RNA–Protein interactions for RNA: ENST00000262554.6

SPTLC1-201, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC1, Length 1,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-201ENST00000262554 FAM111BQ6SJ93 734 aa12.13□□□□□ -0.47
SPTLC1-201ENST00000262554 MAMSTRQ6ZN01 415 aa12.13□□□□□ -0.47
SPTLC1-201ENST00000262554 NLGN4XQ8N0W4 816 aa12.13□□□□□ -0.47
SPTLC1-201ENST00000262554 SLC35A4Q96G79 324 aa12.13□□□□□ -0.47
SPTLC1-201ENST00000262554 PHF7Q9BWX1 381 aaPredicted RBP12.13□□□□□ -0.47
SPTLC1-201ENST00000262554 ITPAQ9BY32 194 aa12.13□□□□□ -0.47
SPTLC1-201ENST00000262554 CACYBPQ9HB71 228 aaKnown RBP12.13□□□□□ -0.47
SPTLC1-201ENST00000262554 EVA1BQ9NVM1 165 aa12.13□□□□□ -0.47
SPTLC1-201ENST00000262554 GPR83Q9NYM4 423 aa12.13□□□□□ -0.47
SPTLC1-201ENST00000262554 PTGFRNQ9P2B2 879 aa12.13□□□□□ -0.47
SPTLC1-201ENST00000262554 TDRD6O60522 2096 aaKnown RBP12.13□□□□□ -0.47
SPTLC1-201ENST00000262554 OR5K3A6NET4 321 aa12.12□□□□□ -0.47
SPTLC1-201ENST00000262554 EFCAB10A6NFE3 127 aa12.12□□□□□ -0.47
SPTLC1-201ENST00000262554 ZNF860A6NHJ4 632 aa12.12□□□□□ -0.47
SPTLC1-201ENST00000262554 M0R129 80 aa12.12□□□□□ -0.47
SPTLC1-201ENST00000262554 TLR4O00206 839 aa12.12□□□□□ -0.47
SPTLC1-201ENST00000262554 FOXD2O60548 495 aaPredicted RBP12.12□□□□□ -0.47
SPTLC1-201ENST00000262554 TPST2O60704 377 aa12.12□□□□□ -0.47
SPTLC1-201ENST00000262554 CHRNB1P11230 501 aa12.12□□□□□ -0.47
SPTLC1-201ENST00000262554 PORP16435 677 aaPredicted RBP12.12□□□□□ -0.47
SPTLC1-201ENST00000262554 C21orf33P30042 268 aaPredicted RBP12.12□□□□□ -0.47
SPTLC1-201ENST00000262554 OLR1P78380 273 aa12.12□□□□□ -0.47
SPTLC1-201ENST00000262554 COX10Q12887 443 aa12.12□□□□□ -0.47
SPTLC1-201ENST00000262554 MOGQ16653 247 aa12.12□□□□□ -0.47
SPTLC1-201ENST00000262554 HEPHL1Q6MZM0 1159 aa12.12□□□□□ -0.47
SPTLC1-201ENST00000262554 PARGQ86W56 976 aa12.12□□□□□ -0.47
SPTLC1-201ENST00000262554 SFTPA2Q8IWL1 248 aa12.12□□□□□ -0.47
SPTLC1-201ENST00000262554 OR4N5Q8IXE1 308 aa12.12□□□□□ -0.47
SPTLC1-201ENST00000262554 GJD3Q8N144 294 aa12.12□□□□□ -0.47
SPTLC1-201ENST00000262554 OR2L13Q8N349 312 aa12.12□□□□□ -0.47
SPTLC1-201ENST00000262554 TSTD1Q8NFU3 115 aa12.12□□□□□ -0.47
SPTLC1-201ENST00000262554 ZDHHC1Q8WTX9 485 aa12.12□□□□□ -0.47
SPTLC1-201ENST00000262554 TANKQ92844 425 aa12.12□□□□□ -0.47
SPTLC1-201ENST00000262554 CCDC3Q9BQI4 270 aa12.12□□□□□ -0.47
SPTLC1-201ENST00000262554 QRSL1Q9H0R6 528 aaKnown RBP12.12□□□□□ -0.47
SPTLC1-201ENST00000262554 C11orf16Q9NQ32 467 aa12.12□□□□□ -0.47
SPTLC1-201ENST00000262554 M0R3G1 203 aa12.12□□□□□ -0.47
SPTLC1-201ENST00000262554 DNAJB6O75190 326 aa12.12□□□□□ -0.47
SPTLC1-201ENST00000262554 ZNF217O75362 1048 aa12.12□□□□□ -0.47
SPTLC1-201ENST00000262554 SOX14O95416 240 aa12.12□□□□□ -0.47
SPTLC1-201ENST00000262554 STSP08842 583 aa12.12□□□□□ -0.47
SPTLC1-201ENST00000262554 PRKAR1BP31321 381 aa12.12□□□□□ -0.47
SPTLC1-201ENST00000262554 ALDH6A1Q02252 535 aaKnown RBP12.12□□□□□ -0.47
SPTLC1-201ENST00000262554 ST3GAL4Q11206 333 aa12.12□□□□□ -0.47
SPTLC1-201ENST00000262554 C1orf61Q13536 156 aa12.12□□□□□ -0.47
SPTLC1-201ENST00000262554 TDGQ13569 410 aa12.12□□□□□ -0.47
SPTLC1-201ENST00000262554 SLX4IPQ5VYV7 408 aa12.12□□□□□ -0.47
SPTLC1-201ENST00000262554 CASP12Q6UXS9 341 aa12.12□□□□□ -0.47
SPTLC1-201ENST00000262554 ZNF761Q86XN6 746 aaPredicted RBP12.12□□□□□ -0.47
SPTLC1-201ENST00000262554 CSNK1A1LQ8N752 337 aa12.12□□□□□ -0.47
SPTLC1-201ENST00000262554 SLC16A11Q8NCK7 471 aa12.12□□□□□ -0.47
SPTLC1-201ENST00000262554 B3GNT7Q8NFL0 401 aa12.12□□□□□ -0.47
SPTLC1-201ENST00000262554 OR4K5Q8NGD3 323 aa12.12□□□□□ -0.47
SPTLC1-201ENST00000262554 SLC9A6Q92581 669 aa12.12□□□□□ -0.47
SPTLC1-201ENST00000262554 CDS1Q92903 461 aa12.12□□□□□ -0.47
SPTLC1-201ENST00000262554 ARHGDIGQ99819 225 aa12.12□□□□□ -0.47
SPTLC1-201ENST00000262554 MAN2C1Q9NTJ4 1040 aa12.12□□□□□ -0.47
SPTLC1-201ENST00000262554 KLHL28Q9NXS3 571 aa12.12□□□□□ -0.47
SPTLC1-201ENST00000262554 CNOT2Q9NZN8 540 aaKnown RBP12.12□□□□□ -0.47
SPTLC1-201ENST00000262554 SELENONQ9NZV5 590 aa12.12□□□□□ -0.47
SPTLC1-201ENST00000262554 NDOR1Q9UHB4 597 aa12.12□□□□□ -0.47
SPTLC1-201ENST00000262554 MRPS2Q9Y399 296 aaKnown RBP12.12□□□□□ -0.47
SPTLC1-201ENST00000262554 SCN2AQ99250 2005 aa12.11□□□□□ -0.47
SPTLC1-201ENST00000262554 CLDN24A6NM45 220 aa12.11□□□□□ -0.47
SPTLC1-201ENST00000262554 CHURC1-FNTBB4DL54 471 aa12.11□□□□□ -0.47
SPTLC1-201ENST00000262554 CD36P16671 472 aa12.11□□□□□ -0.47
SPTLC1-201ENST00000262554 IFNA8P32881 189 aa12.11□□□□□ -0.47
SPTLC1-201ENST00000262554 EMP3P54852 163 aa12.11□□□□□ -0.47
SPTLC1-201ENST00000262554 VSX2P58304 361 aaPredicted RBP12.11□□□□□ -0.47
SPTLC1-201ENST00000262554 TAS2R41P59536 307 aa12.11□□□□□ -0.47
SPTLC1-201ENST00000262554 SNRPGP62308 76 aaKnown RBP12.11□□□□□ -0.47
SPTLC1-201ENST00000262554 ZNF829Q3KNS6 432 aaPredicted RBP12.11□□□□□ -0.47
SPTLC1-201ENST00000262554 INAVAQ3KP66 663 aa12.11□□□□□ -0.47
SPTLC1-201ENST00000262554 CD300LDQ6UXZ3 194 aa12.11□□□□□ -0.47
SPTLC1-201ENST00000262554 WDR53Q7Z5U6 358 aaPredicted RBP12.11□□□□□ -0.47
SPTLC1-201ENST00000262554 VRK2Q86Y07 508 aa12.11□□□□□ -0.47
SPTLC1-201ENST00000262554 OR52P1PQ8NH57 321 aa12.11□□□□□ -0.47
SPTLC1-201ENST00000262554 C9orf43Q8TAL5 461 aaPredicted RBP12.11□□□□□ -0.47
SPTLC1-201ENST00000262554 TRUB1Q8WWH5 349 aaKnown RBP12.11□□□□□ -0.47
SPTLC1-201ENST00000262554 SLC38A4Q969I6 547 aa12.11□□□□□ -0.47
SPTLC1-201ENST00000262554 BORCS5Q969J3 196 aa12.11□□□□□ -0.47
SPTLC1-201ENST00000262554 CRELD1Q96HD1 420 aa12.11□□□□□ -0.47
SPTLC1-201ENST00000262554 Q96MT0 163 aa12.11□□□□□ -0.47
SPTLC1-201ENST00000262554 TTYH1Q9H313 450 aaPredicted RBP12.11□□□□□ -0.47
SPTLC1-201ENST00000262554 SEMA6CQ9H3T2 930 aa12.11□□□□□ -0.47
SPTLC1-201ENST00000262554 LMAN1LQ9HAT1 526 aa12.11□□□□□ -0.47
SPTLC1-201ENST00000262554 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.11□□□□□ -0.47
SPTLC1-201ENST00000262554 SLC6A14Q9UN76 642 aa12.11□□□□□ -0.47
SPTLC1-201ENST00000262554 IFT52Q9Y366 437 aa12.11□□□□□ -0.47
SPTLC1-201ENST00000262554 B4DGG1 531 aa12.1□□□□□ -0.47
SPTLC1-201ENST00000262554 GALR3O60755 368 aaPredicted RBP12.1□□□□□ -0.47
SPTLC1-201ENST00000262554 GSTM3P21266 225 aa12.1□□□□□ -0.47
SPTLC1-201ENST00000262554 MMP11P24347 488 aa12.1□□□□□ -0.47
SPTLC1-201ENST00000262554 TGFBR2P37173 567 aa12.1□□□□□ -0.47
SPTLC1-201ENST00000262554 IFNGR2P38484 337 aa12.1□□□□□ -0.47
SPTLC1-201ENST00000262554 PDX1P52945 283 aa12.1□□□□□ -0.47
SPTLC1-201ENST00000262554 TIGD6Q17RP2 521 aa12.1□□□□□ -0.47
SPTLC1-201ENST00000262554 ARHGAP11BQ3KRB8 267 aa12.1□□□□□ -0.47
SPTLC1-201ENST00000262554 C12orf73Q69YU5 71 aa12.1□□□□□ -0.47
SPTLC1-201ENST00000262554 PRSS41Q7RTY9 318 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms