RNA–Protein interactions for RNA: ENST00000274030.10

USP53-201, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP53, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-201ENST00000274030 SNTB2Q13425 540 aaKnown RBP10.89□□□□□ -0.67
USP53-201ENST00000274030 C6orf132Q5T0Z8 1188 aa10.89□□□□□ -0.67
USP53-201ENST00000274030 DNAAF1Q8NEP3 725 aa10.89□□□□□ -0.67
USP53-201ENST00000274030 OR5D16Q8NGK9 328 aa10.89□□□□□ -0.67
USP53-201ENST00000274030 OR9A2Q8NGT5 310 aa10.89□□□□□ -0.67
USP53-201ENST00000274030 SAMD8Q96LT4 415 aa10.89□□□□□ -0.67
USP53-201ENST00000274030 DPH1Q9BZG8 443 aa10.89□□□□□ -0.67
USP53-201ENST00000274030 ZNF442Q9H7R0 627 aa10.89□□□□□ -0.67
USP53-201ENST00000274030 POT1Q9NUX5 634 aa10.89□□□□□ -0.67
USP53-201ENST00000274030 FMN2Q9NZ56 1722 aa10.89□□□□□ -0.67
USP53-201ENST00000274030 KIAA0355O15063 1070 aa10.89□□□□□ -0.67
USP53-201ENST00000274030 PPP1R3DO95685 299 aa10.89□□□□□ -0.67
USP53-201ENST00000274030 HPRP00739 348 aa10.89□□□□□ -0.67
USP53-201ENST00000274030 MC3RP41968 323 aa10.89□□□□□ -0.67
USP53-201ENST00000274030 CDKN2CP42773 168 aa10.89□□□□□ -0.67
USP53-201ENST00000274030 MRPL49Q13405 166 aaKnown RBP10.89□□□□□ -0.67
USP53-201ENST00000274030 ZNF709Q8N972 641 aa10.89□□□□□ -0.67
USP53-201ENST00000274030 NPRL2Q8WTW4 380 aa10.89□□□□□ -0.67
USP53-201ENST00000274030 RHBDF1Q96CC6 855 aa10.89□□□□□ -0.67
USP53-201ENST00000274030 L3HYPDHQ96EM0 354 aa10.89□□□□□ -0.67
USP53-201ENST00000274030 SLC41A3Q96GZ6 507 aa10.89□□□□□ -0.67
USP53-201ENST00000274030 ARMC1Q9NVT9 282 aa10.89□□□□□ -0.67
USP53-201ENST00000274030 SMCO3A2RU48 225 aa10.88□□□□□ -0.67
USP53-201ENST00000274030 PRKXP51817 358 aa10.88□□□□□ -0.67
USP53-201ENST00000274030 HOXC5Q00444 222 aa10.88□□□□□ -0.67
USP53-201ENST00000274030 CTC1Q2NKJ3 1217 aa10.88□□□□□ -0.67
USP53-201ENST00000274030 TBC1D15Q8TC07 691 aa10.88□□□□□ -0.67
USP53-201ENST00000274030 HS6ST2Q96MM7 605 aa10.88□□□□□ -0.67
USP53-201ENST00000274030 TMEM168Q9H0V1 697 aa10.88□□□□□ -0.67
USP53-201ENST00000274030 SYT4Q9H2B2 425 aa10.88□□□□□ -0.67
USP53-201ENST00000274030 TMEM14AQ9Y6G1 99 aa10.88□□□□□ -0.67
USP53-201ENST00000274030 CNOT4O95628 575 aaKnown RBP10.88□□□□□ -0.67
USP53-201ENST00000274030 PRLP01236 227 aa10.88□□□□□ -0.67
USP53-201ENST00000274030 EDN1P05305 212 aa10.88□□□□□ -0.67
USP53-201ENST00000274030 AKR1C4P17516 323 aa10.88□□□□□ -0.67
USP53-201ENST00000274030 GRM7Q14831 915 aa10.88□□□□□ -0.67
USP53-201ENST00000274030 RGNQ15493 299 aa10.88□□□□□ -0.67
USP53-201ENST00000274030 DEFB133Q30KQ1 61 aa10.88□□□□□ -0.67
USP53-201ENST00000274030 RPL13AP3Q6NVV1 102 aa10.88□□□□□ -0.67
USP53-201ENST00000274030 CYS1Q717R9 158 aa10.88□□□□□ -0.67
USP53-201ENST00000274030 RAB11FIP2Q7L804 512 aa10.88□□□□□ -0.67
USP53-201ENST00000274030 HSD11B1LQ7Z5J1 315 aa10.88□□□□□ -0.67
USP53-201ENST00000274030 PLXDC1Q8IUK5 500 aa10.88□□□□□ -0.67
USP53-201ENST00000274030 LMNTD1Q8N9Z9 388 aa10.88□□□□□ -0.67
USP53-201ENST00000274030 SAMD11Q96NU1 681 aa10.88□□□□□ -0.67
USP53-201ENST00000274030 TMEM121BQ9BXQ6 578 aaPredicted RBP10.88□□□□□ -0.67
USP53-201ENST00000274030 KCNK13Q9HB14 408 aa10.88□□□□□ -0.67
USP53-201ENST00000274030 IL17CQ9P0M4 197 aa10.88□□□□□ -0.67
USP53-201ENST00000274030 M0QZQ0 153 aa10.88□□□□□ -0.67
USP53-201ENST00000274030 OPN1LWP04000 364 aa10.88□□□□□ -0.67
USP53-201ENST00000274030 ZNF888P0CJ79 500 aaPredicted RBP10.88□□□□□ -0.67
USP53-201ENST00000274030 DEFB103AP81534 67 aa10.88□□□□□ -0.67
USP53-201ENST00000274030 DLX2Q07687 328 aaPredicted RBP10.88□□□□□ -0.67
USP53-201ENST00000274030 SQSTM1Q13501 440 aa10.88□□□□□ -0.67
USP53-201ENST00000274030 FAM205BPQ63HN1 556 aa10.88□□□□□ -0.67
USP53-201ENST00000274030 MARVELD2Q8N4S9 558 aa10.88□□□□□ -0.67
USP53-201ENST00000274030 FAM3CQ92520 227 aa10.88□□□□□ -0.67
USP53-201ENST00000274030 MGAT4CQ9UBM8 478 aa10.88□□□□□ -0.67
USP53-201ENST00000274030 B4GALT7Q9UBV7 327 aa10.88□□□□□ -0.67
USP53-201ENST00000274030 DNMT3AQ9Y6K1 912 aaPredicted RBP10.88□□□□□ -0.67
USP53-201ENST00000274030 DLG5Q8TDM6 1919 aa10.88□□□□□ -0.67
USP53-201ENST00000274030 LMO7Q8WWI1 1683 aa10.88□□□□□ -0.67
USP53-201ENST00000274030 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.88□□□□□ -0.67
USP53-201ENST00000274030 CNMDO75829 334 aa10.88□□□□□ -0.67
USP53-201ENST00000274030 GKN3PP0CG01 181 aa10.88□□□□□ -0.67
USP53-201ENST00000274030 MAGEA3P43357 314 aa10.88□□□□□ -0.67
USP53-201ENST00000274030 RPS15P62841 145 aaKnown RBP10.88□□□□□ -0.67
USP53-201ENST00000274030 SMAD2Q15796 467 aaKnown RBP10.88□□□□□ -0.67
USP53-201ENST00000274030 HES5Q5TA89 166 aa10.88□□□□□ -0.67
USP53-201ENST00000274030 ARHGAP11AQ6P4F7 1023 aa10.88□□□□□ -0.67
USP53-201ENST00000274030 LRRN1Q6UXK5 716 aa10.88□□□□□ -0.67
USP53-201ENST00000274030 TOR1AIP2Q8NFQ8 470 aa10.88□□□□□ -0.67
USP53-201ENST00000274030 NEIL2Q969S2 332 aa10.88□□□□□ -0.67
USP53-201ENST00000274030 LPAR4Q99677 370 aa10.88□□□□□ -0.67
USP53-201ENST00000274030 URM1Q9BTM9 101 aaKnown RBP10.88□□□□□ -0.67
USP53-201ENST00000274030 CPEB1Q9BZB8 566 aaKnown RBP10.88□□□□□ -0.67
USP53-201ENST00000274030 CCDC86Q9H6F5 360 aaKnown RBP10.88□□□□□ -0.67
USP53-201ENST00000274030 PDLIM7Q9NR12 457 aa10.88□□□□□ -0.67
USP53-201ENST00000274030 TMEM184CQ9NVA4 438 aa10.88□□□□□ -0.67
USP53-201ENST00000274030 USP36Q9P275 1121 aaKnown RBP10.88□□□□□ -0.67
USP53-201ENST00000274030 MON2Q7Z3U7 1717 aa10.88□□□□□ -0.67
USP53-201ENST00000274030 MYH8P13535 1937 aa10.88□□□□□ -0.67
USP53-201ENST00000274030 EEF1E1-BLOC1S5C9J1V9 151 aa10.88□□□□□ -0.67
USP53-201ENST00000274030 ARL3P36405 182 aa10.88□□□□□ -0.67
USP53-201ENST00000274030 LSSP48449 732 aa10.88□□□□□ -0.67
USP53-201ENST00000274030 HLCSP50747 726 aa10.88□□□□□ -0.67
USP53-201ENST00000274030 RCAN2Q14206 197 aa10.88□□□□□ -0.67
USP53-201ENST00000274030 RBM39Q14498 530 aaKnown RBP10.88□□□□□ -0.67
USP53-201ENST00000274030 LDLRAD1Q5T700 205 aa10.88□□□□□ -0.67
USP53-201ENST00000274030 GPR137CQ8N3F9 429 aa10.88□□□□□ -0.67
USP53-201ENST00000274030 RNF175Q8N4F7 328 aa10.88□□□□□ -0.67
USP53-201ENST00000274030 DTWD1Q8N5C7 304 aa10.88□□□□□ -0.67
USP53-201ENST00000274030 MYRFLQ96LU7 910 aa10.88□□□□□ -0.67
USP53-201ENST00000274030 UHRF1Q96T88 793 aaPredicted RBP10.88□□□□□ -0.67
USP53-201ENST00000274030 ZFYVE21Q9BQ24 234 aa10.88□□□□□ -0.67
USP53-201ENST00000274030 HINT2Q9BX68 163 aa10.88□□□□□ -0.67
USP53-201ENST00000274030 ALOXE3Q9BYJ1 711 aa10.88□□□□□ -0.67
USP53-201ENST00000274030 KATNBL1Q9H079 304 aa10.88□□□□□ -0.67
USP53-201ENST00000274030 WDR6Q9NNW5 1121 aaKnown RBP10.88□□□□□ -0.67
USP53-201ENST00000274030 VDAC3Q9Y277 283 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms