279247 NECAB3Q96P71 396 aaPredicted RBP16.8■□□□□ 0.28
CAPN1-201ENST00000279247 FBXO34Q9NWN3 711 aa16.8■□□□□ 0.28
CAPN1-201ENST00000279247 MUTYHQ9UIF7 546 aa16.8■□□□□ 0.28
CAPN1-201ENST00000279247 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.8■□□□□ 0.28
CAPN1-201ENST00000279247 IGLV3-19P01714 112 aa16.8■□□□□ 0.28
CAPN1-201ENST00000279247 STSP08842 583 aa16.8■□□□□ 0.28
CAPN1-201ENST00000279247 CCNA2P20248 432 aa16.8■□□□□ 0.28
CAPN1-201ENST00000279247 FAM214AQ32MH5 1076 aa16.8■□□□□ 0.28
CAPN1-201ENST00000279247 ZNF655Q8N720 491 aaPredicted RBP16.8■□□□□ 0.28
CAPN1-201ENST00000279247 SFXN5Q8TD22 340 aa16.8■□□□□ 0.28
CAPN1-201ENST00000279247 FBLIM1Q8WUP2 373 aa16.8■□□□□ 0.28
CAPN1-201ENST00000279247 GIMAP5Q96F15 307 aa16.8■□□□□ 0.28
CAPN1-201ENST00000279247 PEX11GQ96HA9 241 aa16.8■□□□□ 0.28
CAPN1-201ENST00000279247 DUSP21Q9H596 190 aa16.8■□□□□ 0.28
CAPN1-201ENST00000279247 OCEL1Q9H607 264 aa16.8■□□□□ 0.28
CAPN1-201ENST00000279247 UCKL1Q9NWZ5 548 aa16.8■□□□□ 0.28
CAPN1-201ENST00000279247 MS4A12Q9NXJ0 267 aa16.8■□□□□ 0.28
CAPN1-201ENST00000279247 SPACA6W5XKT8 324 aa16.8■□□□□ 0.28
CAPN1-201ENST00000279247 TTC28Q96AY4 2481 aa16.79■□□□□ 0.28
CAPN1-201ENST00000279247 A8MVJ9 347 aa16.79■□□□□ 0.28
CAPN1-201ENST00000279247 PDGFBP01127 241 aaPredicted RBP16.79■□□□□ 0.28
CAPN1-201ENST00000279247 SMIM10L1P0DMW3 83 aa16.79■□□□□ 0.28
CAPN1-201ENST00000279247 CRISP1P54107 249 aa16.79■□□□□ 0.28
CAPN1-201ENST00000279247 NUP107P57740 925 aa16.79■□□□□ 0.28
CAPN1-201ENST00000279247 ZP2Q05996 745 aa16.79■□□□□ 0.28
CAPN1-201ENST00000279247 NNATQ16517 81 aa16.79■□□□□ 0.28
CAPN1-201ENST00000279247 OR4K5Q8NGD3 323 aa16.79■□□□□ 0.28
CAPN1-201ENST00000279247 SMIM10Q96HG1 83 aa16.79■□□□□ 0.28
CAPN1-201ENST00000279247 KCND3Q9UK17 655 aa16.79■□□□□ 0.28
CAPN1-201ENST00000279247 CT62P0C5K7 136 aa16.79■□□□□ 0.28
CAPN1-201ENST00000279247 HSMCR30P0CW71 290 aa16.79■□□□□ 0.28
CAPN1-201ENST00000279247 TGFBR1P36897 503 aa16.79■□□□□ 0.28
CAPN1-201ENST00000279247 HMGA2P52926 109 aa16.79■□□□□ 0.28
CAPN1-201ENST00000279247 UGT2B15P54855 530 aa16.79■□□□□ 0.28
CAPN1-201ENST00000279247 ALDH6A1Q02252 535 aaKnown RBP16.79■□□□□ 0.28
CAPN1-201ENST00000279247 TSSK4Q6SA08 328 aa16.79■□□□□ 0.28
CAPN1-201ENST00000279247 OR52P1PQ8NH57 321 aa16.79■□□□□ 0.28
CAPN1-201ENST00000279247 MUL1Q969V5 352 aa16.79■□□□□ 0.28
CAPN1-201ENST00000279247 SPATA5L1Q9BVQ7 753 aa16.79■□□□□ 0.28
CAPN1-201ENST00000279247 UCK2Q9BZX2 261 aa16.79■□□□□ 0.28
CAPN1-201ENST00000279247 DNAJC27Q9NZQ0 273 aa16.79■□□□□ 0.28
CAPN1-201ENST00000279247 WDR45Q9Y484 360 aa16.79■□□□□ 0.28
CAPN1-201ENST00000279247 ZSCAN9O15535 394 aaPredicted RBP16.78■□□□□ 0.28
CAPN1-201ENST00000279247 GALR3O60755 368 aaPredicted RBP16.78■□□□□ 0.28
CAPN1-201ENST00000279247 SEPHS1P49903 392 aa16.78■□□□□ 0.28
CAPN1-201ENST00000279247 CDC42P60953 191 aa16.78■□□□□ 0.28
CAPN1-201ENST00000279247 SLC13A2Q13183 592 aa16.78■□□□□ 0.28
CAPN1-201ENST00000279247 DGAT2L6Q6ZPD8 337 aa16.78■□□□□ 0.28
CAPN1-201ENST00000279247 MCATQ8IVS2 390 aaKnown RBP16.78■□□□□ 0.28
CAPN1-201ENST00000279247 ZNF687Q8N1G0 1237 aa16.78■□□□□ 0.28
CAPN1-201ENST00000279247 C19orf47Q8N9M1 422 aaKnown RBP16.78■□□□□ 0.28
CAPN1-201ENST00000279247 GPR151Q8TDV0 419 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms