RNA–Protein interactions for RNA: ENST00000269228.9

NPC1-201, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPC1, Length 5,157 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-201ENST00000269228 ZNF740Q8NDX6 193 aa12.97□□□□□ -0.33
NPC1-201ENST00000269228 FGF22Q9HCT0 170 aa12.97□□□□□ -0.33
NPC1-201ENST00000269228 CEP290O15078 2479 aa12.97□□□□□ -0.33
NPC1-201ENST00000269228 RP1L1Q8IWN7 2480 aaPredicted RBP12.97□□□□□ -0.33
NPC1-201ENST00000269228 SLC22A1O15245 554 aa12.97□□□□□ -0.33
NPC1-201ENST00000269228 FRS3O43559 492 aa12.97□□□□□ -0.33
NPC1-201ENST00000269228 TGFBR2P37173 567 aa12.97□□□□□ -0.33
NPC1-201ENST00000269228 MS4A2Q01362 244 aa12.97□□□□□ -0.33
NPC1-201ENST00000269228 RASSF6Q6ZTQ3 369 aa12.97□□□□□ -0.33
NPC1-201ENST00000269228 GID4Q8IVV7 300 aa12.97□□□□□ -0.33
NPC1-201ENST00000269228 METTL2AQ96IZ6 378 aaKnown RBP12.97□□□□□ -0.33
NPC1-201ENST00000269228 CUTCQ9NTM9 273 aa12.97□□□□□ -0.33
NPC1-201ENST00000269228 AP1M2Q9Y6Q5 423 aa12.97□□□□□ -0.33
NPC1-201ENST00000269228 ENPP4Q9Y6X5 453 aa12.97□□□□□ -0.33
NPC1-201ENST00000269228 SAGE2PA6NJ88 616 aa12.97□□□□□ -0.33
NPC1-201ENST00000269228 NPRL3Q12980 569 aa12.97□□□□□ -0.33
NPC1-201ENST00000269228 RPL13AP3Q6NVV1 102 aa12.97□□□□□ -0.33
NPC1-201ENST00000269228 NRMQ8IXM6 262 aa12.97□□□□□ -0.33
NPC1-201ENST00000269228 MFSD2AQ8NA29 543 aa12.97□□□□□ -0.33
NPC1-201ENST00000269228 FOXQ1Q9C009 403 aa12.97□□□□□ -0.33
NPC1-201ENST00000269228 TIMMDC1Q9NPL8 285 aa12.97□□□□□ -0.33
NPC1-201ENST00000269228 TRAPPC13A5PLN9 417 aa12.97□□□□□ -0.33
NPC1-201ENST00000269228 SORBS2O94875 1100 aaKnown RBP12.97□□□□□ -0.33
NPC1-201ENST00000269228 NDUFV2P19404 249 aa12.97□□□□□ -0.33
NPC1-201ENST00000269228 AP3S2P59780 193 aa12.97□□□□□ -0.33
NPC1-201ENST00000269228 ARFRP1Q13795 201 aa12.97□□□□□ -0.33
NPC1-201ENST00000269228 CLCA4Q14CN2 919 aa12.97□□□□□ -0.33
NPC1-201ENST00000269228 AFMIDQ63HM1 303 aa12.97□□□□□ -0.33
NPC1-201ENST00000269228 CGB2Q6NT52 195 aa12.97□□□□□ -0.33
NPC1-201ENST00000269228 ZNF283Q8N7M2 679 aa12.97□□□□□ -0.33
NPC1-201ENST00000269228 OR14L1PQ8NHC6 308 aa12.97□□□□□ -0.33
NPC1-201ENST00000269228 C1orf216Q8TAB5 229 aa12.97□□□□□ -0.33
NPC1-201ENST00000269228 TCTN2Q96GX1 697 aa12.97□□□□□ -0.33
NPC1-201ENST00000269228 FAM46AQ96IP4 442 aaKnown RBP12.97□□□□□ -0.33
NPC1-201ENST00000269228 C20orf27Q9GZN8 174 aa12.97□□□□□ -0.33
NPC1-201ENST00000269228 PDFQ9HBH1 243 aa12.97□□□□□ -0.33
NPC1-201ENST00000269228 DIABLOQ9NR28 239 aa12.97□□□□□ -0.33
NPC1-201ENST00000269228 IL37Q9NZH6 218 aa12.97□□□□□ -0.33
NPC1-201ENST00000269228 RBMX2Q9Y388 322 aaKnown RBP12.97□□□□□ -0.33
NPC1-201ENST00000269228 A0A1B0GVI7 797 aa12.96□□□□□ -0.33
NPC1-201ENST00000269228 ZNF208O43345 1280 aa12.96□□□□□ -0.33
NPC1-201ENST00000269228 CCSMST1Q4G0I0 132 aa12.96□□□□□ -0.33
NPC1-201ENST00000269228 RAB43Q86YS6 212 aa12.96□□□□□ -0.33
NPC1-201ENST00000269228 C19orf47Q8N9M1 422 aaKnown RBP12.96□□□□□ -0.33
NPC1-201ENST00000269228 OR1E3Q8WZA6 343 aa12.96□□□□□ -0.33
NPC1-201ENST00000269228 UPB1Q9UBR1 384 aa12.96□□□□□ -0.33
NPC1-201ENST00000269228 COL11A2P13942 1736 aaPredicted RBP12.96□□□□□ -0.33
NPC1-201ENST00000269228 VSTM5A8MXK1 200 aa12.96□□□□□ -0.33
NPC1-201ENST00000269228 H3BSA7 217 aa12.96□□□□□ -0.33
NPC1-201ENST00000269228 OR7A17O14581 309 aa12.96□□□□□ -0.33
NPC1-201ENST00000269228 SRPX2O60687 465 aaPredicted RBP12.96□□□□□ -0.33
NPC1-201ENST00000269228 CBX5P45973 191 aa12.96□□□□□ -0.33
NPC1-201ENST00000269228 CTBP2P56545 445 aa12.96□□□□□ -0.33
NPC1-201ENST00000269228 PLP2Q04941 152 aa12.96□□□□□ -0.33
NPC1-201ENST00000269228 PIN1Q13526 163 aaPredicted RBP12.96□□□□□ -0.33
NPC1-201ENST00000269228 ZNF554Q86TJ5 538 aa12.96□□□□□ -0.33
NPC1-201ENST00000269228 MFSD9Q8NBP5 474 aa12.96□□□□□ -0.33
NPC1-201ENST00000269228 AGBL5Q8NDL9 886 aa12.96□□□□□ -0.33
NPC1-201ENST00000269228 OR2L3Q8NG85 312 aa12.96□□□□□ -0.33
NPC1-201ENST00000269228 OR52R1Q8NGF1 315 aa12.96□□□□□ -0.33
NPC1-201ENST00000269228 SLC41A3Q96GZ6 507 aa12.96□□□□□ -0.33
NPC1-201ENST00000269228 EPHX3Q9H6B9 360 aa12.96□□□□□ -0.33
NPC1-201ENST00000269228 TMEM45AQ9NWC5 275 aa12.96□□□□□ -0.33
NPC1-201ENST00000269228 PCDHGB5Q9Y5G0 923 aa12.96□□□□□ -0.33
NPC1-201ENST00000269228 HS3ST3A1Q9Y663 406 aa12.96□□□□□ -0.33
NPC1-201ENST00000269228 SHANK3Q9BYB0 1731 aa12.96□□□□□ -0.33
NPC1-201ENST00000269228 TMEM202A6NGA9 273 aa12.96□□□□□ -0.33
NPC1-201ENST00000269228 H0YAE9 185 aa12.96□□□□□ -0.33
NPC1-201ENST00000269228 NOS1APO75052 506 aaPredicted RBP12.96□□□□□ -0.33
NPC1-201ENST00000269228 OR8J1Q8NGP2 316 aa12.96□□□□□ -0.33
NPC1-201ENST00000269228 PROKR1Q8TCW9 393 aa12.96□□□□□ -0.33
NPC1-201ENST00000269228 CDS1Q92903 461 aa12.96□□□□□ -0.33
NPC1-201ENST00000269228 EURLQ9NYK6 297 aa12.96□□□□□ -0.33
NPC1-201ENST00000269228 IL20RAQ9UHF4 553 aa12.96□□□□□ -0.33
NPC1-201ENST00000269228 EXOSC1Q9Y3B2 195 aaKnown RBP12.96□□□□□ -0.33
NPC1-201ENST00000269228 GXYLT2A0PJZ3 443 aa12.96□□□□□ -0.34
NPC1-201ENST00000269228 SMIM30A4D0T7 59 aa12.96□□□□□ -0.34
NPC1-201ENST00000269228 ABCB7O75027 752 aa12.96□□□□□ -0.34
NPC1-201ENST00000269228 OXSR1O95747 527 aaPredicted RBP12.96□□□□□ -0.34
NPC1-201ENST00000269228 SRFP11831 508 aa12.96□□□□□ -0.34
NPC1-201ENST00000269228 CR2P20023 1033 aa12.96□□□□□ -0.34
NPC1-201ENST00000269228 ZNF84P51523 738 aa12.96□□□□□ -0.34
NPC1-201ENST00000269228 TRA2BP62995 288 aaKnown RBP12.96□□□□□ -0.34
NPC1-201ENST00000269228 ADAM8P78325 824 aa12.96□□□□□ -0.34
NPC1-201ENST00000269228 MAT1AQ00266 395 aaKnown RBP12.96□□□□□ -0.34
NPC1-201ENST00000269228 SRYQ05066 204 aa12.96□□□□□ -0.34
NPC1-201ENST00000269228 NKAIN2Q5VXU1 208 aa12.96□□□□□ -0.34
NPC1-201ENST00000269228 Q6ZNB5 142 aa12.96□□□□□ -0.34
NPC1-201ENST00000269228 SLCO4C1Q6ZQN7 724 aa12.96□□□□□ -0.34
NPC1-201ENST00000269228 GOLM1Q8NBJ4 401 aa12.96□□□□□ -0.34
NPC1-201ENST00000269228 TBC1D20Q96BZ9 403 aa12.96□□□□□ -0.34
NPC1-201ENST00000269228 HHATLQ9HCP6 504 aa12.96□□□□□ -0.34
NPC1-201ENST00000269228 ATXN7L1Q9ULK2 861 aaPredicted RBP12.96□□□□□ -0.34
NPC1-201ENST00000269228 EFCAB7A8K855 629 aa12.95□□□□□ -0.34
NPC1-201ENST00000269228 TMX2-CTNND1H3BSU7 103 aa12.95□□□□□ -0.34
NPC1-201ENST00000269228 GPR75O95800 540 aa12.95□□□□□ -0.34
NPC1-201ENST00000269228 HPRP00739 348 aa12.95□□□□□ -0.34
NPC1-201ENST00000269228 PRKCAP17252 672 aa12.95□□□□□ -0.34
NPC1-201ENST00000269228 SLC15A1P46059 708 aa12.95□□□□□ -0.34
NPC1-201ENST00000269228 FGL2Q14314 439 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms