RNA–Protein interactions for RNA: ENST00000270061.11

SSBP4-201, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP4, Length 1,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-201ENST00000270061 GIMAP4Q9NUV9 329 aa22.97■■□□□ 1.27
SSBP4-201ENST00000270061 RPS6KA6Q9UK32 745 aa22.97■■□□□ 1.27
SSBP4-201ENST00000270061 TNRC6AQ8NDV7 1962 aaKnown RBP22.97■■□□□ 1.27
SSBP4-201ENST00000270061 TPST1O60507 370 aa22.96■■□□□ 1.27
SSBP4-201ENST00000270061 GALR3O60755 368 aaPredicted RBP22.96■■□□□ 1.27
SSBP4-201ENST00000270061 ERAL1O75616 437 aaKnown RBP22.96■■□□□ 1.27
SSBP4-201ENST00000270061 DNAJB5O75953 348 aa22.96■■□□□ 1.27
SSBP4-201ENST00000270061 LDLRP01130 860 aa22.96■■□□□ 1.27
SSBP4-201ENST00000270061 PLA2G2AP14555 144 aa22.96■■□□□ 1.27
SSBP4-201ENST00000270061 CPN2P22792 545 aa22.96■■□□□ 1.27
SSBP4-201ENST00000270061 TLX1P31314 330 aaPredicted RBP22.96■■□□□ 1.27
SSBP4-201ENST00000270061 MAGEA8P43361 318 aa22.96■■□□□ 1.27
SSBP4-201ENST00000270061 NCBP2P52298 156 aaKnown RBP eCLIP22.96■■□□□ 1.27
SSBP4-201ENST00000270061 AQP4P55087 323 aa22.96■■□□□ 1.27
SSBP4-201ENST00000270061 FKBP9P1Q75LS8 142 aa22.96■■□□□ 1.27
SSBP4-201ENST00000270061 PRICKLE2Q7Z3G6 844 aa22.96■■□□□ 1.27
SSBP4-201ENST00000270061 SAMD14Q8IZD0 417 aaPredicted RBP22.96■■□□□ 1.27
SSBP4-201ENST00000270061 ICA1LQ8NDH6 482 aa22.96■■□□□ 1.27
SSBP4-201ENST00000270061 OR2Y1Q8NGV0 311 aa22.96■■□□□ 1.27
SSBP4-201ENST00000270061 SUN3Q8TAQ9 357 aa22.96■■□□□ 1.27
SSBP4-201ENST00000270061 ING2Q9H160 280 aa22.96■■□□□ 1.27
SSBP4-201ENST00000270061 SLC22A11Q9NSA0 550 aa22.96■■□□□ 1.27
SSBP4-201ENST00000270061 LRCH1Q9Y2L9 728 aa22.96■■□□□ 1.27
SSBP4-201ENST00000270061 MAP4K5Q9Y4K4 846 aa22.96■■□□□ 1.27
SSBP4-201ENST00000270061 V9GYQ6 96 aa22.96■■□□□ 1.27
SSBP4-201ENST00000270061 CCT3P49368 545 aaKnown RBP22.96■■□□□ 1.27
SSBP4-201ENST00000270061 EEF1A2Q05639 463 aaKnown RBP22.96■■□□□ 1.27
SSBP4-201ENST00000270061 SSPNQ14714 243 aa22.96■■□□□ 1.27
SSBP4-201ENST00000270061 NKG7Q16617 165 aa22.96■■□□□ 1.27
SSBP4-201ENST00000270061 ZNF630Q2M218 657 aaPredicted RBP22.96■■□□□ 1.27
SSBP4-201ENST00000270061 CBLL1Q75N03 491 aa22.96■■□□□ 1.27
SSBP4-201ENST00000270061 C6orf120Q7Z4R8 191 aa22.96■■□□□ 1.27
SSBP4-201ENST00000270061 SLC30A8Q8IWU4 369 aa22.96■■□□□ 1.27
SSBP4-201ENST00000270061 FKBP10Q96AY3 582 aa22.96■■□□□ 1.27
SSBP4-201ENST00000270061 SEMA3GQ9NS98 782 aa22.96■■□□□ 1.27
SSBP4-201ENST00000270061 ZNF780BQ9Y6R6 833 aa22.96■■□□□ 1.27
SSBP4-201ENST00000270061 NUP210LQ5VU65 1888 aa22.95■■□□□ 1.26
SSBP4-201ENST00000270061 PRSS23O95084 383 aa22.95■■□□□ 1.26
SSBP4-201ENST00000270061 ONECUT2O95948 504 aa22.95■■□□□ 1.26
SSBP4-201ENST00000270061 OTX2P32243 289 aa22.95■■□□□ 1.26
SSBP4-201ENST00000270061 MPIP34949 423 aa22.95■■□□□ 1.26
SSBP4-201ENST00000270061 PRIM2P49643 509 aa22.95■■□□□ 1.26
SSBP4-201ENST00000270061 CHAF1BQ13112 559 aa22.95■■□□□ 1.26
SSBP4-201ENST00000270061 ELOAQ14241 798 aaKnown RBP22.95■■□□□ 1.26
SSBP4-201ENST00000270061 SWT1Q5T5J6 900 aaKnown RBP22.95■■□□□ 1.26
SSBP4-201ENST00000270061 INTS11Q5TA45 600 aaKnown RBP22.95■■□□□ 1.26
SSBP4-201ENST00000270061 OR52E8Q6IFG1 317 aa22.95■■□□□ 1.26
SSBP4-201ENST00000270061 CCDC80Q76M96 950 aa22.95■■□□□ 1.26
SSBP4-201ENST00000270061 EIF3MQ7L2H7 374 aaKnown RBP22.95■■□□□ 1.26
SSBP4-201ENST00000270061 METTL27Q8N6F8 245 aaPredicted RBP22.95■■□□□ 1.26
SSBP4-201ENST00000270061 SFXN5Q8TD22 340 aa22.95■■□□□ 1.26
SSBP4-201ENST00000270061 BDH2Q9BUT1 245 aa22.95■■□□□ 1.26
SSBP4-201ENST00000270061 COQ10BQ9H8M1 238 aa22.95■■□□□ 1.26
SSBP4-201ENST00000270061 C8orf4Q9NR00 106 aa22.95■■□□□ 1.26
SSBP4-201ENST00000270061 TP53TG5Q9Y2B4 290 aa22.95■■□□□ 1.26
SSBP4-201ENST00000270061 SPACA6W5XKT8 324 aa22.95■■□□□ 1.26
SSBP4-201ENST00000270061 CLOCKO15516 846 aa22.94■■□□□ 1.26
SSBP4-201ENST00000270061 SLC28A2O43868 658 aa22.94■■□□□ 1.26
SSBP4-201ENST00000270061 CNOT3O75175 753 aaKnown RBP22.94■■□□□ 1.26
SSBP4-201ENST00000270061 ALBP02768 609 aa22.94■■□□□ 1.26
SSBP4-201ENST00000270061 ARAFP10398 606 aa22.94■■□□□ 1.26
SSBP4-201ENST00000270061 PPP4R4Q6NUP7 873 aa22.94■■□□□ 1.26
SSBP4-201ENST00000270061 NIPAL1Q6NVV3 410 aa22.94■■□□□ 1.26
SSBP4-201ENST00000270061 OVCH1Q7RTY7 1134 aa22.94■■□□□ 1.26
SSBP4-201ENST00000270061 ZDHHC19Q8WVZ1 309 aaPredicted RBP22.94■■□□□ 1.26
SSBP4-201ENST00000270061 MAL2Q969L2 176 aa22.94■■□□□ 1.26
SSBP4-201ENST00000270061 MOAP1Q96BY2 351 aa22.94■■□□□ 1.26
SSBP4-201ENST00000270061 IP6K3Q96PC2 410 aa22.94■■□□□ 1.26
SSBP4-201ENST00000270061 NAALAD2Q9Y3Q0 740 aa22.94■■□□□ 1.26
SSBP4-201ENST00000270061 SCN3AQ9NY46 2000 aa22.94■■□□□ 1.26
SSBP4-201ENST00000270061 B4GALT2O60909 372 aa22.94■■□□□ 1.26
SSBP4-201ENST00000270061 DEAF1O75398 565 aaPredicted RBP22.94■■□□□ 1.26
SSBP4-201ENST00000270061 GPC1P35052 558 aa22.94■■□□□ 1.26
SSBP4-201ENST00000270061 OR1D4P47884 311 aa22.94■■□□□ 1.26
SSBP4-201ENST00000270061 DSTNP60981 165 aa22.94■■□□□ 1.26
SSBP4-201ENST00000270061 SPDYE7PQ495Y7 208 aa22.94■■□□□ 1.26
SSBP4-201ENST00000270061 LRRC23Q53EV4 343 aaPredicted RBP22.94■■□□□ 1.26
SSBP4-201ENST00000270061 TCTN3Q6NUS6 607 aa22.94■■□□□ 1.26
SSBP4-201ENST00000270061 CCDC116Q8IYX3 515 aa22.94■■□□□ 1.26
SSBP4-201ENST00000270061 PACRGLQ8N7B6 248 aa22.94■■□□□ 1.26
SSBP4-201ENST00000270061 THUMPD1Q9NXG2 353 aaKnown RBP22.94■■□□□ 1.26
SSBP4-201ENST00000270061 MAU2Q9Y6X3 613 aa22.94■■□□□ 1.26
SSBP4-201ENST00000270061 MED26O95402 600 aa22.93■■□□□ 1.26
SSBP4-201ENST00000270061 MAGEA2P43356 314 aa22.93■■□□□ 1.26
SSBP4-201ENST00000270061 HSPA13P48723 471 aa22.93■■□□□ 1.26
SSBP4-201ENST00000270061 CCL11P51671 97 aa22.93■■□□□ 1.26
SSBP4-201ENST00000270061 EMP3P54852 163 aa22.93■■□□□ 1.26
SSBP4-201ENST00000270061 RRADP55042 308 aa22.93■■□□□ 1.26
SSBP4-201ENST00000270061 FOXL2P58012 376 aa22.93■■□□□ 1.26
SSBP4-201ENST00000270061 ATP1A4Q13733 1029 aa22.93■■□□□ 1.26
SSBP4-201ENST00000270061 SCARB2Q14108 478 aa22.93■■□□□ 1.26
SSBP4-201ENST00000270061 BHLHB9Q6PI77 547 aa22.93■■□□□ 1.26
SSBP4-201ENST00000270061 MED25Q71SY5 747 aa22.93■■□□□ 1.26
SSBP4-201ENST00000270061 PRSS41Q7RTY9 318 aa22.93■■□□□ 1.26
SSBP4-201ENST00000270061 CIB1Q99828 191 aa22.93■■□□□ 1.26
SSBP4-201ENST00000270061 C9orf16Q9BUW7 83 aa22.93■■□□□ 1.26
SSBP4-201ENST00000270061 WDR54Q9H977 334 aa22.93■■□□□ 1.26
SSBP4-201ENST00000270061 PCSK5Q92824 1860 aa22.92■■□□□ 1.26
SSBP4-201ENST00000270061 SUV39H1O43463 412 aa22.92■■□□□ 1.26
SSBP4-201ENST00000270061 DNAJB6O75190 326 aa22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms