RNA–Protein interactions for RNA: ENST00000263187.3

MSH4-201, Transcript of mutS homolog 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH4, Length 3,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4-201ENST00000263187 THOC7Q6I9Y2 204 aaKnown RBP8.6□□□□□ -1.03
MSH4-201ENST00000263187 CNIH2Q6PI25 160 aa8.6□□□□□ -1.03
MSH4-201ENST00000263187 HSDL2Q6YN16 418 aa8.6□□□□□ -1.03
MSH4-201ENST00000263187 LRRTM4Q86VH4 590 aa8.6□□□□□ -1.03
MSH4-201ENST00000263187 TRIM69Q86WT6 500 aa8.6□□□□□ -1.03
MSH4-201ENST00000263187 LINC01555Q8NAE3 123 aa8.6□□□□□ -1.03
MSH4-201ENST00000263187 SLC25A46Q96AG3 418 aa8.6□□□□□ -1.03
MSH4-201ENST00000263187 RSPRY1Q96DX4 576 aa8.6□□□□□ -1.03
MSH4-201ENST00000263187 ZBED6CLQ96FA7 236 aaPredicted RBP8.6□□□□□ -1.03
MSH4-201ENST00000263187 C12orf66Q96MD2 445 aa8.6□□□□□ -1.03
MSH4-201ENST00000263187 KCTD7Q96MP8 289 aa8.6□□□□□ -1.03
MSH4-201ENST00000263187 C19orf43Q9BQ61 176 aa8.6□□□□□ -1.03
MSH4-201ENST00000263187 CCDC32Q9BV29 185 aa8.6□□□□□ -1.03
MSH4-201ENST00000263187 MS4A8Q9BY19 250 aa8.6□□□□□ -1.03
MSH4-201ENST00000263187 OR52A5Q9H2C5 316 aa8.6□□□□□ -1.03
MSH4-201ENST00000263187 P2RX2Q9UBL9 471 aa8.6□□□□□ -1.03
MSH4-201ENST00000263187 ATG4BQ9Y4P1 393 aa8.6□□□□□ -1.03
MSH4-201ENST00000263187 TRPM6Q9BX84 2022 aa8.59□□□□□ -1.03
MSH4-201ENST00000263187 CFAP54Q96N23 3096 aa8.59□□□□□ -1.03
MSH4-201ENST00000263187 A0A1W2PPK0 400 aa8.59□□□□□ -1.03
MSH4-201ENST00000263187 B4DXG7 233 aa8.59□□□□□ -1.03
MSH4-201ENST00000263187 PLA2G10O15496 165 aa8.59□□□□□ -1.03
MSH4-201ENST00000263187 PAK4O96013 591 aaPredicted RBP8.59□□□□□ -1.03
MSH4-201ENST00000263187 NR2F6P10588 404 aa8.59□□□□□ -1.03
MSH4-201ENST00000263187 SNRPGP62308 76 aaKnown RBP8.59□□□□□ -1.03
MSH4-201ENST00000263187 ZNF57Q68EA5 555 aaPredicted RBP8.59□□□□□ -1.03
MSH4-201ENST00000263187 MTFR2Q6P444 385 aa8.59□□□□□ -1.03
MSH4-201ENST00000263187 NKAIN4Q8IVV8 208 aa8.59□□□□□ -1.03
MSH4-201ENST00000263187 Q8N402 240 aa8.59□□□□□ -1.03
MSH4-201ENST00000263187 TBC1D19Q8N5T2 526 aa8.59□□□□□ -1.03
MSH4-201ENST00000263187 PROKR2Q8NFJ6 384 aa8.59□□□□□ -1.03
MSH4-201ENST00000263187 LILRB4Q8NHJ6 448 aa8.59□□□□□ -1.03
MSH4-201ENST00000263187 BBS10Q8TAM1 723 aa8.59□□□□□ -1.03
MSH4-201ENST00000263187 METTL2AQ96IZ6 378 aaKnown RBP8.59□□□□□ -1.03
MSH4-201ENST00000263187 ZCCHC2Q9C0B9 1178 aaKnown RBP8.59□□□□□ -1.03
MSH4-201ENST00000263187 ENOPH1Q9UHY7 261 aa8.59□□□□□ -1.03
MSH4-201ENST00000263187 MAPRE3Q9UPY8 281 aa8.59□□□□□ -1.03
MSH4-201ENST00000263187 A0A075B6Q4 140 aa8.59□□□□□ -1.03
MSH4-201ENST00000263187 FAM25AB3EWG3 89 aa8.59□□□□□ -1.03
MSH4-201ENST00000263187 FAM25CB3EWG5 89 aa8.59□□□□□ -1.03
MSH4-201ENST00000263187 FAM25GB3EWG6 89 aa8.59□□□□□ -1.03
MSH4-201ENST00000263187 PAPLNO95428 1278 aa8.59□□□□□ -1.03
MSH4-201ENST00000263187 SLC2A2P11168 524 aaPredicted RBP8.59□□□□□ -1.03
MSH4-201ENST00000263187 ADH5P11766 374 aa8.59□□□□□ -1.03
MSH4-201ENST00000263187 CERS1P27544 350 aa8.59□□□□□ -1.03
MSH4-201ENST00000263187 PPP2R1BP30154 601 aa8.59□□□□□ -1.03
MSH4-201ENST00000263187 MAT2AP31153 395 aaKnown RBP8.59□□□□□ -1.03
MSH4-201ENST00000263187 TRHRP34981 398 aaPredicted RBP8.59□□□□□ -1.03
MSH4-201ENST00000263187 MTNR1AP48039 350 aa8.59□□□□□ -1.03
MSH4-201ENST00000263187 CCR8P51685 355 aa8.59□□□□□ -1.03
MSH4-201ENST00000263187 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.59□□□□□ -1.03
MSH4-201ENST00000263187 ARHGAP15Q53QZ3 475 aa8.59□□□□□ -1.03
MSH4-201ENST00000263187 FAM27D1Q5T7N8 215 aa8.59□□□□□ -1.03
MSH4-201ENST00000263187 DDI2Q5TDH0 399 aa8.59□□□□□ -1.03
MSH4-201ENST00000263187 ZNF438Q7Z4V0 828 aa8.59□□□□□ -1.03
MSH4-201ENST00000263187 NUDT13Q86X67 352 aa8.59□□□□□ -1.03
MSH4-201ENST00000263187 MARCH9Q86YJ5 346 aa8.59□□□□□ -1.03
MSH4-201ENST00000263187 KLBQ86Z14 1044 aa8.59□□□□□ -1.03
MSH4-201ENST00000263187 TMEM145Q8NBT3 493 aa8.59□□□□□ -1.03
MSH4-201ENST00000263187 C19orf18Q8NEA5 215 aa8.59□□□□□ -1.03
MSH4-201ENST00000263187 ANKK1Q8NFD2 765 aa8.59□□□□□ -1.03
MSH4-201ENST00000263187 OR2L2Q8NH16 312 aa8.59□□□□□ -1.03
MSH4-201ENST00000263187 TEX47Q8TBZ9 253 aa8.59□□□□□ -1.03
MSH4-201ENST00000263187 AMDHD1Q96NU7 426 aa8.59□□□□□ -1.03
MSH4-201ENST00000263187 AICDAQ9GZX7 198 aa8.59□□□□□ -1.03
MSH4-201ENST00000263187 SLC22A4Q9H015 551 aa8.59□□□□□ -1.03
MSH4-201ENST00000263187 TMEM245Q9H330 911 aa8.59□□□□□ -1.03
MSH4-201ENST00000263187 SYNPO2LQ9H987 977 aa8.59□□□□□ -1.03
MSH4-201ENST00000263187 C3orf14Q9HBI5 128 aa8.59□□□□□ -1.03
MSH4-201ENST00000263187 A4GALTQ9NPC4 353 aa8.59□□□□□ -1.03
MSH4-201ENST00000263187 B3GAT2Q9NPZ5 323 aa8.59□□□□□ -1.03
MSH4-201ENST00000263187 TRPV5Q9NQA5 729 aa8.59□□□□□ -1.03
MSH4-201ENST00000263187 SEMA4GQ9NTN9 838 aa8.59□□□□□ -1.03
MSH4-201ENST00000263187 SLC13A4Q9UKG4 626 aa8.59□□□□□ -1.03
MSH4-201ENST00000263187 ZNF106Q9H2Y7 1883 aaKnown RBP8.59□□□□□ -1.03
MSH4-201ENST00000263187 SPTBP11277 2137 aa8.59□□□□□ -1.03
MSH4-201ENST00000263187 SDK1Q7Z5N4 2213 aa8.58□□□□□ -1.04
MSH4-201ENST00000263187 TBC1D3BA6NDS4 549 aa8.58□□□□□ -1.04
MSH4-201ENST00000263187 SOCS6O14544 535 aa8.58□□□□□ -1.04
MSH4-201ENST00000263187 PTPN2P17706 415 aa8.58□□□□□ -1.04
MSH4-201ENST00000263187 KELP23276 732 aa8.58□□□□□ -1.04
MSH4-201ENST00000263187 MC3RP41968 323 aa8.58□□□□□ -1.04
MSH4-201ENST00000263187 INPP1P49441 399 aa8.58□□□□□ -1.04
MSH4-201ENST00000263187 WNT4P56705 351 aa8.58□□□□□ -1.04
MSH4-201ENST00000263187 FUT5Q11128 374 aa8.58□□□□□ -1.04
MSH4-201ENST00000263187 MLLT11Q13015 90 aaPredicted RBP8.58□□□□□ -1.04
MSH4-201ENST00000263187 ZNF311Q5JNZ3 666 aa8.58□□□□□ -1.04
MSH4-201ENST00000263187 C6orf132Q5T0Z8 1188 aa8.58□□□□□ -1.04
MSH4-201ENST00000263187 CCNJQ5T5M9 372 aa8.58□□□□□ -1.04
MSH4-201ENST00000263187 FAM46CQ5VWP2 391 aa8.58□□□□□ -1.04
MSH4-201ENST00000263187 TRIQKQ629K1 86 aa8.58□□□□□ -1.04
MSH4-201ENST00000263187 TMEFF1Q8IYR6 380 aa8.58□□□□□ -1.04
MSH4-201ENST00000263187 OR51G2Q8NGK0 314 aa8.58□□□□□ -1.04
MSH4-201ENST00000263187 OR9A2Q8NGT5 310 aa8.58□□□□□ -1.04
MSH4-201ENST00000263187 CXorf40AQ8TE69 158 aa8.58□□□□□ -1.04
MSH4-201ENST00000263187 UBE2E3Q969T4 207 aa8.58□□□□□ -1.04
MSH4-201ENST00000263187 MOV10Q9HCE1 1003 aaKnown RBP8.58□□□□□ -1.04
MSH4-201ENST00000263187 FZD3Q9NPG1 666 aa8.58□□□□□ -1.04
MSH4-201ENST00000263187 MBNL1Q9NR56 388 aaKnown RBP8.58□□□□□ -1.04
MSH4-201ENST00000263187 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms